Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Davidsoniella_20virescens_20[genbank_20GCA_5F001513805.1_202016-01- 13] 561 sequences; 33,427,969 total letters Query= NC_027925.1 Length=496396 Score E Sequences producing significant alignments: (Bits) Value seq7 114 4e-20 seq85 96.9 1e-14 >seq7 Length=77910 Score = 114 bits (126), Expect = 4e-20 Identities = 344/520 (66%), Gaps = 21/520 (4%) Strand=Plus/Plus Query 443337 TTTTGGACCATGGAGGAGATTGATCTCTCCAAGGACTTGGCCGATTGGAACGAACGACTA 443396 ||||||||| |||||||||||||| |||||||| | ||| |||||| | || Sbjct 72560 TTTTGGACCGCTGAGGAGATTGATCTATCCAAGGATCTCCACGACTGGAACAACCG---- 72615 Query 443397 TCTAGCCATGAACGCG-ATTTCTTCAAAT---GCATCTTGGCCTTCTTTGCACCGAGCGA 443452 |||| ||| | ||| | | | ||||| | |||| |||| |||||||| | || Sbjct 72616 TCTAACCAAGGACGAGCAATACTTCATCTCCCACATCCTGGCTTTCTTTGCTGCCTCTGA 72675 Query 443453 CGGTATCGTCGGTGAGAATCTGGTGACGCGTTTCTACGAAATGGTAGTGTACACCGAGGC 443512 ||||| ||| ||||||||||| |||||||| | ||| | | ||||||| Sbjct 72676 TGGTATTGTCAACGAGAATCTGGTTGAGCGTTTCTCTGGTGAGGTCCAGATCCCCGAGGC 72735 Query 443513 CCGCTACTTCTACGCGTTCCAAGCCGCAATGGAGAACATTCACGCCGAGGTCTACAGTCA 443572 |||| |||||||| ||||| | ||||||||||| ||| ||||| |||| | Sbjct 72736 TCGCTGCTTCTACGGTTTCCAGATCATGATGGAGAACATCCACTCCGAGACCTACTCCCT 72795 Query 443573 GTTGATCAAGACACTAATTCCGAACGAAGACGAACAGCGGTC-CATCTTCTCATCGTTCA 443631 |||||| | || || || || || | ||||| | | || ||| || Sbjct 72796 ATTGATCGATAC-TTACATC--AAGGAGCCTGCTCAGCGCACATACCTGTTCAACGCCAT 72852 Query 443632 TG--ACCACGCCAGGCATCACTGAAAAGACTCGCTGGGCAAAACAGTGGCT---CGAACG 443686 || |||| || ||||| ||| || ||||| ||||| | ||| Sbjct 72853 TGACACCATCCCCTGCATCCGCCGTAAGGCTGATTGGGCCCTTAAGTGGATTTGCGA--C 72910 Query 443687 AGAAAATCTCAGCTTCGTCGAGCGACTAGTCGCTTTTGCTGTGGTCGAAGGACTGTTGTT 443746 ||| |||| || ||||| | |||| || || || ||||||| ||||| || | || | Sbjct 72911 AGAGAATC-CACCTTCGGCCAGCGTCTCGTTGCCTTTGCTGCTGTCGAGGGTATCTT-CT 72968 Query 443747 TAGCGGCAGCTTTAGCCTCCATCTTCTGGTTGAAAAAGCGTGGACTTATGCACGGTCTGA 443806 | | | || || || || ||||||||| | |||||||| || |||| ||||||| Sbjct 72969 TCTCTGGTGCCTTTGCTTCTATCTTCTGGCTACGTAAGCGTGGTCTGATGCCTGGTCTGA 73028 Query 443807 CCTTTAGTAACGAACTGATCAGTCGGGACGAGGGTTTGCA 443846 |||| |||||| || ||| || || ||||||||||| Sbjct 73029 CCTTCTCTAACGAGCTTATCTCCCGTGATGAGGGTTTGCA 73068 >seq85 Length=153405 Score = 96.9 bits (106), Expect = 1e-14 Identities = 88/111 (79%), Gaps = 0/111 (0%) Strand=Plus/Plus Query 254971 CGGCATTATACCAATGATCCGTGTGTTCAACAACGTGGCTCGCTACGTCGATCAAGGGGG 255030 ||||||| | || ||| | ||||| ||||||||| || ||||||||||| || || || Sbjct 95672 CGGCATTGTTCCCATGCTGCGTGTCTTCAACAACACTGCCCGCTACGTCGACCAGGGTGG 95731 Query 255031 CGGCAAACGCCCAGGAGCGTTCACCATCTACCTGGAGCCGTGGCACGCCGA 255081 ||| ||||| || || || |||| ||||||||||||||||||||||| Sbjct 95732 TAACAAGCGCCCCGGTGCCTTTGCCATTTACCTGGAGCCGTGGCACGCCGA 95782 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1588324583338645