Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Davidsoniella_20virescens_20[genbank_20GCA_5F001513805.1_202016-01-
13] 561 sequences; 33,427,969 total letters
Query= NC_025257.1
Length=102759
Score E
Sequences producing significant alignments: (Bits) Value
seq542 100 2e-16
>seq542
Length=123657
Score = 100 bits (110), Expect = 2e-16
Identities = 148/207 (71%), Gaps = 2/207 (1%)
Strand=Plus/Minus
Query 33522 ACCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGA 33581
|||||| | || ||| | ||||| || |||||| ||| ||||| ||||||||||| ||
Sbjct 106628 ACCACCACGCAGACGGAGGACCAAGTGGAGAGTGGACTCCTTTTGGATGTTGTAATCAGA 106569
Query 33582 GAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGG 33641
||| ||||| |||| || | ||| || ||||| ||||||| ||| ||||| || | ||
Sbjct 106568 GAGGGTGCGGCCGTCCTCGAGTTGCTTGCCGGCGAAAATCAGACGTTGCTGGTCCGGAGG 106509
Query 33642 CACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCA 33700
| || || ||||| ||| || | | |||| ||| | ||| ||| ||| || |
Sbjct 106508 GATGCCCTCCTTGTCCTGAATCTT-GGACTTGACATTGTCGATGGTATCGGATGACTCAA 106450
Query 33701 CGTCAACCGTGATCGTTTTACCTGTTA 33727
| || | ||||| || || || ||||
Sbjct 106449 CCTCGAGGGTGATAGTCTTGCCGGTTA 106423
Score = 100 bits (110), Expect = 2e-16
Identities = 161/229 (70%), Gaps = 2/229 (1%)
Strand=Plus/Minus
Query 33523 CCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAG 33582
||||| | || ||| | |||| |||||| || ||| ||||| |||||||| |||||
Sbjct 107373 CCACCACGCAGACGCAGAACCAGATGTAGGGTCGACTCCTTTTGAATGTTGTAGTCGGAT 107314
Query 33583 AGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGC 33642
|| ||||| |||| |||| || || || || || || | |||||| || || | ||
Sbjct 107313 AGGGTGCGACCGTCCTCCAGCTGCTTACCAGCGAAGATGAGACGCTGTTGGTCCGGGGGA 107254
Query 33643 ACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTCAC-GGTGTCGCTTGATTCCAC 33701
| ||| || ||||| || || |||| | | |||| ||||||| || || ||
Sbjct 107253 ATACCCTCCTTGTCCTGGATCTTGGACTTCA-CGTTGTCAATGGTGTCGGAAGACTCGAC 107195
Query 33702 GTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCATA 33750
|||| ||||| || || || || | || || |||||||||||||||
Sbjct 107194 CTCAAGAGTGATGGTCTTGCCAGTGAGAGTCTTGACAAAGATCTGCATA 107146
Score = 96.9 bits (106), Expect = 2e-15
Identities = 161/230 (70%), Gaps = 2/230 (1%)
Strand=Plus/Minus
Query 33522 ACCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGA 33581
|||||| | || ||| | |||| ||| ||||| ||| || || |||||||| || ||
Sbjct 107146 ACCACCACGCAGACGCAGAACCAGATGCAGAGTAGACTCCTTCTGGATGTTGTAGTCAGA 107087
Query 33582 GAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGG 33641
|| || ||| |||| |||| || || || || ||||| | ||||||||| || | ||
Sbjct 107086 CAGAGTACGTCCGTCCTCCAGCTGCTTACCAGCGAAAATGAGACGCTGCTGGTCCGGAGG 107027
Query 33642 CACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTCAC-GGTGTCGCTTGATTCCA 33700
| ||| || ||||| ||| || |||| | | |||| ||| || ||||| |
Sbjct 107026 AATACCCTCCTTGTCCTGAATCTTGGACTTCA-CGTTGTCAATGGTATCTGAAGATTCAA 106968
Query 33701 CGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCATA 33750
| || | ||||| || || || || | || || |||||||||||||||
Sbjct 106967 CCTCGAGAGTGATGGTCTTGCCAGTGAGAGTCTTGACAAAGATCTGCATA 106918
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 328701752589120
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |