Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Davidsoniella_20virescens_20[genbank_20GCA_5F001513805.1_202016-01-
13] 561 sequences; 33,427,969 total letters
Query= NC_013288.1
Length=191761
Score E
Sequences producing significant alignments: (Bits) Value
seq7 167 3e-36
>seq7
Length=77910
Score = 167 bits (184), Expect = 3e-36
Identities = 356/524 (68%), Gaps = 11/524 (2%)
Strand=Plus/Minus
Query 127519 AGCAAACTCTTGGTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGACC 127578
|||||| ||| ||| | |||||| ||||||||||| || || || |||||| ||||||
Sbjct 73081 AGCAAAATCTGTGTGCAAACCCTCATCACGGGAGATAAGCTCGTTAGAGAAGGTCAGACC 73022
Query 127579 TGGCATGAGACCCCGCTTCTTCAACCAGAAAATCGCACAAAATGAGCCAGAGAAGAAGAT 127638
||||| ||||| ||||| | |||||| || | | ||| | ||||||||||||||
Sbjct 73021 AGGCATCAGACCACGCTTACGTAGCCAGAAGATAGAAGCAAAGGCACCAGAGAAGAAGAT 72962
Query 127639 CCCCTCCACACACGCGAACGCAAATAGACGCTCGGCAAAGGAGCGGGACTTTGTATCAAA 127698
||||| ||| || || |||| ||||||| | | |||| | | || ||| ||||
Sbjct 72961 ACCCTCGACAGCAGCAAAGGCAACGAGACGCTGGCCGAAGGTG-GATTCTCTGTCGCAAA 72903
Query 127699 -CCACTTCATCGCCCACTGTGCCTTTTTCTCGATACATGGGACGGTCTGGATCGCTTCAA 127757
|||||| | ||||| | ||||| ||| || |||| ||| | || || | |
Sbjct 72902 TCCACTTAAGGGCCCAATCAGCCTTACGGCGGATGCAGGGGATGGTGTCAATGGCGTTGA 72843
Query 127758 AGAGTTCCTTCTTTTCTGA--TGGATCTTTGATGTACTTATCTATGAGTTTTGAATATGT 127815
| || | | | |||| || || |||||||| |||| || | | || || ||
Sbjct 72842 ACAGGT--ATGTGCGCTGAGCAGGCTCCTTGATGTAAGTATCGATCAATAGGGAGTAGGT 72785
Query 127816 TTCGCCGTGGACCAT-TTCATTATGGCACTGATACGCGTAGAAAGAGCGCGCTTCGCTTA 127874
||| ||||| | | ||| || | ||| | ||||||| |||| || ||| |
Sbjct 72784 CTCGGAGTGGATGTTCTCCATCAT-GATCTGGAAACCGTAGAAGCAGCGAGCCTCGGGGA 72726
Query 127875 TCTGTACCTCATCGGCAAAATTGTTATTGATATTCTCAAAAACAATTCCATCGGACCCAG 127934
|||| |||||| | | ||| | | | |||||| ||||| ||||| || |||
Sbjct 72725 TCTGGACCTCACCAGAGAAACGCTCAACCAGATTCTCGTTGACAATACCATCAGAGGCAG 72666
Query 127935 CAAAAAACGCCAGGATATACTTTATGAATTTCTGTTCATTCTCGTTCA---GGGTCTTCC 127991
|||| || |||||||| | ||||| | || || | || | | | || | ||||
Sbjct 72665 CAAAGAAAGCCAGGATGTGGGAGATGAAGTATTGCTCGTCCTTGGTTAGACGGTTGTTCC 72606
Query 127992 AGTCGTCGAGATCCTTTGAGAGATCTACCTCCTCCGCAGTCCAA 128035
|||||| ||||||||| || ||||| | |||||| || ||||||
Sbjct 72605 AGTCGTGGAGATCCTTGGATAGATCAATCTCCTCAGCGGTCCAA 72562
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 613502897780760
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |