Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Davidsoniella_20virescens_20[genbank_20GCA_5F001513805.1_202016-01- 13] 561 sequences; 33,427,969 total letters Query= NC_008291.1 Length=198050 Score E Sequences producing significant alignments: (Bits) Value seq7 143 3e-29 >seq7 Length=77910 Score = 143 bits (158), Expect = 3e-29 Identities = 372/566 (66%), Gaps = 6/566 (1%) Strand=Plus/Minus Query 32652 AACATCAAACATGCGAAATCGCAGTGTAGACCCTCGTCTCTACTAATTAATTCGTTGGAA 32711 |||| ||| || || ||||| ||| | |||||| || | || | ||||| || Sbjct 73092 AACAACAAGCAAGCAAAATCTGTGTGCAAACCCTCATCACGGGAGATAAGCTCGTTAGAG 73033 Query 32712 AACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGATCCA 32771 || || || || ||||| || |||||||| ||||| || || || ||||| | ||| Sbjct 73032 AAGGTCAGACCAGGCATCAGACCACGCTTACGTAGCCAGAAGATAGAAGCAAAGGCACCA 72973 Query 32772 GAAAAGAAAATTCCTTCTACTGCCGCAAAGGCAATAAGTCTCTCTCCATAACCGG---CG 32828 || ||||| || || || || || |||||||||| || | || || | || | Sbjct 72972 GAGAAGAAGATACCCTCGACAGCAGCAAAGGCAACGAGACGCTGGCCGAAGGTGGATTCT 72913 Query 32829 CTGTCATGTATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATTGTCTCT 32888 ||||| |||||||| | |||||||| ||||| | || || || || || Sbjct 72912 CTGTCGCAAATCCACTTAAGGGCCCAATCAGCCTTACGGCGGATGCAGGGGATGGTGTCA 72853 Query 32889 ATAGCATTAAAGAGATAGtttttttCATTACTATCTTTAACATATGTATCAATCAAAAGA 32948 || || || || || || | | | | || || | || ||||| ||||| || Sbjct 72852 ATGGCGTTGAACAGGTATGTGCGCTGAGCAGGCTCCTTGATGTAAGTATCGATCAATAGG 72793 Query 32949 CTATACATTTCCGAATGAATGTTTTCAATGGCCATTTGAAATCCGTAGAAGCATCTAGCC 33008 || | || || || ||||| || || || || || ||||||||||| | |||| Sbjct 72792 GAGTAGGTCTCGGAGTGGATGTTCTCCATCATGATCTGGAAACCGTAGAAGCAGCGAGCC 72733 Query 33009 TCGGTAATCTGTACTTCTGTACAAAATCGTTCTGCTAAATTTTCATTCACTATTCCGTCA 33068 |||| ||||| || || | | || || || | | ||| || || || || || ||| Sbjct 72732 TCGGGGATCTGGACCTCACCAGAGAAACGCTCAACCAGATTCTCGTTGACAATACCATCA 72673 Query 33069 CTGGCTGCAAAAAACGCCAATACATGTTTTATAAAATATTTTTCGTCTGGTGTTA---GT 33125 ||| ||||| || |||| | || || || |||| ||||| |||| | Sbjct 72672 GAGGCAGCAAAGAAAGCCAGGATGTGGGAGATGAAGTATTGCTCGTCCTTGGTTAGACGG 72613 Query 33126 TTATTCCAATCATTGATATCTTTAGATATATCCACTTCTTCCACTGTCCAAAATGATGCC 33185 || ||||| || | || ||| || |||| ||| | || || | |||||||| |||||| Sbjct 72612 TTGTTCCAGTCGTGGAGATCCTTGGATAGATCAATCTCCTCAGCGGTCCAAAAAGATGCC 72553 Query 33186 TCTGCCTTTTTATACATATTCCAGAT 33211 || ||||| || ||||| | |||||| Sbjct 72552 TCGGCCTTCTTGTACATCTGCCAGAT 72527 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 633627556655600