Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Davidsoniella_20virescens_20[genbank_20GCA_5F001513805.1_202016-01-
13] 561 sequences; 33,427,969 total letters
Query= NC_028092.1
Length=193301
Score E
Sequences producing significant alignments: (Bits) Value
seq7 156 5e-33
>seq7
Length=77910
Score = 156 bits (172), Expect = 5e-33
Identities = 536/821 (65%), Gaps = 31/821 (4%)
Strand=Plus/Minus
Query 129728 TAGTCCCCAACCCGCTTCTCGAAGAAGTTTGTCTTCCCGTCCAAGCTGATATTCTCCATA 129787
||||| ||||| |||||||| |||||||| ||||| || ||| || ||||||||
Sbjct 73368 TAGTCACCAACACGCTTCTCAAAGAAGTTGGTCTTGCCTCCCAGAGAAATGTTCTCCATG 73309
Query 129788 AAATCAAATGGGTTCTTTGA--GTTCCAAATTGCTG--GC--ACTCCAATCTGTTTGAGG 129841
|| || || ||||| | | | | || ||| | || | ||| | |||
Sbjct 73308 AAGTCGAAGGGGTTTGTAGCACGGTACACTTTGTCGTTGCCAAGGGCAACC------AGG 73255
Query 129842 AGACGATCCGAGACGTACTCAATGTACTCAGACATCTTCTCGGAGTTCATACCGATGAGG 129901
||||| || | ||| |||||||||||| |||| |||| |||||| || | ||
Sbjct 73254 AGACGGTCAGCAACGAACTCAATGTACTGCTTCATCAGATCGGCGTTCATGCCTAGCAGA 73195
Query 129902 TTACATGGGAGCGCGTCCAAGATGAACCCCTTCTCAATGTCCACAGCTTCCCGCACGATG 129961
|| || || || || | |||| ||||||| ||| | ||||| || | ||
Sbjct 73194 CCGCAAGGAAGAGCCTCAGTTAAGAACTCCTTCTCGATGACAACAGCATCAGTGATAATC 73135
Query 129962 GCGT-GAATGGTCTCCGTGCCAGGTCTATTGCGCAAAGTCTTGAAGAGTTCCACG---GC 130017
| || || ||| ||| ||| | ||| ||| | ||| | || | ||
Sbjct 73134 TTTTCGACCAGT-TCCTTGCTAGGACGGTTGTTCAAGTGCGAGAACAA---CAAGCAAGC 73079
Query 130018 AAACTCCTGGTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGACCTGG 130077
||| || ||| | |||||| ||||||||||| || || || |||||| |||||| ||
Sbjct 73078 AAAATCTGTGTGCAAACCCTCATCACGGGAGATAAGCTCGTTAGAGAAGGTCAGACCAGG 73019
Query 130078 CATGAGACCCCGCTTCTTCAACCAGAAAATCGCACAAAATGAGCCAGAGAAGAAGATCCC 130137
||| ||||| ||||| | |||||| || | | ||| | |||||||||||||| ||
Sbjct 73018 CATCAGACCACGCTTACGTAGCCAGAAGATAGAAGCAAAGGCACCAGAGAAGAAGATACC 72959
Query 130138 CTCCACACACGCGAACGCAAAGAGACGCTCAGCAAAGGAGCGGGACTTTGTATCAAA-CC 130196
||| ||| || || |||| |||||||| | |||| | | || ||| |||| ||
Sbjct 72958 CTCGACAGCAGCAAAGGCAACGAGACGCTGGCCGAAGGTG-GATTCTCTGTCGCAAATCC 72900
Query 130197 ACTTCATCGCCCACTGCGCCTTTTTCTCGATACACGGGACGGTCTGGATCGCTTCAAAGA 130256
|||| | ||||| | ||||| ||| || |||| ||| | || || | || |
Sbjct 72899 ACTTAAGGGCCCAATCAGCCTTACGGCGGATGCAGGGGATGGTGTCAATGGCGTTGAACA 72840
Query 130257 GTTCCTTCTTTTCTGA--TGGATCTTTGATGTACTTATCTATGAGTTTTGAATATGTTTC 130314
| | | | |||| || || |||||||| |||| || | | || || || ||
Sbjct 72839 GGT--ATGTGCGCTGAGCAGGCTCCTTGATGTAAGTATCGATCAATAGGGAGTAGGTCTC 72782
Query 130315 GCCATGGACCAT-TTCATTATGGCACTGATACGCGTAGAAAGAGCGCGCTTCGCTTATCT 130373
| |||| | | ||| || | ||| | ||||||| |||| || ||| ||||
Sbjct 72781 GGAGTGGATGTTCTCCATCAT-GATCTGGAAACCGTAGAAGCAGCGAGCCTCGGGGATCT 72723
Query 130374 GTACCTCATCTGCAAAATTGTTATTGATATTCTCAAAAACAATTCCATCGGACCCAGCAA 130433
| |||||| | | ||| | | | |||||| ||||| ||||| || ||||||
Sbjct 72722 GGACCTCACCAGAGAAACGCTCAACCAGATTCTCGTTGACAATACCATCAGAGGCAGCAA 72663
Query 130434 AAAACGCCAGGATATACTTTATGAATTTCTGTTCATTCTCGTTCA---GGGTCTTCCAGT 130490
| || |||||||| | ||||| | || || | || | | | || | |||||||
Sbjct 72662 AGAAAGCCAGGATGTGGGAGATGAAGTATTGCTCGTCCTTGGTTAGACGGTTGTTCCAGT 72603
Query 130491 CGTCAAGATCCTTCGAGAGATCTACCTCCTCCGCAGTCCAA 130531
||| |||||||| || ||||| | |||||| || ||||||
Sbjct 72602 CGTGGAGATCCTTGGATAGATCAATCTCCTCAGCGGTCCAA 72562
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 618430863223160
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |