Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Davidsoniella_20virescens_20[genbank_20GCA_5F001513805.1_202016-01-
13] 561 sequences; 33,427,969 total letters
Query= NC_015398.1
Length=101487
Score E
Sequences producing significant alignments: (Bits) Value
seq542 98.7 6e-16
>seq542
Length=123657
Score = 98.7 bits (108), Expect = 6e-16
Identities = 137/192 (71%), Gaps = 0/192 (0%)
Strand=Plus/Minus
Query 34791 TCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAAT 34850
|| ||||| ||||| ||||| || || | ||| | || |||||||| || || || ||
Sbjct 107109 TCCTTCTGGATGTTGTAGTCAGACAGAGTACGTCCGTCCTCCAGCTGCTTACCAGCGAAA 107050
Query 34851 ATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGAT 34910
|| || || |||||||| | || | ||||||||||| |||||| || |||
Sbjct 107049 ATGAGACGCTGCTGGTCCGGAGGAATACCCTCCTTGTCCTGAATCTTGGACTTCACGTTG 106990
Query 34911 GCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCACA 34970
| || | || | ||||| |||| || ||||| || || ||||||||||| |||
Sbjct 106989 TCAATGGTATCTGAAGATTCAACCTCGAGAGTGATGGTCTTGCCAGTGAGAGTCTTGACA 106930
Query 34971 AAGATCTGCATA 34982
||||||||||||
Sbjct 106929 AAGATCTGCATA 106918
Score = 86.0 bits (94), Expect = 4e-12
Identities = 134/192 (70%), Gaps = 0/192 (0%)
Strand=Plus/Minus
Query 34791 TCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAAT 34850
|| || |||||||| ||||| || ||| | || | || |||||||| || || || ||
Sbjct 107337 TCCTTTTGAATGTTGTAGTCGGATAGGGTGCGACCGTCCTCCAGCTGCTTACCAGCGAAG 107278
Query 34851 ATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGAT 34910
|| || || || ||||| | || | ||||||||||| ||||| || |||
Sbjct 107277 ATGAGACGCTGTTGGTCCGGGGGAATACCCTCCTTGTCCTGGATCTTGGACTTCACGTTG 107218
Query 34911 GCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCACA 34970
| || | || | ||| || || | || ||||| || || ||||||||||| |||
Sbjct 107217 TCAATGGTGTCGGAAGACTCGACCTCAAGAGTGATGGTCTTGCCAGTGAGAGTCTTGACA 107158
Query 34971 AAGATCTGCATA 34982
||||||||||||
Sbjct 107157 AAGATCTGCATA 107146
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 324631380419208
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |