Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Davidsoniella_20virescens_20[genbank_20GCA_5F001513805.1_202016-01- 13] 561 sequences; 33,427,969 total letters Query= NC_013668.3 Length=248526 Score E Sequences producing significant alignments: (Bits) Value seq85 183 5e-41 >seq85 Length=153405 Score = 183 bits (202), Expect = 5e-41 Identities = 459/684 (67%), Gaps = 15/684 (2%) Strand=Plus/Minus Query 203838 TCTTG-TCCACCGTGAACTGAATGGCGTTCA-CGGCAGGCCTGCTT-CTCAGATAGTACA 203894 ||||| || || ||||||||||||| | || |||| |||||| | | || ||||||| Sbjct 97129 TCTTGGTCGACAGTGAACTGAATGG-GAGCAGCGGC-GGCCTGGGTACGTAGGTAGTACA 97072 Query 203895 TGCCGGTCTTTAGGCCCTTCTGCCACCCGTACATGTGCATGGAAGACAGTTTGCTCACGT 203954 | |||||||| || || || ||| ||| | ||||||| | | || | || Sbjct 97071 TACCGGTCTTGAGACCGAGCTTCCAGCCGGCAAAGTGCATGCTGGTGATCTTACCCATAG 97012 Query 203955 TGGGGTCGGCCATGTGAATGTTCAGAGACTGGCTTTGGTCGATGAAAGGCGCC-CGATCT 204013 | ||||| ||||||||||||||| ||||| ||||||||||||| |||| ||||| Sbjct 97011 TAGGGTCCTTCATGTGAATGTTCAGCGACTGCGACTGGTCGATGAAAG-CGCCACGATCG 96953 Query 204014 GCGGCCATATTGATAATGGTCTTCTGCGAAATCTCCCACACCGTCTTGAACACGTCTCTG 204073 || ||||| | | || ||| ||| ||||||||||| || |||||| ||| | | || Sbjct 96952 GCAGCCATCTGCACAACGGTACGCTGAGAAATCTCCCAGACGGTCTTGTACAGGGCCTTG 96893 Query 204074 GTGTGTTGAGGCACATCTTCCCACGTCCTG-ATCGAGCCGTTGTCGGCCATCAGTCTCAT 204132 ||| || | || | | || || | ||| ||||| || || || | | | Sbjct 96892 ATGTCGGCGGGGATAT-TAGGGATGTTTTGGACCGAACCGTTATCCGCAATGATACGGTT 96834 Query 204133 CCTCGTCTCCTCCCCCCACATGCCCAACCTGATCAGCTCCCGCACCAGGTGGGGGTTGAT 204192 | || | || ||||| ||| | || ||| || |||| || |||||| | Sbjct 96833 CTTCATGGTGTCGGACCACAGGCCAAGATCGACCAGGTCACGCAGCAACCAGGGGTTAAC 96774 Query 204193 GATCTGAAAGTCTCCGGACAGCACCCCTCGGGTGAACAGGTTGTTGGTGAATGGTTCGAA 204252 | ||| || || || | |||||| | || | | | ||| |||| | || ||||| Sbjct 96773 AACCTGGAACTCACCAGCCAGCACACGGCGCTGGTAGATGTTCGAGGTGTAAGGCTCGAA 96714 Query 204253 CGCCTCGTTGTTGCCGAAAATCTGAGCGGTGCTGGCCGTGGGCATGGGAGCCAGGAGCAG 204312 |||||||||||| | ||||||| ||| ||| || ||||| ||||||||||| || Sbjct 96713 GCACTCGTTGTTGCCTAGGATCTGAGAGGTCGAGGCAGTTGGCATAGGAGCCAGGAGTAG 96654 Query 204313 GGAGTTGCGCACACCGTATTTTTGGACCCTGCGCTTCAGAGAGGTCCAGTCGTGCATCGC 204372 ||||||||||| |||| | | || | ||| || |||| |||||| || | Sbjct 96653 CGAGTTGCGCACGCCGTGCTGCTTGATCTGTTCCTTGAGCGAGGCCCAGTCCCACAGGTC 96594 Query 204373 ACTGGGTTTCACGCCCCACATGTCGAACTGAAAGATGCCTTGACTGACTGGGCTGCCCTT 204432 ||| || | ||| ||||||||||||||| | ||| || ||| || || |||| Sbjct 96593 ACTAGGGGTAACGTTCCACATGTCGAACTGCAGGATACCCTGAGATACAGGCGAACCCTC 96534 Query 204433 GTACGTCGGATAAGGCTGATCCTC---TTCTGCCAGCTTGCACGAGGCGGCCATGGCGTG 204489 || || | |||| | |||| || || | || ||||||||| | || ||| Sbjct 96533 ATAGGTGGAGTAAG---TACCCTCGGTTTGAGCAATCTCGCACGAGGCAGTCAGGGCAGC 96477 Query 204490 ATAGTACATGGTCTCAAAGATCTG 204513 | ||| |||||||| |||||||| Sbjct 96476 GTGGTAGATGGTCTCGAAGATCTG 96453 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 795149623974160