Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Davidsoniella_20virescens_20[genbank_20GCA_5F001513805.1_202016-01-
13] 561 sequences; 33,427,969 total letters
Query= NC_009127.1
Length=295146
Score E
Sequences producing significant alignments: (Bits) Value
seq85 351 2e-91
seq7 288 2e-72
>seq85
Length=153405
Score = 351 bits (388), Expect = 2e-91
Identities = 1222/1884 (65%), Gaps = 61/1884 (3%)
Strand=Plus/Minus
Query 243741 TGAACTGGACGGGTGCGACGGCGGCCTTGGTCCTCAGGTAGTACATGCCGGTCTTGAGTC 243800
||||||| | ||| || ||||||||| ||| | ||||||||||| ||||||||||| |
Sbjct 97116 TGAACTGAATGGGAGCAGCGGCGGCCTGGGTACGTAGGTAGTACATACCGGTCTTGAGAC 97057
Query 243801 CACTGGACCAGGCGTGGAGGTGCATGGCCGTCAGCTTCTTCATCTTGAGCTTTGGGTCGT 243860
| |||| || | ||||||| || | ||| ||| || | ||||| |
Sbjct 97056 CGAGCTTCCAGCCGGCAAAGTGCATGCTGGTGATCTTACCCAT----AG--TAGGGTCCT 97003
Query 243861 CCTCGCACAGAAAGAGGTTGAGGGACTGGCTCTGGTCGACGAAGGGCGCC-CGCTCTGCG 243919
| | ||| | || || ||||| |||||||| ||| | |||| || || ||
Sbjct 97002 TCATGT---GAATG---TTCAGCGACTGCGACTGGTCGATGAAAG-CGCCACGATCGGCA 96950
Query 243920 GCCATGGTGATGA-GGTCCTTCTGAGATATCTCATACGCCGTCTTGTAGATGGGCTTGAG 243978
||||| | | ||| | |||||| ||||| | | |||||||| | || |||||
Sbjct 96949 GCCATCTGCACAACGGTACG-CTGAGAAATCTCCCAGACGGTCTTGTACAGGGCCTTGAT 96891
Query 243979 GTGCTCGGGGAACCCTTCGATGTTCTGCACCGAGCCCTTGTGGACGATGAGCTGGGTGCG 244038
|| |||||| |||||| || ||||| || || | | |||| || |
Sbjct 96890 GTCGGCGGGGATATTAGGGATGTTTTGGACCGAACCGTTATCCGCAATGATACGGTTCTT 96831
Query 244039 CATGTTATCGTTCCACAGGCCCA-AGCGCTCCAG----CGCCTCGACCAGGTGCCTGTTC 244093
|||| | ||| ||||||||| | | || |||| ||| | |||||| | ||
Sbjct 96830 CATGGTGTCGGACCACAGGCCAAGATCGA-CCAGGTCACGCAGCAACCAGGGG----TTA 96776
Query 244094 ACCACCTGAAACTCTCCCGACAGCACGCGGCGCTGGTAGAGGTTGCTGCTGAGCGGCTCG 244153
|| ||||| ||||| || | |||||| ||||||||||||| ||| | || ||||||
Sbjct 96775 ACAACCTGGAACTCACCAGCCAGCACACGGCGCTGGTAGATGTTCGAGGTGTAAGGCTCG 96716
Query 244154 ATGCTCTCCGTGTTGCCCAGTATCTGCGCCGTGCTCGCAGTCGGCATGGGCGACACCAGC 244213
| || ||| ||||||| || ||||| | || ||||| ||||| || | || ||
Sbjct 96715 AAGCACTCGTTGTTGCCTAGGATCTGAGAGGTCGAGGCAGTTGGCATAGGAGCCAGGAGT 96656
Query 244214 AGACTGTTCCTCACGCCGTGCCTCTGGATGCGGAGTCTGAGCTCGTTCCAGTCCCACATG 244273
|| ||| | |||||||||| || ||| | ||||| | ||||||||||| |
Sbjct 96655 AGCGAGTTGCGCACGCCGTGCTGCTTGATCTGTTCCTTGAGCGAGGCCCAGTCCCACAGG 96596
Query 244274 CC-CGAGAGGTCCTCGCGTTTGAGGCCCCACATGTCAAACTGCAGCAGCCCCTTGCTGAC 244332
| | || ||| |||| ||||||||| |||||||| | |||| ||
Sbjct 96595 TCACTAGGGGTAA---CGTT-------CCACATGTCGAACTGCAGGATACCCTGAGATAC 96546
Query 244333 GGGGCTGCCCTCGTAGGTCGGGTAGGGACCGTCGCGCTGGGCCAGCTTACAGCTCTC-GT 244391
|| ||||| ||||| | ||| | ||| ||| || || | || || | ||
Sbjct 96545 AGGCGAACCCTCATAGGTGGAGTAAGTACCCTCGGTTTGAGCAATCTCGCACGAGGCAGT 96486
Query 244392 CGAGGGCGGCGTAGTAGATGGTCTCGAAGATCATCTTGTTCATGTCGCGGGCCTTGCCGC 244451
| ||||| |||| ||||||||||||||||||| |||||||| |||||||| | |
Sbjct 96485 C-AGGGCAGCGTGGTAGATGGTCTCGAAGATCTGCTTGTTCAGAGTGCGGGCCTCGGCAG 96427
Query 244452 AGGTGAAGGGGATGCCCATCATCATGAAGACGTCGGCCAGTCCCTGCACGCCGATGCCGA 244511
| ||| || |||| | | ||| | ||||| || ||||| || || | || |
Sbjct 96426 ACTCGAAAGGCATGCGTAGGGCTAGGAAAGCATCGGCTAGACCCTGGACACCAACACCAA 96367
Query 244512 TGGGTCTGTGTCGCTTGTTGGAGCGCATGGCTTCGGGCACGGGGTAAAAGTTGCCGTCGA 244571
|||| | || ||| ||||| | || || ||||| ||||| |||| | ||||
Sbjct 96366 TGGGGCGATGACGCATGTTGCTGTTGTGAGCCTCAGGCACAGGGTAGTGGTTGACATCGA 96307
Query 244572 TCACCTTGTTGAGGTTGCGGGTGATCATGCGGACGACGTCGGCCAGCAGCTGAAAGTCGT 244631
| | || ||||| || || || | || ||| |||| ||| || ||||
Sbjct 96306 TAATGCGATTCAGGTTACGCACGACCACCTTGGTGATCTCGTGCAGCTTCTGGAAATCGT 96247
Query 244632 ACTCGTAGGGATCCTCGGCGATGGTGATCCTCACAAACTCGTTGAGGGCGACGCTGGCCA 244691
|||| |||| | | || || || | | || ||||| | ||| |
Sbjct 96246 ACTC-------TCCTTTG---TTGTAGTCGACAAAGGATGGT--AGGGCTAGCGAGGCTA 96199
Query 244692 GGTTGCAGACGGCCACCTCCTCCGAGTTGGTGTACTGGACAATCTCGGTGCAGAGGTTAC 244751
||||||| ||||| ||||| || | | ||||| || || || ||||| || ||
Sbjct 96198 GGTTGCATACGGCAACCTCATCGGGAGCGCAGTACTCGATGATTTCAGTGCATAGATTGG 96139
Query 244752 TGCACTTGATGGTGCCCAGGTGCTGGTGATTGGACTTGGCGTTGCAGGCGTCCTTGTAGA 244811
|| ||| ||||| |||| | || ||| ||| |||||||||||||||||| |
Sbjct 96138 AGCTGCGGATAGTGCCTAGGTTTTTCTGGTTGCTCTTCTTGTTGCAGGCGTCCTTGTACA 96079
Query 244812 GCATGAAGGGCCCCCCGGTCTCGAGCTGGGCGACGAGGACGCTGTTCCAGAGGTCCCTAG 244871
||||||| || ||||||||| |||||| |||| | | || ||| || | | |
Sbjct 96078 GCATGAATGGGTTGCCGGTCTCGGTCTGGGCCTCGAGAATGGCGTACCACAGCTTCTGGG 96019
Query 244872 CCTTGACCGTCCTGCGAGCCTTGCCCTCTGCCTCGTAGCGGGTGTACAGGGCCTCGAACT 244931
|||||| || || | ||| || |||||| ||||| ||||||||||
Sbjct 96018 CCTTGATGGTAAGACGGCCACGGCCTTCACTCTCGTACTTCTCATACAGAGCCTCGAACT 95959
Query 244932 CGGGGCCCCAGACCTCGTCTAGGCCGGGGCACGACGCCGGGCACATGAGACTCCACTCGC 244991
| ||| || || |||| || |||||| ||||||||||| |||| | |
Sbjct 95958 CCTCGCCGTAGCAATCAGCTAGTCCAGGGCACTCATTAGGGCACATGAGTGTCCAGTTGG 95899
Query 244992 CGCCGTCCTTGACCCTCTGCATGAAGAGGTCGGGGATCCAGAGGGCCTGGAAGAGGTCCC 245051
|| | | ||| | || |||||| || ||||| ||||| || || |||| || || |
Sbjct 95898 CGTTCTTTTCGACACGCTTCATGAACAGATCGGGAATCCACAGTGCTAGGAACAGATCAC 95839
Query 245052 TGGTCCTCTGCTCGTCCGAGCCAGTGTTCTTCCTCAGCTCCAAAAAGTCAAAGACGTCGA 245111
|| | ||| ||| ||| |||||| | ||| || | || || || || |||
Sbjct 95838 GGGCACGAATCTCCTCCTTGCCGTGGTTCTTGCGCAGATCAAGGAACTCGAACACATCGG 95779
Query 245112 CGTGCCAGGGCTCCATGTAGACAGCGAGGGCGCCGGGCCGCTTGTTGCCTCCCTGGTCCA 245171
||||||| ||||||| ||| | || | ||| ||||| |||||||| || |||||||| |
Sbjct 95778 CGTGCCACGGCTCCAGGTAAATGGCAAAGGCACCGGGGCGCTTGTTACCACCCTGGTCGA 95719
Query 245172 CCATCCTCTCGAGCG-CGTTGAAGATGCGCAGGGTAGGCACTATGCCGTTAGAGTGGCCG 245230
| | | || | |||||||| ||||| | || || ||||||||||| ||||
Sbjct 95718 CGTAGCGGGC-AGTGTTGTTGAAGACACGCAGCATGGGAACAATGCCGTTAGACGTGCCG 95660
Query 245231 TTGGTGCCCTTGATGTAGGCGCCCTTGCCCCTGAGGTTGCTGATGGACATGCCTAGTCCG 245290
|||||||| ||||| | ||| || | | || | || | || || | |||
Sbjct 95659 TTGGTGCCAGCAATGTACGAGCCAGTGGCACGGATACGGTGGACGTTCAGACCGATACCG 95600
Query 245291 CCGGCGTGCTTGGAGATGAGGGCGCAGCTCTTGATGGTGTCTGCTATGCCCTCCATGCTG 245350
||||| ||||||||| | || || |||| | || || || || || ||||||
Sbjct 95599 CCGGCCATCTTGGAGATCATAGCACAAGTCTTCAGCGTATCGTAGATACCATCAATGCTG 95540
Query 245351 TCCGACTTCATGTTGAGCAGAAAGCAGGAGGACAGCTGGGGCTTGGGGCTGCACGAGTTG 245410
|| |||||| | | || ||||| || || ||||||| || || ||| | ||||
Sbjct 95539 TCGTCCTTCATATCAACTAGGAAGCACGACGATAGCTGGGCCTGCGGTGTGCCAGCGTTG 95480
Query 245411 AACAGAGTGGGGCTGGCGTGGGTAAAGTAGCGGCTCGAGAGGAACCCGTACGTCTGGAGC 245470
|| || ||||| |||||| || ||| | ||| || | | | ||| |||| ||||
Sbjct 95479 AATAGCGTGGGCGAGGCGTGTGTGAAGAACTTGCTTGACATGTAGTTGTAAGTCTCGAGC 95420
Query 245471 AGAGCGTCGATGTTGTCGCCGTGGATCTGCAGGGCGCAC-CTCATGAGGGTGTGCTGGGG 245529
| | ||| | | ||| || ||| | ||| ||| | ||||| ||||||| ||
Sbjct 95419 ACACGGTCAACGCGGTCACCCCAGATGCCAACGGC-CACACGCATGATCATGTGCTGCGG 95361
Query 245530 CGTCTCG---ATGGGTCCCTCGGGTCCCTTGAGCATGTAGGAGCGCTCGAGCGTCTTGAA 245586
|||| || || || | ||| |||| ||| || ||||| || ||||||||
Sbjct 95360 ACGCTCGACAATCTTGCCGTC---TAGCTTAAGCAGGTACGAACGCTCTAGGGTCTTGAA 95304
Query 245587 CCCAAAGTACGAGTAGCCAAAGTC 245610
||||||||| |||| |||||
Sbjct 95303 GCCAAAGTACTGGTAGTTGAAGTC 95280
>seq7
Length=77910
Score = 288 bits (318), Expect = 2e-72
Identities = 589/861 (68%), Gaps = 32/861 (4%)
Strand=Plus/Plus
Query 42300 ATCTGGTCCATGTACAAGAAGGCGCAGTTCTCCAACTGGACCGCCGAGGAGATTGACCTG 42359
|||||| |||||||||||||| || || |||||||| ||||||||||| ||
Sbjct 72527 ATCTGGCAGATGTACAAGAAGGCCGAGGCATCTTTTTGGACCGCTGAGGAGATTGATCTA 72586
Query 42360 GCCAAGGACACGGCCGGCTGGGAGTCACTGTCTGA----GAACGAAAAGTTTTTCCTCAA 42415
||||||| || |||| | || |||| | | |||| | | ||| ||
Sbjct 72587 TCCAAGGATCTCCACGACTGGAACA-ACCGTCTAACCAAGGACGAGCAATACTTCATCTC 72645
Query 42416 AAACATACTGGCCTTCTTCGCCGCCTCTGACGGCATAGTCAATGAGAACCTGGCCACCAG 42475
|||| ||||| ||||| || |||||||| || || ||||| ||||| |||| |
Sbjct 72646 CCACATCCTGGCTTTCTTTGCTGCCTCTGATGGTATTGTCAACGAGAATCTGGTTGAGCG 72705
Query 42476 GTTCATGAAAGAGGTGCAGTACTTTGAGGCGCGCTGCTTCTACGGCTTCCAGATAGCCAT 42535
||| ||||| ||| | ||||| |||||||||||||| |||||||| ||
Sbjct 72706 TTTCTCTGGTGAGGTCCAGATCCCCGAGGCTCGCTGCTTCTACGGTTTCCAGATCATGAT 72765
Query 42536 AGAGAACGTGCACTCTGAGGTGTACGCCAAACTGCTCAACACGTACATCCTGGATCCCGT 42595
|||||| | ||||| ||| ||| || | || || | || |||||| ||| || |
Sbjct 72766 GGAGAACATCCACTCCGAGACCTACTCCCTATTGATCGATACTTACATCAAGGAGCCTGC 72825
Query 42596 CGAGCGTAACGGGCTGTTCAAGGCCATGGAGACGATGCCCTGCATCAAGAAGAAGGCGGA 42655
|||| | |||||||| ||||| || || || ||||||||| ||||| ||
Sbjct 72826 TCAGCGCACATACCTGTTCAACGCCATTGACACCATCCCCTGCATCCGCCGTAAGGCTGA 72885
Query 42656 CTGGGCGCTCAACTGGAT---CGAGAGTCCCGACGCAACGTTCGGCGAGAGGCTGGTAGC 42712
||||| || || ||||| ||| || || | || |||||| || | || || ||
Sbjct 72886 TTGGGCCCTTAAGTGGATTTGCGACAG---AGAATCCACCTTCGGCCAGCGTCTCGTTGC 72942
Query 42713 CTTTACCGCCGTCGAGGGCATCTTCTTCTCGGGCGCCTTCGCCTCCATCTTCTGGCTCAA 42772
|||| | || |||||||| ||||||||||| || ||||| || || ||||||||||| |
Sbjct 72943 CTTTGCTGCTGTCGAGGGTATCTTCTTCTCTGGTGCCTTTGCTTCTATCTTCTGGCT-AC 73001
Query 42773 GCAGAAGGTGTC-GATGCCCGGACTCACCTTCTCGAACGAACTCATCAGCAGGGACGAGG 42831
| | | ||| |||||| || || |||||||| ||||| || ||| | | || ||||
Sbjct 73002 GTAAGCGTGGTCTGATGCCTGGTCTGACCTTCTCTAACGAGCTTATCTCCCGTGATGAGG 73061
Query 42832 GGCTGCATAGGGACTTTGCCTGCCTCCTGTTCTCGAGCCACCTCAGGCACAA--GCCCTC 42889
| |||| | || ||||| ||| | |||||||| ||| | | |||| | |||
Sbjct 73062 GTTTGCACACAGATTTTGCTTGCTTGTTGTTCTCG---CACTT---GAACAACCGTCCTA 73115
Query 42890 G-AAGGAGCGGGTCCGGGCCATCATCACGGAGGCCGTGGAGATCGAGAAGGAGTTCCTCA 42948
| ||||| | |||| || ||||| || || || | ||||||||||||||| | |
Sbjct 73116 GCAAGGAACTGGTCGAAAAGATTATCACTGATGCTGTTGTCATCGAGAAGGAGTTCTTAA 73175
Query 42949 CGCAGTCGCTGCC---CGTGTCCCTGGTCGGCATGAACCACGACCTCATGTGCAAGTACA 43005
| || | || || || || ||| | ||||||||| ||| || ||| ||||||
Sbjct 73176 CTGAGGCTCTTCCTTGCG-GT--CTGCTAGGCATGAACGCCGATCTGATGAAGCAGTACA 73232
Query 43006 TCCAGTACGTCGCCGACCATCTCCTG--TGCCAGATGGGTCTCAGCCGCCTCTACAACAC 43063
| ||| ||| || |||| ||||||| |||| | || | | | ||| |
Sbjct 73233 TTGAGTTCGTTGCTGACCGTCTCCTGGTTGCC--CTTGGCAACGACAAAGTGTACCGTGC 73290
Query 43064 GCCGTGCCCCTTCGACTTTATGGAGAACATCTCGTTGGAGGGCAAGACCAACTTTTTCGA 43123
| |||||||||||| ||||||||||| || ||| |||||||||||||| || ||
Sbjct 73291 TACAAACCCCTTCGACTTCATGGAGAACATTTCTCTGGGAGGCAAGACCAACTTCTTTGA 73350
Query 43124 GAAGCGCGTCGCCGACTACCA 43144
|||||| || | ||||||||
Sbjct 73351 GAAGCGTGTTGGTGACTACCA 73371
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 944332577821360
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