Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Davidsoniella_20virescens_20[genbank_20GCA_5F001513805.1_202016-01-
13] 561 sequences; 33,427,969 total letters
Query= NC_019495.1
Length=290304
Score E
Sequences producing significant alignments: (Bits) Value
seq7 239 8e-58
seq85 199 7e-46
>seq7
Length=77910
Score = 239 bits (264), Expect = 8e-58
Identities = 573/860 (67%), Gaps = 28/860 (3%)
Strand=Plus/Plus
Query 25477 ATATGGGAGATGTACAAGAAGGCTCAAAACTCAAACTGGACCGCCGAAGAGATTGATCTG 25536
|| ||| |||||||||||||||| | || |||||||| || |||||||||||
Sbjct 72527 ATCTGGCAGATGTACAAGAAGGCCGAGGCATCTTTTTGGACCGCTGAGGAGATTGATCTA 72586
Query 25537 GCCAAGGACATGGACGGCTGGTACGC---TCTATCCAAAGACGAGCAGCATTTTCTCAAG 25593
||||||| | ||| |||| || |||| |||| |||||||| | || ||
Sbjct 72587 TCCAAGGATCTCCACGACTGGAACAACCGTCTAACCAAGGACGAGCAATACTTCATCTCC 72646
Query 25594 TACGTGTTGGCATTCTTTGCAGCCTCTGATGGTATAGTGAACGAGAATCTGTGCGAGAGA 25653
|| | |||| |||||||| |||||||||||||| || |||||||||||| ||| |
Sbjct 72647 CACATCCTGGCTTTCTTTGCTGCCTCTGATGGTATTGTCAACGAGAATCTGGTTGAGCGT 72706
Query 25654 TTCACCAGGGAAGTGCAGTACGTGGAGGCCAAGTGTTTCTACGGTTTCCAGATGGCCATC 25713
||| | | || || ||| | ||||| || ||||||||||||||||| ||
Sbjct 72707 TTCTCTGGTGAGGTCCAGATCCCCGAGGCTCGCTGCTTCTACGGTTTCCAGATCATGATG 72766
Query 25714 GAAAATGTGCACTCTGAGGTGTATGCCAAGCTTCTGAT---GACGTACATTACAGACGTC 25770
|| || | ||||| ||| || || || |||| || ||||| | ||
Sbjct 72767 GAGAACATCCACTCCGAGACCTACTCC---CTATTGATCGATACTTACATCAAGGAGCCT 72823
Query 25771 GCCGAGAG-AGATCGGCTGTTTGGTGCCATCGAGCACATACCCAGCATCAAGAGGAAGGC 25829
|| || | | || ||||| ||||| || ||| ||| ||||| | |||||
Sbjct 72824 GCTCAGCGCACAT-ACCTGTTCAACGCCATTGACACCATCCCCTGCATCCGCCGTAAGGC 72882
Query 25830 GCGGTGGGCCATGAAGTGGATCAACAGCCAGAG-CGCTACGTTTGGCGAGCGGCTGGTAG 25888
|||||| | |||||||| | | ||||| | || || ||| |||| || || |
Sbjct 72883 TGATTGGGCCCTTAAGTGGATTTGC-GACAGAGAATCCACCTTCGGCCAGCGTCTCGTTG 72941
Query 25889 CCTTTGCTGCTGTGGAGGGCATCTTTTTCAGCGGTTCGTTTGCGGCCATCTTCTGGCTCA 25948
||||||||||||| ||||| ||||| ||| ||| | ||||| | ||||||||||| |
Sbjct 72942 CCTTTGCTGCTGTCGAGGGTATCTTCTTCTCTGGTGCCTTTGCTTCTATCTTCTGGCT-A 73000
Query 25949 AGCAGAAGGGGAC-CATGCCCGGGCTGTACTTTTCCAACGAGCTCATCAGCAGGGACGAG 26007
| | | || | ||||| || ||| ||| || |||||||| ||| | | || |||
Sbjct 73001 CGTAAGCGTGGTCTGATGCCTGGTCTGACCTTCTCTAACGAGCTTATCTCCCGTGATGAG 73060
Query 26008 GGTCTCCACAGAGATTTTGCCTGCCTGCTCTACACGGGCCACTTGCTCCACAAACCTTCT 26067
||| | |||| ||||||||| ||| || | | | || |||||| |||| | | ||
Sbjct 73061 GGTTTGCACACAGATTTTGCTTGCTTGTTGTTCTCG---CACTTG---AACAACCGTCCT 73114
Query 26068 --CAAGAGAC-CGTCTACAGTATCATCAAAGAGGCTGTGGAGATCGAGAAGGAGTTTCNN 26124
|||| || ||| | | || |||| || ||||| | ||||||||||||||
Sbjct 73115 AGCAAGGAACTGGTCGAAAAGATTATCACTGATGCTGTTGTCATCGAGAAGGAGTTCTTA 73174
Query 26125 NNNNNNNNNNNNNNNNNNNNNNNNNTGGGCATGAACAACAGACTCATGAGCCAATACATT 26184
| ||||||||| | || |||| || ||||||
Sbjct 73175 ACTGAGGCTCTTCCTTGCGGTCTGCTAGGCATGAACGCCGATCTGATGAAGCAGTACATT 73234
Query 26185 GAGTATGTGGCCGACCATCTGCTG--TGCCAGCTGGGACTCGCCAGACTCTACAGTACGC 26242
|||| || || |||| ||| ||| |||| || || || || | | ||| || |
Sbjct 73235 GAGTTCGTTGCTGACCGTCTCCTGGTTGCC--CTTGGCAACGACAAAGTGTACCGTGCTA 73292
Query 26243 CTAACCCGTTCGACTTTATGGAAAACATATCGTTGGAAGGGAAGACCAACTTCTTTGAAA 26302
| ||||| |||||||| ||||| ||||| || ||| ||| ||||||||||||||||| |
Sbjct 73293 CAAACCCCTTCGACTTCATGGAGAACATTTCTCTGGGAGGCAAGACCAACTTCTTTGAGA 73352
Query 26303 AGAGGGTCGGCGACTATCAA 26322
|| | || || ||||| |||
Sbjct 73353 AGCGTGTTGGTGACTACCAA 73372
>seq85
Length=153405
Score = 199 bits (220), Expect = 7e-46
Identities = 824/1280 (64%), Gaps = 51/1280 (4%)
Strand=Plus/Minus
Query 221417 GTCAGGGCAGCGTGGTAGATGGTCTCAAAGATCATCTTGTTGAGTCTCTTGGCCTCGGGA 221476
|||||||||||||||||||||||||| |||||| |||||| || | |||||||| |
Sbjct 96487 GTCAGGGCAGCGTGGTAGATGGTCTCGAAGATCTGCTTGTTCAGAGTGCGGGCCTCGGCA 96428
Query 221477 GAAGTGAAGGGCATACGCAGCA-TCTGAAAGACGTCGGCCAGTCCCTGTACTCCGATACC 221535
|| ||| ||||| || || | ||||| | ||||| || ||||| || || | |||
Sbjct 96427 GACTCGAAAGGCATGCGTAGGGCTAGGAAAG-CATCGGCTAGACCCTGGACACCAACACC 96369
Query 221536 GATGGGCCTGTGTCTCCTGTTGGAAGCGGCCGCTTCTGGCACGGGATAAAAGTTGACGTC 221595
||||| | || | | ||||| | || || ||||| || || |||||| ||
Sbjct 96368 AATGGGGCGATGACGCATGTTGCTGTTGTGAGCCTCAGGCACAGGGTAGTGGTTGACATC 96309
Query 221596 GATCAGATTGTTGAGGTTCAGAGTGATGACTTTAACCACCTCGGTCAGCTTCTGGTGATT 221655
||| | || ||||| | || || || | |||| |||||||||| ||
Sbjct 96308 GATAATGCGATTCAGGTTACGCACGACCACCTTGGTGATCTCGTGCAGCTTCTGGAAATC 96249
Query 221656 GAACACCAACTCGCCGCCGTCGTGGAGGGGTTCCACAAAAGCGTTTAGGGCAACGCTGGC 221715
| || || || || || | || ||||| | |||||| | |||
Sbjct 96248 GTAC------TCTCCTTTGTTGTAG------TCGACAAAGGATGGTAGGGCTAGCGAGGC 96201
Query 221716 CAGGTTACACACGGCCACCTCGTCCTTGTTGGTATACTGTATGATCTCTGTACAGAGGTT 221775
||||| || ||||| ||||| || | |||| ||||| || || || || ||
Sbjct 96200 TAGGTTGCATACGGCAACCTCATCGGGAGCGCAGTACTCGATGATTTCAGTGCATAGATT 96141
Query 221776 GCTGCACTTGATGGTCCCCAGGTGATTGTGATTAGACTTGCGATTGGCAGCGTCCTTGTA 221835
| || ||| || || |||| || || || ||| ||| |||||||||||
Sbjct 96140 GGAGCTGCGGATAGTGCCTAGGTTTTTCTGGTTGCTCTTCTTGTTGCAGGCGTCCTTGTA 96081
Query 221836 GAGCATAAAGGGACCGCCAGTCTCCAGCTGAGCCACCAGAATCTTGTCCCAGAG-TTCTC 221894
||||| || || ||| ||||| ||| ||| | ||||| || ||| || ||||
Sbjct 96080 CAGCATGAATGGGTTGCCGGTCTCGGTCTGGGCCTCGAGAATGGCGTACCACAGCTTCTG 96021
Query 221895 TGGC-----GCTCAC-CGTCCTCTTGACTGCACCCTCGGTCTTTTCATACCCGGTATAGA 221948
| | | | | || || | | || ||| |||| ||| |||||| |||
Sbjct 96020 GGCCTTGATGGTAAGACGGCCACG-GCCTTCACTCTCGTACTTCTCATAC-------AGA 95969
Query 221949 GCATGTCAAACTTTTCACCGTACGCCTCGTCCAGGCCTGGACACCTGGCGGGACACATCA 222008
|| | | |||| || ||||| || | || || || ||| || ||||| |
Sbjct 95968 GCCT--CGAACTCCTCGCCGTAGCAATCAGCTAGTCCAGGGCACTCATTAGGGCACATGA 95911
Query 222009 GACTCCAGTGCTTGTTGTCTTTGACCCTCTGCATGAAGAGGTCCGGGATCCACAGCGCCT 222068
| |||||| ||| | || ||| | || |||||| || || || |||||||| ||
Sbjct 95910 GTGTCCAGTTGGCGTTCTTTTCGACACGCTTCATGAACAGATCGGGAATCCACAGTGCTA 95851
Query 222069 GAAAGAGATCTCTGGTCCGCTGCTCCTCCACGCCGTTGTTTTTCCTCAGATCCAAAAACT 222128
| || ||||| | || || ||||||| ||||| ||| || | |||||| | ||||
Sbjct 95850 GGAACAGATCACGGGCACGAATCTCCTCCTTGCCGTGGTTCTTGCGCAGATCAAGGAACT 95791
Query 222129 CAAAAATGTCAGCGTGCCACGGCTCCAGATAGACGGCCAGAGCGCCGGGTCGCTTGTTGC 222188
| || | || ||||||||||||||||| || | ||| | || ||||| |||||||| |
Sbjct 95790 CGAACACATCGGCGTGCCACGGCTCCAGGTAAATGGCAAAGGCACCGGGGCGCTTGTTAC 95731
Query 222189 CACCCTGATCCACCATCCTCTCCAGAG-CGTTGAAGATGCGAAGGGTCGGTACCAGTCCG 222247
||||||| || | | | ||| | |||||||| || || | || || | |||
Sbjct 95730 CACCCTGGTCGA-CGTAGCGGGCAGTGTTGTTGAAGACACGCAGCATGGGAACAATGCCG 95672
Query 222248 TTGGATCGACCGTTGGTGCCCTTAATGTACGCACCGCCGGCCCTCAGGTTAC--TGG-CA 222304
|| || ||||||||||| |||||||| || ||| | || ||| ||| |
Sbjct 95671 TTAGACGTGCCGTTGGTGCCAGCAATGTACGAGCCAGTGGCAC---GGATACGGTGGACG 95615
Query 222305 GACATGCCGATACCACCGGCGTGTTTCGAGATCATGGCGCAGCTCTTGAGAGTGTCCATG 222364
|| |||||||| ||||| || |||||||| || || |||| || || || |
Sbjct 95614 TTCAGACCGATACCGCCGGCCATCTTGGAGATCATAGCACAAGTCTTCAGCGTATCGTAG 95555
Query 222365 ATGCCCTCCATAGAGTCCTCCTTGACGTTCAGCAGAAAACAAGACGACATCTGAG-ATTT 222423
|| || || || ||| ||||| | | | || || || ||||| | ||| | |
Sbjct 95554 ATACCATCAATGCTGTCGTCCTTCATATCAACTAGGAAGCACGACGATAGCTGGGCCTGC 95495
Query 222424 GGTGGAACAGGCGTTAAACAGCGTGGGACTGGCGTGTGTAAAGTAGCCCCTAGACATCAG 222483
|||| || ||||| || |||||||| ||||||||| ||| | || |||||
Sbjct 95494 GGTGTGCCA-GCGTTGAATAGCGTGGGCGAGGCGTGTGTGAAGAACTTGCTTGACATGTA 95436
Query 222484 ATCGTACGTCTCTACGACTCTGGCGATGTTGTC-CCCGTGAATCTGC--ATGGCGCATCT 222540
| ||| ||||| | || | | | | | ||| ||| || ||| | ||| |
Sbjct 95435 GTTGTAAGTCTCGAGCACACGGTCAACGCGGTCACCCCAGA---TGCCAACGGCCACACG 95379
Query 222541 CATGTACATGTACTGGGGCCTCTCCACA--GGACCCTTGGAGCTGGAGAGCAGGTACGAT 222598
|||| ||||| ||| || | ||| ||| || | |||| |||||||||||
Sbjct 95378 CATGATCATGTGCTGCGGACGCTCGACAATCTTGCCGTCTAGCT--TAAGCAGGTACGAA 95321
Query 222599 TTTTCCAGAGTCTTGAACCCAAAGTAGTTGAGGTCAAAGTCTCTGCCGTGAACCACGGCG 222658
|| || |||||||| |||||||| | | || ||||| | ||| || | |||
Sbjct 95320 CGCTCTAGGGTCTTGAAGCCAAAGTACTGGTAGTTGAAGTCACGATCGTACACAATGGCA 95261
Query 222659 GCGTCCAGCTCCGACTTGTG 222678
| ||||||||| ||||||
Sbjct 95260 GAGTCCAGCTCTTCCTTGTG 95241
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 928838286475840
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