Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Davidsoniella_20virescens_20[genbank_20GCA_5F001513805.1_202016-01-
13] 561 sequences; 33,427,969 total letters
Query= NC_008291.1
Length=198050
Score E
Sequences producing significant alignments: (Bits) Value
seq7 143 3e-29
>seq7
Length=77910
Score = 143 bits (158), Expect = 3e-29
Identities = 372/566 (66%), Gaps = 6/566 (1%)
Strand=Plus/Minus
Query 32652 AACATCAAACATGCGAAATCGCAGTGTAGACCCTCGTCTCTACTAATTAATTCGTTGGAA 32711
|||| ||| || || ||||| ||| | |||||| || | || | ||||| ||
Sbjct 73092 AACAACAAGCAAGCAAAATCTGTGTGCAAACCCTCATCACGGGAGATAAGCTCGTTAGAG 73033
Query 32712 AACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGATCCA 32771
|| || || || ||||| || |||||||| ||||| || || || ||||| | |||
Sbjct 73032 AAGGTCAGACCAGGCATCAGACCACGCTTACGTAGCCAGAAGATAGAAGCAAAGGCACCA 72973
Query 32772 GAAAAGAAAATTCCTTCTACTGCCGCAAAGGCAATAAGTCTCTCTCCATAACCGG---CG 32828
|| ||||| || || || || || |||||||||| || | || || | || |
Sbjct 72972 GAGAAGAAGATACCCTCGACAGCAGCAAAGGCAACGAGACGCTGGCCGAAGGTGGATTCT 72913
Query 32829 CTGTCATGTATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATTGTCTCT 32888
||||| |||||||| | |||||||| ||||| | || || || || ||
Sbjct 72912 CTGTCGCAAATCCACTTAAGGGCCCAATCAGCCTTACGGCGGATGCAGGGGATGGTGTCA 72853
Query 32889 ATAGCATTAAAGAGATAGtttttttCATTACTATCTTTAACATATGTATCAATCAAAAGA 32948
|| || || || || || | | | | || || | || ||||| ||||| ||
Sbjct 72852 ATGGCGTTGAACAGGTATGTGCGCTGAGCAGGCTCCTTGATGTAAGTATCGATCAATAGG 72793
Query 32949 CTATACATTTCCGAATGAATGTTTTCAATGGCCATTTGAAATCCGTAGAAGCATCTAGCC 33008
|| | || || || ||||| || || || || || ||||||||||| | ||||
Sbjct 72792 GAGTAGGTCTCGGAGTGGATGTTCTCCATCATGATCTGGAAACCGTAGAAGCAGCGAGCC 72733
Query 33009 TCGGTAATCTGTACTTCTGTACAAAATCGTTCTGCTAAATTTTCATTCACTATTCCGTCA 33068
|||| ||||| || || | | || || || | | ||| || || || || || |||
Sbjct 72732 TCGGGGATCTGGACCTCACCAGAGAAACGCTCAACCAGATTCTCGTTGACAATACCATCA 72673
Query 33069 CTGGCTGCAAAAAACGCCAATACATGTTTTATAAAATATTTTTCGTCTGGTGTTA---GT 33125
||| ||||| || |||| | || || || |||| ||||| |||| |
Sbjct 72672 GAGGCAGCAAAGAAAGCCAGGATGTGGGAGATGAAGTATTGCTCGTCCTTGGTTAGACGG 72613
Query 33126 TTATTCCAATCATTGATATCTTTAGATATATCCACTTCTTCCACTGTCCAAAATGATGCC 33185
|| ||||| || | || ||| || |||| ||| | || || | |||||||| ||||||
Sbjct 72612 TTGTTCCAGTCGTGGAGATCCTTGGATAGATCAATCTCCTCAGCGGTCCAAAAAGATGCC 72553
Query 33186 TCTGCCTTTTTATACATATTCCAGAT 33211
|| ||||| || ||||| | ||||||
Sbjct 72552 TCGGCCTTCTTGTACATCTGCCAGAT 72527
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 633627556655600
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |