Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Davidsoniella_20virescens_20[genbank_20GCA_5F001513805.1_202016-01-
13] 561 sequences; 33,427,969 total letters
Query= NC_013668.3
Length=248526
Score E
Sequences producing significant alignments: (Bits) Value
seq85 183 5e-41
>seq85
Length=153405
Score = 183 bits (202), Expect = 5e-41
Identities = 459/684 (67%), Gaps = 15/684 (2%)
Strand=Plus/Minus
Query 203838 TCTTG-TCCACCGTGAACTGAATGGCGTTCA-CGGCAGGCCTGCTT-CTCAGATAGTACA 203894
||||| || || ||||||||||||| | || |||| |||||| | | || |||||||
Sbjct 97129 TCTTGGTCGACAGTGAACTGAATGG-GAGCAGCGGC-GGCCTGGGTACGTAGGTAGTACA 97072
Query 203895 TGCCGGTCTTTAGGCCCTTCTGCCACCCGTACATGTGCATGGAAGACAGTTTGCTCACGT 203954
| |||||||| || || || ||| ||| | ||||||| | | || | ||
Sbjct 97071 TACCGGTCTTGAGACCGAGCTTCCAGCCGGCAAAGTGCATGCTGGTGATCTTACCCATAG 97012
Query 203955 TGGGGTCGGCCATGTGAATGTTCAGAGACTGGCTTTGGTCGATGAAAGGCGCC-CGATCT 204013
| ||||| ||||||||||||||| ||||| ||||||||||||| |||| |||||
Sbjct 97011 TAGGGTCCTTCATGTGAATGTTCAGCGACTGCGACTGGTCGATGAAAG-CGCCACGATCG 96953
Query 204014 GCGGCCATATTGATAATGGTCTTCTGCGAAATCTCCCACACCGTCTTGAACACGTCTCTG 204073
|| ||||| | | || ||| ||| ||||||||||| || |||||| ||| | | ||
Sbjct 96952 GCAGCCATCTGCACAACGGTACGCTGAGAAATCTCCCAGACGGTCTTGTACAGGGCCTTG 96893
Query 204074 GTGTGTTGAGGCACATCTTCCCACGTCCTG-ATCGAGCCGTTGTCGGCCATCAGTCTCAT 204132
||| || | || | | || || | ||| ||||| || || || | | |
Sbjct 96892 ATGTCGGCGGGGATAT-TAGGGATGTTTTGGACCGAACCGTTATCCGCAATGATACGGTT 96834
Query 204133 CCTCGTCTCCTCCCCCCACATGCCCAACCTGATCAGCTCCCGCACCAGGTGGGGGTTGAT 204192
| || | || ||||| ||| | || ||| || |||| || |||||| |
Sbjct 96833 CTTCATGGTGTCGGACCACAGGCCAAGATCGACCAGGTCACGCAGCAACCAGGGGTTAAC 96774
Query 204193 GATCTGAAAGTCTCCGGACAGCACCCCTCGGGTGAACAGGTTGTTGGTGAATGGTTCGAA 204252
| ||| || || || | |||||| | || | | | ||| |||| | || |||||
Sbjct 96773 AACCTGGAACTCACCAGCCAGCACACGGCGCTGGTAGATGTTCGAGGTGTAAGGCTCGAA 96714
Query 204253 CGCCTCGTTGTTGCCGAAAATCTGAGCGGTGCTGGCCGTGGGCATGGGAGCCAGGAGCAG 204312
|||||||||||| | ||||||| ||| ||| || ||||| ||||||||||| ||
Sbjct 96713 GCACTCGTTGTTGCCTAGGATCTGAGAGGTCGAGGCAGTTGGCATAGGAGCCAGGAGTAG 96654
Query 204313 GGAGTTGCGCACACCGTATTTTTGGACCCTGCGCTTCAGAGAGGTCCAGTCGTGCATCGC 204372
||||||||||| |||| | | || | ||| || |||| |||||| || |
Sbjct 96653 CGAGTTGCGCACGCCGTGCTGCTTGATCTGTTCCTTGAGCGAGGCCCAGTCCCACAGGTC 96594
Query 204373 ACTGGGTTTCACGCCCCACATGTCGAACTGAAAGATGCCTTGACTGACTGGGCTGCCCTT 204432
||| || | ||| ||||||||||||||| | ||| || ||| || || ||||
Sbjct 96593 ACTAGGGGTAACGTTCCACATGTCGAACTGCAGGATACCCTGAGATACAGGCGAACCCTC 96534
Query 204433 GTACGTCGGATAAGGCTGATCCTC---TTCTGCCAGCTTGCACGAGGCGGCCATGGCGTG 204489
|| || | |||| | |||| || || | || ||||||||| | || |||
Sbjct 96533 ATAGGTGGAGTAAG---TACCCTCGGTTTGAGCAATCTCGCACGAGGCAGTCAGGGCAGC 96477
Query 204490 ATAGTACATGGTCTCAAAGATCTG 204513
| ||| |||||||| ||||||||
Sbjct 96476 GTGGTAGATGGTCTCGAAGATCTG 96453
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 795149623974160
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |