Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Davidsoniella_20virescens_20[genbank_20GCA_5F001513805.1_202016-01-
13] 561 sequences; 33,427,969 total letters
Query= NC_014766.1
Length=194022
Score E
Sequences producing significant alignments: (Bits) Value
seq85 150 2e-31
seq119 125 9e-24
seq7 123 3e-23
seq67 89.7 6e-13
>seq85
Length=153405
Score = 150 bits (166), Expect = 2e-31
Identities = 890/1404 (63%), Gaps = 53/1404 (4%)
Strand=Plus/Plus
Query 111612 CCACAGTACATGTTCATGCGGGTCGCGATCGGTATCCATGGGGAAGATATTGATTCTGTT 111671
|| ||| ||||| ||||||| || || | || ||| || || |||| |||
Sbjct 95361 CCGCAGCACATGATCATGCGTGTGGCCGTTGGCATCTGGGGTGACCGCGTTGACCGTGTG 95420
Query 111672 TTGGAGACATACGACAAGATGTCCCGTGGTATGTTCATCCACGCAACACCAACCCTCTTC 111731
| ||||| ||| || | ||||| | | |||| ||||| | || || || |||
Sbjct 95421 CTCGAGACTTACAACTACATGTCAAGCAAGTTCTTCACACACGCCTCGCCCACGCTATTC 95480
Query 111732 AACGCTGGTACACCAAGACCCCAAATGTCCAGTTGTTTCCTTATTGCAAACAAGGAGGAT 111791
|||||||| ||||| |||| | || || ||||| ||| | ||||| ||
Sbjct 95481 AACGCTGGCACACCGCAGGCCCAGCTATCGTCGTGCTTCCTAGTTGATATGAAGGACGAC 95540
Query 111792 TCAATCAATGGCATTTACGGCACTCTCACTGAATGTGCCCAAATCTCAAAGTGGGCTGGT 111851
|| |||| || |||| || || | ||||| ||||| ||| ||| ||
Sbjct 95541 AGCATTGATGGTATCTACGATACGCTGAAGACTTGTGCTATGATCTCCAAGATGGCCGGC 95600
Query 111852 GGTATCGGGATGCACATCCATGATGTCAGAGCCAACAAGTCTCGTA--TTAGAGGTACAA 111909
|||||||| || || |||| | || | |||| | |||||| || || || |
Sbjct 95601 GGTATCGGTCTGAACGTCCACCGTATCCGTGCCACT--GGCTCGTACATTGCTGGCACCA 95658
Query 111910 ATGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCGCTATG 111969
| || || | || ||| |||| ||||| || || || ||| ||| || ||||| |
Sbjct 95659 ACGGCACGTCTAACGGCATTGTTCCCATGCTGCGTGTCTTCAACAACACTGCCCGCTACG 95718
Query 111970 TAAACCAAGCTGGGCGTCGCAAG------GGATCTATCGCAGTCTATCTTGAGCCATGGC 112023
| |||| | ||| | |||| || | | || | || || ||||| ||||
Sbjct 95719 TCGACCAGGGTGG---TAACAAGCGCCCCGGTGCCTTTGCCATTTACCTGGAGCCGTGGC 95775
Query 112024 ACGCGGATATCATGGAGTTCCTTGAGTTGCGTCTCAACCAAGGTGATGAGGAGGCGCGGT 112083
|||| ||| | | ||||||||||| |||| ||||| || | |||||| ||
Sbjct 95776 ACGCCGATGTGTTCGAGTTCCTTGATCTGCGCAAGAACCACGGCAAGGAGGAGATTCGTG 95835
Query 112084 GCCGCGATCTCTTCTCCGCTCTCTGGATTCCAGATCTCTTCATGAAGAGAGTTGAGGAGA 112143
||| ||||| ||| || || |||||||| ||||| ||||||||| | || || |||
Sbjct 95836 CCCGTGATCTGTTCCTAGCACTGTGGATTCCCGATCTGTTCATGAAGCGTGTCGAAAAGA 95895
Query 112144 GTGGCAATTGGTCTCTCTTTTGTCCAGACAAGGCACCCGGTCTCTCCGATGCCGTGGGTG 112203
| ||| ||| | ||| | || || | || || || || | ||| | || |
Sbjct 95896 ACGCCAACTGGACACTCATGTGCCCTAATGAGTGCCCTGGACTAGCTGATTGCTACGGCG 95955
Query 112204 AGGAGTTTGAAGCCCTCTACACAAAGTACGAGGAAGAAAGTC--GGGCGACTGCGACGGT 112261
||||||| || || || || ||||||||| ||| | | || || || || |
Sbjct 95956 AGGAGTTCGAGGCTCTGTATGAGAAGTACGAGAGTGAAGGCCGTGGCCGTCT--TACCAT 96013
Query 112262 GCCAGCTGCCGATG-TGTGGAAAGCTATTCTCAAGTCTCAAACCGAGACTGGTACACCAT 112320
| || | || | ||||| | || |||||| || | || |||||||| || | ||||
Sbjct 96014 -CAAGGCCCAGAAGCTGTGGTACGCCATTCTCGAGGCCCAGACCGAGACCGGCAACCCAT 96072
Query 112321 ATATGCTTTACAAAGACGCCTGTAACCAAAAGAGTAATCAAAAGAATTTGGGTGTGATCA 112380
||||| ||||| |||||||| ||| | ||||| || || || || | || |||
Sbjct 96073 TCATGCTGTACAAGGACGCCTGCAACAAGAAGAGCAACCAGAAAAACCTAGGCACTATCC 96132
Query 112381 AGAGTTCCAACCTCTGTACAGAAATCTTGGAATTTACAGACAAAGATGAGACGGCTGTGT 112440
|| ||||| || || || |||||| | || | | |||||| || || |
Sbjct 96133 GCAGCTCCAATCTATGCACTGAAATCATCGAGTACTGCGCTCCCGATGAGGTTGCCGTAT 96192
Query 112441 GTAACCTCGCATCAATCGCTCTCCCCAAGTATGTGGATCCAGAGACAAA-GACA-TTTGA 112498
| ||||| || || | || || || | ||| || | | | ||||| || | | ||
Sbjct 96193 GCAACCTAGCCTCGCTAGCCCTACCATCCTTTGTCGA-CTACA-ACAAAGGAGAGTACGA 96250
Query 112499 TTATGAAAAACTCCACGAAGTTACGAAAACTGTCACAAAAAACCTAAACAGAGTTATTGA 112558
|| | || || ||||| | || || ||| ||||| || | |||| ||
Sbjct 96251 TTTCCAGAAGCTGCACGAGATCACCAAGGTGGTCGTGCGTAACCTGAATCGCATTATCGA 96310
Query 112559 TAGAAATTTTTACCCCGT---TGAGACTGCTCGTAAATCTAATATGAGACACCGTCCAAT 112615
| || ||||| || |||| |||| || || ||| | || || || ||
Sbjct 96311 TGTCAACCACTACCCTGTGCCTGAG---GCTCACAACAGCAACATGCGTCATCGCCCCAT 96367
Query 112616 TGGTCTCGGTGTCCAAGGTCTCGCGGATGTATTCATTCTTTGTCGCCACGCA-----TTT 112670
|||| | |||||||| ||||| || |||| | ||| | | | | ||||| ||
Sbjct 96368 TGGTGTTGGTGTCCAGGGTCTAGCCGATG----CTTTCCTAG-CCCTACGCATGCCTTTC 96422
Query 112671 GATTCCGACGAAGCGAAGGAAATC--AATGCGCGTATATTTGAGACAATGTATCACGCCG 112728
|| || | ||| || | | || || || || || ||||| || || ||||| |
Sbjct 96423 GAGTCTGCCGAGGC--CCGCACTCTGAACAAGCAGATCTTCGAGACCATCTACCACGCTG 96480
Query 112729 CTCTTGA--GGCGAGTTCGGAGTTGGCAGAGGTTGATGGTCCATATGAAACCTTTGAGGG 112786
| | ||| | | || | ||| | || | || ||| | || |||| ||||||
Sbjct 96481 C-CCTGACTGCCTCGTGC-GAGATTGCTCAAACCGAGGGTACTTACTCCACCTATGAGGG 96538
Query 112787 TTCTCCAGCTTCACAAGGGGTGCTTCAATTTGATATGTGGGAAGGTGAGACCAAGCTTCA 112846
||| || | || || || | || || || || |||| |||| || | || || | |
Sbjct 96539 TTCGCCTGTATCTCAGGGTATCCTGCAGTTCGACATGT-GGAACGTTACCCCTAG--TGA 96595
Query 112847 C---TACGACTGGGACGCTCTCAAGGAACGCATCAAGGAGAAGGGTCTTCGTAACAGTCT 112903
| | ||||||| | | |||||||||| |||||| || | || | || ||| ||
Sbjct 96596 CCTGTGGGACTGGGCCTCGCTCAAGGAACAGATCAAGCAGCACGGCGTGCGCAACTCGCT 96655
Query 112904 TTTGATGGCACCAATGCCAACAGCCTCCACCGCACAAATCTTGGGTAATAATGAATGCTT 112963
| |||| || |||||||| ||||| ||| | || ||| | || || || || |||||
Sbjct 96656 ACTCCTGGCTCCTATGCCAACTGCCTCGACCTCTCAGATCCTAGGCAACAACGAGTGCTT 96715
Query 112964 TGAACCCTACACGACGAACATCTA 112987
|| || ||||| ||||||||||
Sbjct 96716 CGAGCCTTACACCTCGAACATCTA 96739
>seq119
Length=69832
Score = 125 bits (138), Expect = 9e-24
Identities = 342/514 (67%), Gaps = 20/514 (4%)
Strand=Plus/Minus
Query 15878 GATCTTACGATCAAAGCGACCTGGGCGAAGGAGCGCGTCATCAAGGATATCAACGCGATT 15937
||| | |||||| || ||||| || | | | ||| | ||| |||||||| |||||||
Sbjct 35428 GATGTGACGATCGAAACGACCAGGTCTCATCAACGCCTTATCTAGGATATCCGCGCGATT 35369
Query 15938 CGTTGCGGCGATGACAACAATACCTGTTT--CGTTATCAAAACCATCCATCTCTGTCAAA 15995
|| | || | ||||| || ||| | || | | |||||||||||||| || |
Sbjct 35368 GGTACCAGCCAGCACAACGAT--CTGCTCAGCGGTGTTGAAACCATCCATCTCGGTTAGG 35311
Query 15996 AGCTGGTTAATAGTTTGTTCCCGTTCATCATT--CGCTGGC-ATACCACCAGCACTGCGT 16052
| |||||| | || || || || || || ||| | | |||| | || | | ||
Sbjct 35310 ATCTGGTTCAGCGTCGACTCGCGCTCGTCGTTACCGCCGCCCATACGATTAG-AGTCGGT 35252
Query 16053 TGCTTTCCCAC----GGCATCAATCTCATCAATGAAGACGATGCATGGTTGATTTTCGCG 16108
| || || |||||| || || |||||||||||||||||||| || | |||
Sbjct 35251 TCTGGACCGACCAATGGCATCGATTTCGTCAATGAAGACGATGCATGGAGAGTTCTTGCG 35192
Query 16109 AGCGACTTCAAAGAGATCCCGTACACGCTTGGCGCCCACACCAACAAACATCTCCACAAA 16168
||| |||| ||||| |||||||| || || ||||| |||||||||||||||||
Sbjct 35191 AGCTGTCGCAAACAGATCACGTACACGTGAGGGACCAACACCGACAAACATCTCCACAAA 35132
Query 16169 GTTTGCGGC-GGAACATTGGATGAAGGGGACATTAGATTCACCCGCAATGGCTCGGGCGA 16227
| | | ||| | || ||| || || || || || ||| | || ||| |
Sbjct 35131 CTCAGAACCACTCACACT-GAAGAAAGGCACTCCGGACTCGCCGGCAGTAGCCTTGGCCA 35073
Query 16228 GAAGAGTCTTACCCGTACCTGGCTTACCCGCGAGGAGGGCACCTCGTGGAATCTTGGCGC 16287
| || |||||||| ||||| || ||| | |||| |||||| || |||||||| || |
Sbjct 35072 GCAGTGTCTTACCGGTACCGGGAGGACCAGACAGGATGGCACCGCGAGGAATCTTAGCAC 35013
Query 16288 C---ACTTCCAAAGTATCTCTCAGGTTGCTTAAGAAAATCCACAATCTCTTCCAATTCAT 16344
| || |||| | ||||||| | ||| || || | ||||| ||| | |||
Sbjct 35012 CAAGACGCACAAACT---TCTCAGGCTTCTTGAGGAACTGCACAAACTCCATGATTTCCA 34956
Query 16345 CTTTGGCGGCGTCAATCCCCTCAACATCGGTAAA 16378
| ||||| |||| || || | ||||| | |||
Sbjct 34955 CCTTGGCTTCGTCCATACCGGCGACATCAGCAAA 34922
>seq7
Length=77910
Score = 123 bits (136), Expect = 3e-23
Identities = 348/523 (67%), Gaps = 11/523 (2%)
Strand=Plus/Plus
Query 101816 TTGGACTGCTGAAGAGGTAGATCTCTCAAAGGATTTGGACGATTGGAAGAC---TCTAAA 101872
|||||| ||||| ||| | ||||| || |||||| | |||| ||||| | |||||
Sbjct 72562 TTGGACCGCTGAGGAGATTGATCTATCCAAGGATCTCCACGACTGGAACAACCGTCTAAC 72621
Query 101873 TGAAAATGAAAAGAAATTCATAAAATACATCCTGGCATTCTTTGCTGGGTCCGATGGAAT 101932
| | || | | ||||| |||||||||| |||||||||| || ||||| ||
Sbjct 72622 CAAGGACGAGCAATACTTCATCTCCCACATCCTGGCTTTCTTTGCTGCCTCTGATGGTAT 72681
Query 101933 TGTTTTTGAGAATATCAATAACAACTTTGCTGATGAGGTGCA-ATCCTCTGAAGCGAGAT 101991
||| |||||| | | | || ||| |||||| || |||| | || || | |
Sbjct 72682 TGTCAACGAGAATCTGGTTGAGCGTTTCTCTGGTGAGGTCCAGATCCCC-GAGGCTCGCT 72740
Query 101992 CTTTCTATGCGTATCAATGTCATAATGAA-ATGGTGCATGGGGAGACATACAGTAAACTC 102050
||||| | || || | |||| ||| | | | || ||||| ||| | |
Sbjct 72741 GCTTCTACG-GTTTCCAGATCATGATGGAGAACATCCACTCCGAGACCTACTCCCTATTG 72799
Query 102051 ATAGACAAGTATATTAAGGATGGTGCTGAGAAGAAGCAGCTCTTTGAAGCCATCCAAACA 102110
|| || | || || ||||| |||| || | | || || | ||||| | ||
Sbjct 72800 ATCGATACTTACATCAAGGAGCCTGCTCAGCGCACATACCTGTTCAACGCCATTGACACC 72859
Query 102111 GTTCCATGTATTCAAAAGAAAGCGGATTGGGCTATGAAGTGG-TTTGATACAAAGTCGCG 102169
| || || || | || || |||||||| | |||||| |||| ||| || |
Sbjct 72860 ATCCCCTGCATCCGCCGTAAGGCTGATTGGGCCCTTAAGTGGATTTGCGACAGAGAATCC 72919
Query 102170 TTCCTTTGCTGAGCGACTCTTCGCATTTGCGTGTGTTGAGGGTATCTTCTTCTCTGGTTC 102229
|||| | |||| ||| | || ||||| ||| ||||||||||||||||||||| |
Sbjct 72920 A-CCTTCGGCCAGCGTCTCGTTGCCTTTGCTGCTGTCGAGGGTATCTTCTTCTCTGGTGC 72978
Query 102230 CTTCTGC-GCTATTTATTGGCTCAAGAAGCGAGGTCTCATGCCAGGTCTCTGCTTCTCCA 102288
||| ||| |||| | ||||| ||||| ||||| ||||| ||||| |||||| |
Sbjct 72979 CTT-TGCTTCTATCTTCTGGCTACGTAAGCGTGGTCTGATGCCTGGTCTGACCTTCTCTA 73037
Query 102289 ACGAGCTTATCTCTCGTGACGAGGGACTCCACCAAGAGTTTGC 102331
||||||||||||| ||||| ||||| | ||| ||| |||||
Sbjct 73038 ACGAGCTTATCTCCCGTGATGAGGGTTTGCACACAGATTTTGC 73080
>seq67
Length=164805
Score = 89.7 bits (98), Expect = 6e-13
Identities = 167/243 (69%), Gaps = 2/243 (1%)
Strand=Plus/Minus
Query 176018 GCATCCTTACCACCCATGAGACGCGTACCAAACTGACCACACGGCTC-AAGAAGATTGAT 176076
||||| |||||| ||||| | || || | ||||| || || ||| | |||||
Sbjct 30635 GCATCAGAACCACCGGCAAGACGAGATCCGAAGTTACCACTGGGTTCCAAGCA-ATTGAC 30577
Query 176077 ATTGTTTGAACCCATGTAGTCATTCGCCAACTTGACAATCGTGTCCGCGAGAGAGACTTC 176136
||||| || |||| | ||| | ||||| ||| ||| || | | ||||| ||||
Sbjct 30576 GTTGTTAGATCCCACGAAGTTCTGGGCCAAACTGATAATAGTCTGCTGCAGAGACGCTTC 30517
Query 176137 ACCGTGGTGGTACGCACTCTTCTCTGCGACAAATGCCGCCAACTGCGCCACTTTCATCTC 176196
|||||| ||||| ||| ||| | | |||| | | || |||| | || ||||| ||
Sbjct 30516 ACCGTGCTGGTAGGCAGTCTGACCAGAGACATAACCAGCTAACTCAACAACCTTCATATC 30457
Query 176197 ATCCTTGAGATTCTTGTGGAAACATGCGTACATAACCTTGCGTTGCGAAGGCTTGAGACC 176256
| || || ||| | | ||| || || || || ||||||||||| ||||||||||||
Sbjct 30456 CTTCTGGATATTGCTCTTGAAGCAAGCATAAATGACCTTGCGTTGACCAGGCTTGAGACC 30397
Query 176257 ATC 176259
||
Sbjct 30396 GTC 30394
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 620738047043920
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