Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Davidsoniella_20virescens_20[genbank_20GCA_5F001513805.1_202016-01-
13] 561 sequences; 33,427,969 total letters
Query= NC_027925.1
Length=496396
Score E
Sequences producing significant alignments: (Bits) Value
seq7 114 4e-20
seq85 96.9 1e-14
>seq7
Length=77910
Score = 114 bits (126), Expect = 4e-20
Identities = 344/520 (66%), Gaps = 21/520 (4%)
Strand=Plus/Plus
Query 443337 TTTTGGACCATGGAGGAGATTGATCTCTCCAAGGACTTGGCCGATTGGAACGAACGACTA 443396
||||||||| |||||||||||||| |||||||| | ||| |||||| | ||
Sbjct 72560 TTTTGGACCGCTGAGGAGATTGATCTATCCAAGGATCTCCACGACTGGAACAACCG---- 72615
Query 443397 TCTAGCCATGAACGCG-ATTTCTTCAAAT---GCATCTTGGCCTTCTTTGCACCGAGCGA 443452
|||| ||| | ||| | | | ||||| | |||| |||| |||||||| | ||
Sbjct 72616 TCTAACCAAGGACGAGCAATACTTCATCTCCCACATCCTGGCTTTCTTTGCTGCCTCTGA 72675
Query 443453 CGGTATCGTCGGTGAGAATCTGGTGACGCGTTTCTACGAAATGGTAGTGTACACCGAGGC 443512
||||| ||| ||||||||||| |||||||| | ||| | | |||||||
Sbjct 72676 TGGTATTGTCAACGAGAATCTGGTTGAGCGTTTCTCTGGTGAGGTCCAGATCCCCGAGGC 72735
Query 443513 CCGCTACTTCTACGCGTTCCAAGCCGCAATGGAGAACATTCACGCCGAGGTCTACAGTCA 443572
|||| |||||||| ||||| | ||||||||||| ||| ||||| |||| |
Sbjct 72736 TCGCTGCTTCTACGGTTTCCAGATCATGATGGAGAACATCCACTCCGAGACCTACTCCCT 72795
Query 443573 GTTGATCAAGACACTAATTCCGAACGAAGACGAACAGCGGTC-CATCTTCTCATCGTTCA 443631
|||||| | || || || || || | ||||| | | || ||| ||
Sbjct 72796 ATTGATCGATAC-TTACATC--AAGGAGCCTGCTCAGCGCACATACCTGTTCAACGCCAT 72852
Query 443632 TG--ACCACGCCAGGCATCACTGAAAAGACTCGCTGGGCAAAACAGTGGCT---CGAACG 443686
|| |||| || ||||| ||| || ||||| ||||| | |||
Sbjct 72853 TGACACCATCCCCTGCATCCGCCGTAAGGCTGATTGGGCCCTTAAGTGGATTTGCGA--C 72910
Query 443687 AGAAAATCTCAGCTTCGTCGAGCGACTAGTCGCTTTTGCTGTGGTCGAAGGACTGTTGTT 443746
||| |||| || ||||| | |||| || || || ||||||| ||||| || | || |
Sbjct 72911 AGAGAATC-CACCTTCGGCCAGCGTCTCGTTGCCTTTGCTGCTGTCGAGGGTATCTT-CT 72968
Query 443747 TAGCGGCAGCTTTAGCCTCCATCTTCTGGTTGAAAAAGCGTGGACTTATGCACGGTCTGA 443806
| | | || || || || ||||||||| | |||||||| || |||| |||||||
Sbjct 72969 TCTCTGGTGCCTTTGCTTCTATCTTCTGGCTACGTAAGCGTGGTCTGATGCCTGGTCTGA 73028
Query 443807 CCTTTAGTAACGAACTGATCAGTCGGGACGAGGGTTTGCA 443846
|||| |||||| || ||| || || |||||||||||
Sbjct 73029 CCTTCTCTAACGAGCTTATCTCCCGTGATGAGGGTTTGCA 73068
>seq85
Length=153405
Score = 96.9 bits (106), Expect = 1e-14
Identities = 88/111 (79%), Gaps = 0/111 (0%)
Strand=Plus/Plus
Query 254971 CGGCATTATACCAATGATCCGTGTGTTCAACAACGTGGCTCGCTACGTCGATCAAGGGGG 255030
||||||| | || ||| | ||||| ||||||||| || ||||||||||| || || ||
Sbjct 95672 CGGCATTGTTCCCATGCTGCGTGTCTTCAACAACACTGCCCGCTACGTCGACCAGGGTGG 95731
Query 255031 CGGCAAACGCCCAGGAGCGTTCACCATCTACCTGGAGCCGTGGCACGCCGA 255081
||| ||||| || || || |||| |||||||||||||||||||||||
Sbjct 95732 TAACAAGCGCCCCGGTGCCTTTGCCATTTACCTGGAGCCGTGGCACGCCGA 95782
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1588324583338645
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |