Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Davidsoniella_20virescens_20[genbank_20GCA_5F001513805.1_202016-01- 13] 561 sequences; 33,427,969 total letters Query= NC_028092.1 Length=193301 Score E Sequences producing significant alignments: (Bits) Value seq7 156 5e-33 >seq7 Length=77910 Score = 156 bits (172), Expect = 5e-33 Identities = 536/821 (65%), Gaps = 31/821 (4%) Strand=Plus/Minus Query 129728 TAGTCCCCAACCCGCTTCTCGAAGAAGTTTGTCTTCCCGTCCAAGCTGATATTCTCCATA 129787 ||||| ||||| |||||||| |||||||| ||||| || ||| || |||||||| Sbjct 73368 TAGTCACCAACACGCTTCTCAAAGAAGTTGGTCTTGCCTCCCAGAGAAATGTTCTCCATG 73309 Query 129788 AAATCAAATGGGTTCTTTGA--GTTCCAAATTGCTG--GC--ACTCCAATCTGTTTGAGG 129841 || || || ||||| | | | | || ||| | || | ||| | ||| Sbjct 73308 AAGTCGAAGGGGTTTGTAGCACGGTACACTTTGTCGTTGCCAAGGGCAACC------AGG 73255 Query 129842 AGACGATCCGAGACGTACTCAATGTACTCAGACATCTTCTCGGAGTTCATACCGATGAGG 129901 ||||| || | ||| |||||||||||| |||| |||| |||||| || | || Sbjct 73254 AGACGGTCAGCAACGAACTCAATGTACTGCTTCATCAGATCGGCGTTCATGCCTAGCAGA 73195 Query 129902 TTACATGGGAGCGCGTCCAAGATGAACCCCTTCTCAATGTCCACAGCTTCCCGCACGATG 129961 || || || || || | |||| ||||||| ||| | ||||| || | || Sbjct 73194 CCGCAAGGAAGAGCCTCAGTTAAGAACTCCTTCTCGATGACAACAGCATCAGTGATAATC 73135 Query 129962 GCGT-GAATGGTCTCCGTGCCAGGTCTATTGCGCAAAGTCTTGAAGAGTTCCACG---GC 130017 | || || ||| ||| ||| | ||| ||| | ||| | || | || Sbjct 73134 TTTTCGACCAGT-TCCTTGCTAGGACGGTTGTTCAAGTGCGAGAACAA---CAAGCAAGC 73079 Query 130018 AAACTCCTGGTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGACCTGG 130077 ||| || ||| | |||||| ||||||||||| || || || |||||| |||||| || Sbjct 73078 AAAATCTGTGTGCAAACCCTCATCACGGGAGATAAGCTCGTTAGAGAAGGTCAGACCAGG 73019 Query 130078 CATGAGACCCCGCTTCTTCAACCAGAAAATCGCACAAAATGAGCCAGAGAAGAAGATCCC 130137 ||| ||||| ||||| | |||||| || | | ||| | |||||||||||||| || Sbjct 73018 CATCAGACCACGCTTACGTAGCCAGAAGATAGAAGCAAAGGCACCAGAGAAGAAGATACC 72959 Query 130138 CTCCACACACGCGAACGCAAAGAGACGCTCAGCAAAGGAGCGGGACTTTGTATCAAA-CC 130196 ||| ||| || || |||| |||||||| | |||| | | || ||| |||| || Sbjct 72958 CTCGACAGCAGCAAAGGCAACGAGACGCTGGCCGAAGGTG-GATTCTCTGTCGCAAATCC 72900 Query 130197 ACTTCATCGCCCACTGCGCCTTTTTCTCGATACACGGGACGGTCTGGATCGCTTCAAAGA 130256 |||| | ||||| | ||||| ||| || |||| ||| | || || | || | Sbjct 72899 ACTTAAGGGCCCAATCAGCCTTACGGCGGATGCAGGGGATGGTGTCAATGGCGTTGAACA 72840 Query 130257 GTTCCTTCTTTTCTGA--TGGATCTTTGATGTACTTATCTATGAGTTTTGAATATGTTTC 130314 | | | | |||| || || |||||||| |||| || | | || || || || Sbjct 72839 GGT--ATGTGCGCTGAGCAGGCTCCTTGATGTAAGTATCGATCAATAGGGAGTAGGTCTC 72782 Query 130315 GCCATGGACCAT-TTCATTATGGCACTGATACGCGTAGAAAGAGCGCGCTTCGCTTATCT 130373 | |||| | | ||| || | ||| | ||||||| |||| || ||| |||| Sbjct 72781 GGAGTGGATGTTCTCCATCAT-GATCTGGAAACCGTAGAAGCAGCGAGCCTCGGGGATCT 72723 Query 130374 GTACCTCATCTGCAAAATTGTTATTGATATTCTCAAAAACAATTCCATCGGACCCAGCAA 130433 | |||||| | | ||| | | | |||||| ||||| ||||| || |||||| Sbjct 72722 GGACCTCACCAGAGAAACGCTCAACCAGATTCTCGTTGACAATACCATCAGAGGCAGCAA 72663 Query 130434 AAAACGCCAGGATATACTTTATGAATTTCTGTTCATTCTCGTTCA---GGGTCTTCCAGT 130490 | || |||||||| | ||||| | || || | || | | | || | ||||||| Sbjct 72662 AGAAAGCCAGGATGTGGGAGATGAAGTATTGCTCGTCCTTGGTTAGACGGTTGTTCCAGT 72603 Query 130491 CGTCAAGATCCTTCGAGAGATCTACCTCCTCCGCAGTCCAA 130531 ||| |||||||| || ||||| | |||||| || |||||| Sbjct 72602 CGTGGAGATCCTTGGATAGATCAATCTCCTCAGCGGTCCAA 72562 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 618430863223160