Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Davidsoniella_20virescens_20[genbank_20GCA_5F001513805.1_202016-01-
13] 561 sequences; 33,427,969 total letters
Query= NC_020852.1
Length=186468
Score E
Sequences producing significant alignments: (Bits) Value
seq85 141 1e-28
seq7 107 2e-18
seq119 95.1 1e-14
>seq85
Length=153405
Score = 141 bits (156), Expect = 1e-28
Identities = 888/1405 (63%), Gaps = 51/1405 (4%)
Strand=Plus/Plus
Query 75212 CCACAGTACATGTTCATGCGGGTCGCAATCGGCATCCACGGGGAAGACATTGATTCTGTC 75271
|| ||| ||||| ||||||| || || | |||||| || || | |||| |||
Sbjct 95361 CCGCAGCACATGATCATGCGTGTGGCCGTTGGCATCTGGGGTGACCGCGTTGACCGTGTG 95420
Query 75272 TTGGAGACATACGACAAGATGTCC--CAAGGTATGTTCATTCACGCAACACCAACCCTCT 75329
| ||||| ||| || | ||||| |||| | | ||| ||||| | || || || |
Sbjct 95421 CTCGAGACTTACAACTACATGTCAAGCAAGTTCT--TCACACACGCCTCGCCCACGCTAT 95478
Query 75330 TCAATGCTGGTACACCA-AGACCGCAGATGTCCAGTTGCTTCCTTATCGCCAACAAGGAG 75388
|||| ||||| ||||| || || ||| | || |||||||| | | | |||||
Sbjct 95479 TCAACGCTGGCACACCGCAGGCC-CAGCTATCGTCGTGCTTCCTAGTTGATATGAAGGAC 95537
Query 75389 GACTCAATCAACGGTATCTATGGAACTCTTACGGAGTGTGCGCAAATCTCAAAGTGGGCT 75448
||| || | |||||||| | || || | | ||||| ||||| ||| |||
Sbjct 95538 GACAGCATTGATGGTATCTACGATACGCTGAAGACTTGTGCTATGATCTCCAAGATGGCC 95597
Query 75449 GGGGGTATTGGGATGCACATCCATGATGTGAGAGCCAATAAATCTCGTA--TTCGGGGGA 75506
|| ||||| || || || |||| | | | |||| | |||||| || || |
Sbjct 95598 GGCGGTATCGGTCTGAACGTCCACCGTATCCGTGCCACTGG--CTCGTACATTGCTGGCA 95655
Query 75507 CAAATGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCGCT 75566
| || || || | || ||| |||| ||||| || || || ||| ||| || ||||
Sbjct 95656 CCAACGGCACGTCTAACGGCATTGTTCCCATGCTGCGTGTCTTCAACAACACTGCCCGCT 95715
Query 75567 ATGTAAATCAAGCGGGGCGTCGCAAGGG-----GT-CCATCGCGGTCTACTTGGAACCAT 75620
| || | || ||| || |||| | || || | || | ||| |||| || |
Sbjct 95716 ACGTCGACCA---GGGTGGTAACAAGCGCCCCGGTGCCTTTGCCATTTACCTGGAGCCGT 95772
Query 75621 GGCATGCCGATATCATGGAGTTCCTTGAGTTACGACTCAACCAAGGTGACGAAGAGGCTC 75680
|||| |||||| | | ||||||||||| | || ||||| || | || ||| ||
Sbjct 95773 GGCACGCCGATGTGTTCGAGTTCCTTGATCTGCGCAAGAACCACGGCAAGGAGGAGATTC 95832
Query 75681 GGTGTAGAGATCTCTTTTCATCCCTGTGGATTCCAGACCTTTTCATGAAGCGGGTTGAGG 75740
| | ||||| || | | ||||||||||| || || ||||||||||| || ||
Sbjct 95833 GTGCCCGTGATCTGTTCCTAGCACTGTGGATTCCCGATCTGTTCATGAAGCGTGTCGAAA 95892
Query 75741 AGGGTGGTCAATGGTCTCTTTTCTGTCCAGACAAGGCACCAGGTCTCTCCGACGCGGTGG 75800
|| | | ||| | || | || || | || || || || | || |
Sbjct 95893 AGAACGCCAACTGGACACTCATGTGCCCTAATGAGTGCCCTGGACTAGCTGATTGCTACG 95952
Query 75801 GTGAGGAGTTTGAAGCCCTCTACACAAAGTATGAAGAGGAGGGTAGAGCCAATGC-GACT 75859
| |||||||| || || || || ||||| || ||| | || ||| || | ||
Sbjct 95953 GCGAGGAGTTCGAGGCTCTGTATGAGAAGTACGA----GAGTGAAG-GCCGTGGCCGTCT 96007
Query 75860 GTACCAGCC--GCC--GATGTT-TGGAAGGCTATTCTCAAATCACAGACGGAGACTGGAA 75914
||||| | ||| || | | ||| | || |||||| | | ||||| ||||| || |
Sbjct 96008 -TACCATCAAGGCCCAGAAGCTGTGGTACGCCATTCTCGAGGCCCAGACCGAGACCGGCA 96066
Query 75915 CACCATATATGCTTTACAAGGATGCTTGTAACAAGAAGAGTAACCAAAAGAATTTGGGAA 75974
|||| ||||| |||||||| || || ||||||||||| ||||| || || | || |
Sbjct 96067 ACCCATTCATGCTGTACAAGGACGCCTGCAACAAGAAGAGCAACCAGAAAAACCTAGGCA 96126
Query 75975 CAATCAAGAGCTCAAATCTTTGCACGGAAATTTTAGAGTACACAGATAAGGATGAGACGG 76034
| ||| ||||| ||||| ||||| ||||| | |||||| | | |||||| |
Sbjct 96127 CTATCCGCAGCTCCAATCTATGCACTGAAATCATCGAGTACTGCGCTCCCGATGAGGTTG 96186
Query 76035 CTGTTTGCAATTTGGCATCAATCGCCCTTCCAAAGTATGTCAATGAAGAGACTCGCACTT 76094
| || ||||| | || || | ||||| ||| | |||| | | | | | |
Sbjct 96187 CCGTATGCAACCTAGCCTCGCTAGCCCTACCATCCTTTGTCGACTACAACAAAGGAGAGT 96246
Query 76095 TTGATTATGAAAAACTTCATGAAATCACAAAGATTGTTACCAAAAATCTAAACCGAGTCA 76154
|||| | || || || || ||||| ||| | || || || || || | |
Sbjct 96247 ACGATTTCCAGAAGCTGCACGAGATCACCAAGGTGGTCGTGCGTAACCTGAATCGCATTA 96306
Query 76155 TTGACAGAAATTTTTATCCCGT---TGAGACTGCGCGAAAGTCTAATATGCGACACAGAC 76211
| || || || || || |||| || | | | || || ||||| || | |
Sbjct 96307 TCGATGTCAACCACTACCCTGTGCCTGAGGCT-CACAACAG--CAACATGCGTCATCGCC 96363
Query 76212 CTATTGGTTTGGGTGTTCAAGGTCTCGCGGATGTATTTATTTTGTGCCGCTACGCA---- 76267
| |||||| | ||||| || ||||| || |||| ||| | | |||||||
Sbjct 96364 CCATTGGTGTTGGTGTCCAGGGTCTAGCCGATG-----CTTTCCTAGCCCTACGCATGCC 96418
Query 76268 -TTTGATTCAGATGAAGCCAAGGAGATGAATGCTCGTATCTTTGAAACCATGTATCACGC 76326
|| || || | || ||| |||| | ||||| || ||||| || |||||
Sbjct 96419 TTTCGAGTCTGCCGAGGCCCGCACTCTGAACAAGCAGATCTTCGAGACCATCTACCACGC 96478
Query 76327 ATCCCTGGAGGCGAGTTGTGAATTGGCTGAAGCCCAAGGTTCCTATGAGACATTTGAGGG 76386
||||| || || || | ||| || || | ||| | || || | ||||||
Sbjct 96479 TGCCCTGACTGCCTCGTGCGAGATTGCTCAAACCGAGGGTACTTACTCCACCTATGAGGG 96538
Query 76387 TTCTCCCGCGTCCCAAGGGGTGCTTCAGTTTGATATGTGGGAAGGTGAAACCAAGCTCAA 76446
||| || | || || || | || ||||| || |||| |||| || | || || | |
Sbjct 96539 TTCGCCTGTATCTCAGGGTATCCTGCAGTTCGACATGT-GGAACGTTACCCCTAG-TGAC 96596
Query 76447 C--TACGACTGGGATGTTCTCAAGGAACGCATCAAGGAGAAGGGTCTTCGTAACAGTCTT 76504
| | ||||||| |||||||||| |||||| || | || | || ||| ||
Sbjct 96597 CTGTGGGACTGGGCCTCGCTCAAGGAACAGATCAAGCAGCACGGCGTGCGCAACTCGCTA 96656
Query 76505 TTGATGGCACCAATGCCAACAGCCTCCACCGCACAAATCTTGGGTAATAATGAATGCTTT 76564
| |||| || |||||||| ||||| ||| | || ||| | || || || || |||||
Sbjct 96657 CTCCTGGCTCCTATGCCAACTGCCTCGACCTCTCAGATCCTAGGCAACAACGAGTGCTTC 96716
Query 76565 GAACCATACACAACAAACATCTACC 76589
|| || ||||| | ||||||||||
Sbjct 96717 GAGCCTTACACCTCGAACATCTACC 96741
>seq7
Length=77910
Score = 107 bits (118), Expect = 2e-18
Identities = 526/821 (64%), Gaps = 31/821 (4%)
Strand=Plus/Plus
Query 64713 TTGGACTGCGGAAGAAGTTGATTTGTCCAAAGATCTTGACGACTGGAAGACCCTGAATGA 64772
|||||| || || || ||||| | ||||| ||||| |||||||||| | || | | |
Sbjct 72562 TTGGACCGCTGAGGAGATTGATCTATCCAAGGATCTCCACGACTGGAACAACC-GTCTAA 72620
Query 64773 A-AATGAAAAGAAATTCATAAAGT---ACATCCTGGCATTCTTTGCTGGGTCCGATGGAA 64828
|| || || ||| | | | | |||||||||| |||||||||| || ||||| |
Sbjct 72621 CCAAGGACGAGCAATACTTCATCTCCCACATCCTGGCTTTCTTTGCTGCCTCTGATGGTA 72680
Query 64829 TTGTTTTTGAGAATATCAATAACAATTTTGCGGATGAAGTGCAGATAAGCGAAGCGCGCT 64888
|||| |||||| | | | ||| | | ||| || ||||| ||| || ||||
Sbjct 72681 TTGTCAACGAGAATCTGGTTGAGCGTTTCTCTGGTGAGGTCCAGATCCCCGAGGCTCGCT 72740
Query 64889 CATTCTACGCATATCAATGCCATAATGAA-ATGGTTCATGGCGAAACATATTCAAAATTG 64947
||||||| | || | ||| ||| | | | || ||| || || || ||||
Sbjct 72741 GCTTCTACGGTT-TCCAGATCATGATGGAGAACATCCACTCCGAGACCTACTCCCTATTG 72799
Query 64948 ATTGACAAATACATTAAGGATGGATCTGAAAAGAAGCAGTTATTTG----AAGCCATCCA 65003
|| || | ||||| ||||| ||| || ||| || || | ||||| |
Sbjct 72800 ATCGATACTTACATCAAGGAGC---CTGCTCAGC-GCACATACCTGTTCAACGCCATTGA 72855
Query 65004 AACTGTACCATGTATTGAGAAGAAGGCGAAATGGGCAATGAAATGG-TTTGACACAAAGT 65062
|| | || || || ||||| | ||||| | || ||| |||| ||| ||
Sbjct 72856 CACCATCCCCTGCATCCGCCGTAAGGCTGATTGGGCCCTTAAGTGGATTTGCGACAGAGA 72915
Query 65063 CTCGCTCCTTCGCCGAGCGCCTTTTTGCGTTTGCGTGTGTGGAGGGTATCTTCTTCTCCG 65122
|| | |||||| | |||| || |||| ||||| ||| ||||||||||||||||| |
Sbjct 72916 ATC-CACCTTCGGCCAGCGTCTCGTTGCCTTTGCTGCTGTCGAGGGTATCTTCTTCTCTG 72974
Query 65123 GGTCATTCTGC-GCTATTTATTGGTTGAAGAAGCGGGGTCTCATGCCAGGCCTATGCTTC 65181
| | || ||| |||| | ||| | ||||| ||||| ||||| || || ||||
Sbjct 72975 GTGCCTT-TGCTTCTATCTTCTGGCTACGTAAGCGTGGTCTGATGCCTGGTCTGACCTTC 73033
Query 65182 TCAAATGAACTTATTTCCCGAGATGAGGGTCTCCACCAGGAGTTTGCCGTGGAGCTCTTC 65241
|| || || ||||| ||||| ||||||||| | ||| || ||||| | | |||
Sbjct 73034 TCTAACGAGCTTATCTCCCGTGATGAGGGTTTGCACACAGATTTTGCTTGCTTGTTGTTC 73093
Query 65242 AAGACTTTGCGTAATAGACCCACTACCGAAACTATCCACGCCATCGTGAAAGAGGCGGTT 65301
| ||| || | || | | ||| || | || | | || || |||
Sbjct 73094 TCGCACTTGAACAACCGTCCTAGCAAGGAACTGGTCGAAAAGATTATCACTGATGCTGTT 73153
Query 65302 GAGATTGAGAAAGGGTTCATCTTGGACGCACTCCCATGTAATCTCATCGGTATGAACTCT 65361
| || ||||| | |||| | || || || || || ||| | || |||||| |
Sbjct 73154 GTCATCGAGAAGGAGTTCTTAACTGAGGCTCTTCCTTGCGGTCTGCTAGGCATGAACGCC 73213
Query 65362 GAGAAGATGTCCGAGTACATTGAGTATGTGTCGGATCGTCTCCTCAAACAAGTTGGGGT- 65420
|| |||| |||||||||||| || | || |||||||| |||| |
Sbjct 73214 GATCTGATGAAGCAGTACATTGAGTTCGTTGCTGACCGTCTCCT------GGTTGCCCTT 73267
Query 65421 -GCCAC--CCATTTGGAAC--GCGAAGAATCCATTTGACTTTATGGAAAACATTAGCCTT 65475
|| || | | || | | || | || || || ||||| ||||| |||||| ||
Sbjct 73268 GGCAACGACAAAGTGTACCGTGCTACAAACCCCTTCGACTTCATGGAGAACATTTCTCTG 73327
Query 65476 GATGGGAAGACCAACTTCTTTGAGAAGCGAGTTGGGGACTA 65516
| || ||||||||||||||||||||||| ||||| |||||
Sbjct 73328 GGAGGCAAGACCAACTTCTTTGAGAAGCGTGTTGGTGACTA 73368
>seq119
Length=69832
Score = 95.1 bits (104), Expect = 1e-14
Identities = 329/501 (66%), Gaps = 18/501 (4%)
Strand=Plus/Plus
Query 175191 TGATGTTGAGGGGATTGACGCCGCCAAAGATGAACTTGAAGAGATTGTGGATTTTCTCAA 175250
|||||| | || || |||| ||||| | ||| | ||| ||||| | || |||||
Sbjct 34927 TGATGTCGCCGGTATGGACGAAGCCAAGGTGGAAATCATGGAGTTTGTGCAGTTCCTCAA 34986
Query 175251 GCAACCCGAGAGATATTTTGGAAGTGGTGCCAAGATCCCCCGAGGCGCCCTTCTCGCGGG 175310
| | || |||| | | | | |||||| ||||| || || || ||| | || | ||
Sbjct 34987 GAAGCCTGAGAAGTTTGTGCGTCTTGGTGCTAAGATTCCTCGCGGTGCCATCCTGTCTGG 35046
Query 175311 TAAGCCAGGTACGGGAAAGACCCTCCTCGCCCGAGCCATCGCGGGTGAATCAAATGTCCC 175370
| || ||||| || ||||| || || ||| || | || || || || || ||
Sbjct 35047 TCCTCCCGGTACCGGTAAGACACTGCTGGCCAAGGCTACTGCCGGCGAGTCCGGAGTGCC 35106
Query 175371 ATTCATCCAGTGCTC-TGCCGCAAACTTTGTGGAGATGTTTGTTGGTGTGGGTGCCAAAA 175429
||| || |||| || | | ||||||||||||||||| ||||| ||| || |
Sbjct 35107 TTTCTTC-AGTGTGAGTGGTTCTGAGTTTGTGGAGATGTTTGTCGGTGTTGGTCCCTCAC 35165
Query 175430 GGGTTCGCGATCTCTTTGAAATCGCCCGCGAAAATCAACCATGTATTGTCTTCATTGATG 175489
| || || ||||| |||| | || ||| | || ||||| || ||||||||||| |
Sbjct 35166 GTGTACGTGATCTGTTTGCGACAGCTCGCAAGAACTCTCCATGCATCGTCTTCATTGACG 35225
Query 175490 AGATTGATGC----GGT-GGGCAAGCAACGCAGCGCTGGTGGTAT-GCCAGC--AAATGA 175541
| || ||||| ||| || | || ||| | | || | |||| | | || || ||
Sbjct 35226 AAATCGATGCCATTGGTCGGTCCAG-AAC-CGACTCTAATCGTATGGGCGGCGGTAACGA 35283
Query 175542 CGAGAGAGAACAAACAATTAATCAACTACTCACCGAGATGGATGGCTTTGACA---ATGA 175598
|||| | || || | || || | || |||||||||||||| || ||| |||
Sbjct 35284 CGAGCGCGAGTCGACGCTGAACCAGATCCTAACCGAGATGGATGGTTTCAACACCGCTGA 35343
Query 175599 GACTGGCATTGTGGTTATTGCGGCCACTAATCGCGTGGATATCCTTGATGACGCCCTCCT 175658
| | | || || || | || | || ||||||| ||||||||| ||| | || | |
Sbjct 35344 G-CAG--ATCGTTGTGCTGGCTGGTACCAATCGCGCGGATATCCTAGATAAGGCGTTGAT 35400
Query 175659 TCGCCCGGGTCGTTTTGATCG 175679
| || |||||||| |||||
Sbjct 35401 GAGACCTGGTCGTTTCGATCG 35421
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 596565416555680
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