Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Davidsoniella_20virescens_20[genbank_20GCA_5F001513805.1_202016-01-
13] 561 sequences; 33,427,969 total letters
Query= NC_028091.1
Length=196300
Score E
Sequences producing significant alignments: (Bits) Value
seq85 147 3e-30
seq7 102 1e-16
seq119 91.5 2e-13
>seq85
Length=153405
Score = 147 bits (162), Expect = 3e-30
Identities = 887/1404 (63%), Gaps = 49/1404 (3%)
Strand=Plus/Minus
Query 110706 GGTAGATGTTTGTTGTGTATGGTTCAAAGCATTCATTATTACCCAAGATTTGTGCGGTGG 110765
|||||||||| | ||||| || || ||||| || || || || | ||| || | ||| |
Sbjct 96741 GGTAGATGTTCGAGGTGTAAGGCTCGAAGCACTCGTTGTTGCCTAGGATCTGAGAGGTCG 96682
Query 110766 AGGCTGTTGGCATTGGTGCCATCAAAAGACTGTTACGAAGACCCTTCTCCTTGATGCGTT 110825
|||| |||||||| || |||| | || ||| || | || | || |||||| |||
Sbjct 96681 AGGCAGTTGGCATAGGAGCCAGGAGTAGCGAGTTGCGCACGCCGTGCTGCTTGATCTGTT 96622
Query 110826 CCTTGAGAACATCCCAGTCGTA--GTTGAGCTTGGTTTCACCTTCCCACATGTCAAACTG 110883
||||||| ||||||| | | | | || || | || |||| ||||||| |||||
Sbjct 96621 CCTTGAGCGAGGCCCAGTCCCACAGGTCA-CTAGGGGTAACGTTCC-ACATGTCGAACTG 96564
Query 110884 AAGCACCCCTTGGGACGCGGGAGAACCCTCAAAGGTTTCATAGGAACCTTGGGCTTCAGC 110943
|| | || || || | || ||||||||| |||| || | ||| | || || |||
Sbjct 96563 CAGGATACCCTGAGATACAGGCGAACCCTCATAGGTGGAGTAAGTACCCTCGGTTTGAGC 96504
Query 110944 CAATTCACAGCTCGCCTCCAGGGATGCGTGATACATGGTTTCAAAGATACGAGCATTCAT 111003
| || || || ||||| ||||| || ||||| || ||||| | ||||
Sbjct 96503 AATCTCGCACGAGGCAGTCAGGGCAGCGTGGTAGATGGTCTCGAAGATCTGCTTGTTCAG 96444
Query 111004 CTCCTTGGCTTCATCTGAATCAAA-----TGCGTAGCGGCACAAAATAAATACATCCGCG 111058
||| || | || || || ||||||| | | ||| |||| ||
Sbjct 96443 AGTGCGGGCCTCGGCAGACTCGAAAGGCATGCGTAGGGCTAGGAAAG-----CATCGGCT 96389
Query 111059 AGACCTTGAACACCCAAACCAATAGGTCTGTGTCGCATATTAGACTTTCGCGCAGTCTCA 111118
||||| || ||||| | |||||| || | || ||||| || || | | | || ||||
Sbjct 96388 AGACCCTGGACACCAACACCAATGGGGCGATGACGCATGTTG--CTGTTGTG-AGCCTCA 96332
Query 111119 ---ACGGGATAAAAATTTCTGTCAATGACTCGGTTTAGATTTTTGGTAACAATCTTTGTG 111175
|| || || || || || | || || || || || | ||| |||
Sbjct 96331 GGCACAGGGTAGTGGTTGACATCGATAATGCGATTCAGGTTACGCACGACCACCTTGGTG 96272
Query 111176 ATTTCATGAAGTTTTTCATAATCAAAAGTGCGAGTCTCTTCATTGACATACTTTGGAAGG 111235
|| || || || || | |||| | | | | | | |||| | ||| |||
Sbjct 96271 ATCTCGTGCAGCTTCTGGAAATCGTACTCTCCTTTGTTGTAGTCGACAAAGGATGGTAGG 96212
Query 111236 GCGATTGATGCCAAATTGCAAACAGCCGTCTCATCCTTATCTGTGTACTCTAAAATTTCT 111295
|| | || || | ||||| || || |||||| | | |||||| | |||||
Sbjct 96211 GCTAGCGAGGCTAGGTTGCATACGGCAACCTCATCGGGAGCGCAGTACTCGATGATTTCA 96152
Query 111296 GTACATAAGTTGGAACTCTTAATCGTCCCCAAATTCTTTTGGTTACTCTTCTTGTTGCAC 111355
|| |||| ||||| || || || || | || || ||||| ||||||||||||||
Sbjct 96151 GTGCATAGATTGGAGCTGCGGATAGTGCCTAGGTTTTTCTGGTTGCTCTTCTTGTTGCAG 96092
Query 111356 GCATCCTTGTAGAGCATGTAGGGCGTCCCCGTCTCCGTCTGTGATTTGAGAATAGCCTTC 111415
|| |||||||| |||||| | || | || ||||| ||||| | | |||||| || | |
Sbjct 96091 GCGTCCTTGTACAGCATGAATGGGTTGCCGGTCTCGGTCTGGGCCTCGAGAATGGCGTAC 96032
Query 111416 CA-AACATCGGCGGCTGGTACAATGG--CGTTGGCC-CGTCCCTCCGCCTCGTACTTTGT 111471
|| | | || | | || | |||| | |||| || || || |||||||||
Sbjct 96031 CACAGCTTCTGGGCCTTG----ATGGTAAGACGGCCACGGCCTTCACTCTCGTACTTCTC 95976
Query 111472 GTAGAGGGCTTCAAACTCCTCACCCACCGCGTCGGAGAGACCTGGTGCCTTGTCTGGACA 111531
|| || || || |||||||| || || | || || || || | || ||
Sbjct 95975 ATACAGAGCCTCGAACTCCTCGCCGTAGCAATCAGCTAGTCCAGGGCACTCATTAGGGCA 95916
Query 111532 GAAAAGAGACCA-TTGACCACCTTCCTCAACCCGCTTCATGAAAAGGTCTGGAATCCACA 111590
| || | ||| ||| | ||| || || ||||||||||| || || ||||||||||
Sbjct 95915 CATGAGTGTCCAGTTGGCGTTCTT-TTCGACACGCTTCATGAACAGATCGGGAATCCACA 95857
Query 111591 GGGATGAAAAGAGATCTCTACACCGAGCCTCTTCGTCACCTTGGTTGAGTCGTAACTCAA 111650
| | | || ||||| | ||| ||| || | || ||||| || | ||||
Sbjct 95856 GTGCTAGGAACAGATCACGGGCACGAATCTCCTCCTTGCCGTGGTTCTTGCGCAGATCAA 95797
Query 111651 GGAACTCCATGATATCCGCGTGCCATGGCTCAAGATAGACTGCGATAGATCC------CT 111704
||||||| | | ||| |||||||| ||||| || || | || | | || ||
Sbjct 95796 GGAACTCGAACACATCGGCGTGCCACGGCTCCAGGTAAATGGCAAAGGCACCGGGGCGCT 95737
Query 111705 TTCGACGCCCAGCTTGATTTACATAGCGCGCTGTGGCGTTAAATACGCGAAGCATTGGAA 111764
| | ||| | || | || ||||| || ||| ||| || || || ||||| ||||
Sbjct 95736 TGTTA---CCACCCTGGTCGACGTAGCGGGCAGTGTTGTTGAAGACACGCAGCATGGGAA 95680
Query 111765 TAATACCATCTGATTGACCATTTGTCCCCCGAA--TACGAGATTTATTGGCTCTCACATC 111822
||| || | || || || || || || |||||| | |||| | | |
Sbjct 95679 CAATGCCGTTAGACGTGCCGTTGGTGCCAGCAATGTACGAG--CCAGTGGCACGGATACG 95622
Query 111823 ATGGATGTGCATCCCAATACCCCCAGCCCACTTTGAGATTTGCGCACACTCCGTAAGAGT 111882
|||| || || || ||||| || ||| ||| ||||| ||||| | | || ||
Sbjct 95621 GTGGACGTTCAGACCGATACCGCCGGCCATCTTGGAGATCATAGCACAAGTCTTCAGCGT 95562
Query 111883 TCCATAGATACCGTTGATTGAGTCCTCCTTGTTGGCGATAAGGAAGCAACTGGACATCTG 111942
| |||||||| | || ||| ||||| | | | |||||||| || | |||
Sbjct 95561 ATCGTAGATACCATCAATGCTGTCGTCCTTCATATCAACTAGGAAGCACGACGATAGCTG 95502
Query 111943 CGGTCT-TGGTGTACCAGCATTGAAGAGGGTTGGTGTTGCGTGAATGAACATACCTTG-- 111999
|| || ||||| ||||| ||||| || || || | ||||| ||| | | ||||
Sbjct 95501 -GGCCTGCGGTGTGCCAGCGTTGAATAGCGTGGGCGAGGCGTGTGTGA--AGAACTTGCT 95445
Query 112000 GGACATCTTGTCGTATGTCTCCAAGACAGAATCAATGTCTTCCCCGTGGATGCCGATTGC 112059
||||| | || ||| ||||| | ||| |||| | || || |||||| | ||
Sbjct 95444 TGACATGTAGTTGTAAGTCTCGAGCACACGGTCAACGCGGTCACCCCAGATGCCAACGGC 95385
Query 112060 GACCCGCATGAACATGTACTGTGG 112083
|| ||||||| ||||| ||| ||
Sbjct 95384 CACACGCATGATCATGTGCTGCGG 95361
>seq7
Length=77910
Score = 102 bits (112), Expect = 1e-16
Identities = 347/527 (66%), Gaps = 19/527 (4%)
Strand=Plus/Minus
Query 122659 GCAAACTCCTGGTGGAGACCCTCATCTCGGGAAATAAGTTCATTTGAGAAGCATAGACCT 122718
||||| || ||| | ||||||||| ||||| ||||| || || |||||| |||||
Sbjct 73080 GCAAAATCTGTGTGCAAACCCTCATCACGGGAGATAAGCTCGTTAGAGAAGGTCAGACCA 73021
Query 122719 GGCATGAGACCCCGCTTCTTCAACCAATAAATAGC-GCAGAATGACCCGGAGAAGAAGAT 122777
||||| ||||| ||||| | ||| | |||| ||| || | || |||||||||||
Sbjct 73020 GGCATCAGACCACGCTTACGTAGCCAGAAGATAGAAGCA-AAGGCACCAGAGAAGAAGAT 72962
Query 122778 ACCCTCCACACACGCAAACGCAAAAAGGCGTTCGGCGAAGGAGCGAGACTTTGCATCAAA 122837
|||||| ||| ||||| |||| || || | | |||||| | || || || ||||
Sbjct 72961 ACCCTCGACAGCAGCAAAGGCAACGAGACGCTGGCCGAAGGTG-GATTCTCTGTCGCAAA 72903
Query 122838 -CCATTTCATTGCCCATTTCGCCTTCTTCTCAATACATGGTACAGTTTGGATGGCTT--- 122893
||| || | ||||| | ||||| || || || | || | ||||| |
Sbjct 72902 TCCACTTAAGGGCCCAATCAGCCTTACGGCGGATGCAGGGGATGGTGTCAATGGCGTTGA 72843
Query 122894 -CAAATAACTGCTTCTTTTCAGATCCATCCTTAATGTATTTGTCAATCAATTTTGAATAT 122952
|| || ||| || ||| ||||| ||||| | || |||||| || ||
Sbjct 72842 ACAGGTATGTGC-GCTGAGCAG---GCTCCTTGATGTAAGTATCGATCAATAGGGAGTAG 72787
Query 122953 GTTTCGCCATGAACCAT-TTCATTATGGCATTGATATGCGTAGAATGAGCGCGCTTCGCT 123011
|| ||| || | | | ||| ||| | || | ||||||| |||| || |||
Sbjct 72786 GTCTCGGAGTGGATGTTCTCCATCATGATCTGGA-AACCGTAGAAGCAGCGAGCCTCGGG 72728
Query 123012 TATCTGAACCTCATCCGCAAAATTGTTATTGATATTCTCAAAAACAATTCCATCGGACCC 123071
||||| |||||| | | ||| | | | |||||| ||||| ||||| || |
Sbjct 72727 GATCTGGACCTCACCAGAGAAACGCTCAACCAGATTCTCGTTGACAATACCATCAGAGGC 72668
Query 123072 AGCAAAGAATGCCAGGATGT---ACTTTATGAATTTCTTTTCATT-TTCATTCAGGGTCT 123127
||||||||| |||||||||| | | | | ||| || || || | | | || | |
Sbjct 72667 AGCAAAGAAAGCCAGGATGTGGGAGATGAAGTATTGCTCGTCCTTGGTTAGAC-GGTTGT 72609
Query 123128 TCCAGTCGTCAAGATCTTTGGACAAATCAACTTCTTCCGCAGTCCAA 123174
||||||||| ||||| ||||| | ||||| || || || ||||||
Sbjct 72608 TCCAGTCGTGGAGATCCTTGGATAGATCAATCTCCTCAGCGGTCCAA 72562
>seq119
Length=69832
Score = 91.5 bits (100), Expect = 2e-13
Identities = 328/501 (65%), Gaps = 18/501 (4%)
Strand=Plus/Minus
Query 11450 CGATCAAAACGACCCGGGCGAAGGAGGGCGTCATCAAGGATATCCACGCGATTAGTGGCC 11509
||||| |||||||| || | | | || | ||| ||||||||| ||||||| || |
Sbjct 35421 CGATCGAAACGACCAGGTCTCATCAACGCCTTATCTAGGATATCCGCGCGATTGGTACCA 35362
Query 11510 GCAATAACCACAATGCCAGTCTCAT---TGTCAAAGCCATCCATCTCGGTGAGTAATTGA 11566
|| | || || || | | |||| ||| || |||||||||||||| || | ||
Sbjct 35361 GCCAGCACAACGAT--CTG-CTCAGCGGTGTTGAAACCATCCATCTCGGTTAGGATCTGG 35305
Query 11567 TTAATTGTTTGTTCTCTCTCATCATTT--GCTGGC-ATACCACCAGCACTGCGTTGCTTG 11623
|| | || || | ||| || || || | | |||| | || | | ||| || |
Sbjct 35304 TTCAGCGTCGACTCGCGCTCGTCGTTACCGCCGCCCATACGATTAG-AGTCGGTT-CTGG 35247
Query 11624 CCC-ACC----GCATCAATCTCATCAATGAAGACAATACATGGTTGATTTTCGCGGGCGA 11678
|| ||| ||||| || || ||||||||||| || ||||| || | ||| ||
Sbjct 35246 ACCGACCAATGGCATCGATTTCGTCAATGAAGACGATGCATGGAGAGTTCTTGCGAGCTG 35187
Query 11679 TTTCAAAGAGATCGCGAACCCTTTTGGCACCCACACCAACAAACATCTCCACAAAGTTTG 11738
| |||| ||||| || || | | || ||| ||||| ||||||||||||||||| | |
Sbjct 35186 TCGCAAACAGATCACGTACACGTGAGGGACCAACACCGACAAACATCTCCACAAACTCAG 35127
Query 11739 CGGCA-GAGCACTGGATGAATGGGACATTTGATTCACCCGCGATGGCTCGGGCGAGGAGG 11797
|| |||| || ||| || || || || || || | || ||| || ||
Sbjct 35126 AACCACTCACACT-GAAGAAAGGCACTCCGGACTCGCCGGCAGTAGCCTTGGCCAGCAGT 35068
Query 11798 GTCTTTCCCGTACCTGGCTTACCCGCGAGAAGGGCGCCTCGGGGGATCTTGGCACCACTT 11857
||||| || ||||| || ||| | || | ||| || || || ||||| ||||||
Sbjct 35067 GTCTTACCGGTACCGGGAGGACCAGACAGGATGGCACCGCGAGGAATCTTAGCACCAAGA 35008
Query 11858 CCAAAATATCTCTCGGGTTGCTTGAGAAAATCCACAATCTCTTCAAGTTCATCTTTGGCC 11917
| | | | |||| || | |||||| || | ||||| ||| | ||| | |||||
Sbjct 35007 CGCACAAACTTCTCAGGCTTCTTGAGGAACTGCACAAACTCCATGATTTCCACCTTGGCT 34948
Query 11918 GCGTCAATCCCCTCAACATCA 11938
|||| || || | ||||||
Sbjct 34947 TCGTCCATACCGGCGACATCA 34927
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 628027595925600
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