Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Davidsoniella_20virescens_20[genbank_20GCA_5F001513805.1_202016-01-
13] 561 sequences; 33,427,969 total letters
Query= NC_015960.1
Length=175699
Score E
Sequences producing significant alignments: (Bits) Value
seq7 131 2e-25
>seq7
Length=77910
Score = 131 bits (144), Expect = 2e-25
Identities = 370/566 (65%), Gaps = 3/566 (1%)
Strand=Plus/Minus
Query 18952 AACATCAAACATGCAAAATCACAATGTAGTCCCTCGTCTCTACTTATCAATTCATTAGAA 19011
|||| ||| || |||||||| || | ||||| || | || | || |||||
Sbjct 73092 AACAACAAGCAAGCAAAATCTGTGTGCAAACCCTCATCACGGGAGATAAGCTCGTTAGAG 73033
Query 19012 AATGTTAAACCAGGCATCAGTCCTCttttttttAACCAGAATATAGAAGCAAATGATCCA 19071
|| || | |||||||||||| || | || || |||||| ||||||||||| | |||
Sbjct 73032 AAGGTCAGACCAGGCATCAGACCACGCTTACGTAGCCAGAAGATAGAAGCAAAGGCACCA 72973
Query 19072 GAAAAGAATATACCTTCTACTGCTGCAAAAGCAACTAGTCTTTCTCCATAACTAGCATCA 19131
|| ||||| ||||| || || || ||||| ||||| || | | || | | | ||
Sbjct 72972 GAGAAGAAGATACCCTCGACAGCAGCAAAGGCAACGAGACGCTGGCCGAAGGTGGATTCT 72913
Query 19132 TTATTATGAATCCATTTCAGTGCCCAATCAGCCTTCTTTTTTACACATGGCATTGTCTCT 19191
| | |||||| || || |||||||||||||| | || || || || ||
Sbjct 72912 CTGTCGCAAATCCACTTAAGGGCCCAATCAGCCTTACGGCGGATGCAGGGGATGGTGTCA 72853
Query 19192 ATAGAATTAAATAGATACATACGCTCATCTGTATCTTTAACATATGCATCTATCAATAAA 19251
|| | || || || || | |||| | | | || || | || | ||| |||||||
Sbjct 72852 ATGGCGTTGAACAGGTATGTGCGCTGAGCAGGCTCCTTGATGTAAGTATCGATCAATAGG 72793
Query 19252 CTGTACATTTCTGAATGAATATTTTCTATAGCCATCTGAAATCCGTAAAAACATCTTGCT 19311
||| | || || || || || || || ||||| || ||||| || || | ||
Sbjct 72792 GAGTAGGTCTCGGAGTGGATGTTCTCCATCATGATCTGGAAACCGTAGAAGCAGCGAGCC 72733
Query 19312 TCTGTTATCTGTACTTCACTACAAAATCTTTCGACCAAATTTTCATTAACTATTCCATCA 19371
|| | ||||| || |||| | | || | || |||| ||| || || || || ||||||
Sbjct 72732 TCGGGGATCTGGACCTCACCAGAGAAACGCTCAACCAGATTCTCGTTGACAATACCATCA 72673
Query 19372 CTAGCTGCAAAAAATGCTAATACATGTTTAATAAAATGTTTTTCATCTGAGGTTA-ATG- 19429
|| ||||| || || | | || || || | || || || ||||| | |
Sbjct 72672 GAGGCAGCAAAGAAAGCCAGGATGTGGGAGATGAAGTATTGCTCGTCCTTGGTTAGACGG 72613
Query 19430 -TATTCCAATCATTAATATCTTTAGATAAATCTACTTCTTCAACTGTCCAAAAAGAAGCC 19488
| ||||| || | | ||| || |||| ||| | || ||| | ||||||||||| |||
Sbjct 72612 TTGTTCCAGTCGTGGAGATCCTTGGATAGATCAATCTCCTCAGCGGTCCAAAAAGATGCC 72553
Query 19489 TCTGCTTTTTTATACATGTTCCATAT 19514
|| || || || ||||| | ||| ||
Sbjct 72552 TCGGCCTTCTTGTACATCTGCCAGAT 72527
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 562104858212040
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |