Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Davidsoniella_20virescens_20[genbank_20GCA_5F001513805.1_202016-01- 13] 561 sequences; 33,427,969 total letters Query= NC_010276.1 Length=156179 Score E Sequences producing significant alignments: (Bits) Value seq542 95.1 1e-14 >seq542 Length=123657 Score = 95.1 bits (104), Expect = 1e-14 Identities = 148/212 (70%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 64232 AGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCT 64291 || || ||||| | ||||| || |||||||||||||| || | | |||||| |||| Sbjct 107358 AGAACCAGATGTAGGGTCGACTCCTTTTGAATGTTGTAGTCGGATAGGGTGCGACCGTCC 107299 Query 64292 TCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCT 64351 || |||||||| || || | ||||| ||||| ||||| || ||||| || || || || Sbjct 107298 TCCAGCTGCTTACCAGCGAAGATGAGACGCTGTTGGTCCGGGGGAATACCCTCCTTGTCC 107239 Query 64352 TGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTC 64411 || || || ||| || || | || || | || || || | ||| | |||| Sbjct 107238 TGGATCTTGGACTTCACGTTGTCAATGGTGTCGGAAGACTCGACCTCAAGAGTGATGGTC 107179 Query 64412 TTGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443 ||||| || | ||| || || || || ||||| Sbjct 107178 TTGCCAGTGAGAGTCTTGACAAAGATCTGCAT 107147 Score = 91.5 bits (100), Expect = 1e-13 Identities = 157/228 (69%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 64216 ACCGCCGCGCAATCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGC 64275 ||| || |||| | || || ||||| | || || || || || |||||||| || | Sbjct 107146 ACCACCACGCAGACGCAGAACCAGATGCAGAGTAGACTCCTTCTGGATGTTGTAGTCAGA 107087 Query 64276 GACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGG 64335 | || || |||| || |||||||| || || ||||||| ||||||||||| ||||| Sbjct 107086 CAGAGTACGTCCGTCCTCCAGCTGCTTACCAGCGAAAATGAGACGCTGCTGGTCCGGAGG 107027 Query 64336 AATTCCTTCTTTTTCTTGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCAC 64395 ||| || || || || || || || ||| || || | ||||| | || || Sbjct 107026 AATACCCTCCTTGTCCTGAATCTTGGACTTCACGTTGTCAATGGTATCTGAAGATTCAAC 106967 Query 64396 TTCTACAGTTACGGTCTTGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443 || | ||| | ||||||||| || | ||| || || || || ||||| Sbjct 106966 CTCGAGAGTGATGGTCTTGCCAGTGAGAGTCTTGACAAAGATCTGCAT 106919 Score = 87.8 bits (96), Expect = 2e-12 Identities = 123/173 (71%), Gaps = 0/173 (0%) Strand=Plus/Minus Query 64247 GTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTCAAGCTGCTTGCCG 64306 || || || ||||| ||||||||||| | || |||||| |||| || || ||||||||| Sbjct 106597 GTGGACTCCTTTTGGATGTTGTAATCAGAGAGGGTGCGGCCGTCCTCGAGTTGCTTGCCG 106538 Query 64307 GCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGTATTTTTTGCTTT 64366 || |||| || || |||||||| ||||| || || || || || || || || ||| Sbjct 106537 GCGAAAATCAGACGTTGCTGGTCCGGAGGGATGCCCTCCTTGTCCTGAATCTTGGACTTG 106478 Query 64367 ACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTCTTGCCGGT 64419 ||| || | ||||| | || || || | || | ||||||||||| Sbjct 106477 ACATTGTCGATGGTATCGGATGACTCAACCTCGAGGGTGATAGTCTTGCCGGT 106425 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 499641296240840