Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Davidsoniella_20virescens_20[genbank_20GCA_5F001513805.1_202016-01- 13] 561 sequences; 33,427,969 total letters Query= NC_015960.1 Length=175699 Score E Sequences producing significant alignments: (Bits) Value seq7 131 2e-25 >seq7 Length=77910 Score = 131 bits (144), Expect = 2e-25 Identities = 370/566 (65%), Gaps = 3/566 (1%) Strand=Plus/Minus Query 18952 AACATCAAACATGCAAAATCACAATGTAGTCCCTCGTCTCTACTTATCAATTCATTAGAA 19011 |||| ||| || |||||||| || | ||||| || | || | || ||||| Sbjct 73092 AACAACAAGCAAGCAAAATCTGTGTGCAAACCCTCATCACGGGAGATAAGCTCGTTAGAG 73033 Query 19012 AATGTTAAACCAGGCATCAGTCCTCttttttttAACCAGAATATAGAAGCAAATGATCCA 19071 || || | |||||||||||| || | || || |||||| ||||||||||| | ||| Sbjct 73032 AAGGTCAGACCAGGCATCAGACCACGCTTACGTAGCCAGAAGATAGAAGCAAAGGCACCA 72973 Query 19072 GAAAAGAATATACCTTCTACTGCTGCAAAAGCAACTAGTCTTTCTCCATAACTAGCATCA 19131 || ||||| ||||| || || || ||||| ||||| || | | || | | | || Sbjct 72972 GAGAAGAAGATACCCTCGACAGCAGCAAAGGCAACGAGACGCTGGCCGAAGGTGGATTCT 72913 Query 19132 TTATTATGAATCCATTTCAGTGCCCAATCAGCCTTCTTTTTTACACATGGCATTGTCTCT 19191 | | |||||| || || |||||||||||||| | || || || || || Sbjct 72912 CTGTCGCAAATCCACTTAAGGGCCCAATCAGCCTTACGGCGGATGCAGGGGATGGTGTCA 72853 Query 19192 ATAGAATTAAATAGATACATACGCTCATCTGTATCTTTAACATATGCATCTATCAATAAA 19251 || | || || || || | |||| | | | || || | || | ||| ||||||| Sbjct 72852 ATGGCGTTGAACAGGTATGTGCGCTGAGCAGGCTCCTTGATGTAAGTATCGATCAATAGG 72793 Query 19252 CTGTACATTTCTGAATGAATATTTTCTATAGCCATCTGAAATCCGTAAAAACATCTTGCT 19311 ||| | || || || || || || || ||||| || ||||| || || | || Sbjct 72792 GAGTAGGTCTCGGAGTGGATGTTCTCCATCATGATCTGGAAACCGTAGAAGCAGCGAGCC 72733 Query 19312 TCTGTTATCTGTACTTCACTACAAAATCTTTCGACCAAATTTTCATTAACTATTCCATCA 19371 || | ||||| || |||| | | || | || |||| ||| || || || || |||||| Sbjct 72732 TCGGGGATCTGGACCTCACCAGAGAAACGCTCAACCAGATTCTCGTTGACAATACCATCA 72673 Query 19372 CTAGCTGCAAAAAATGCTAATACATGTTTAATAAAATGTTTTTCATCTGAGGTTA-ATG- 19429 || ||||| || || | | || || || | || || || ||||| | | Sbjct 72672 GAGGCAGCAAAGAAAGCCAGGATGTGGGAGATGAAGTATTGCTCGTCCTTGGTTAGACGG 72613 Query 19430 -TATTCCAATCATTAATATCTTTAGATAAATCTACTTCTTCAACTGTCCAAAAAGAAGCC 19488 | ||||| || | | ||| || |||| ||| | || ||| | ||||||||||| ||| Sbjct 72612 TTGTTCCAGTCGTGGAGATCCTTGGATAGATCAATCTCCTCAGCGGTCCAAAAAGATGCC 72553 Query 19489 TCTGCTTTTTTATACATGTTCCATAT 19514 || || || || ||||| | ||| || Sbjct 72552 TCGGCCTTCTTGTACATCTGCCAGAT 72527 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 562104858212040