Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Davidsoniella_20virescens_20[genbank_20GCA_5F001513805.1_202016-01-
13] 561 sequences; 33,427,969 total letters
Query= NC_028491.1
Length=98392
Score E
Sequences producing significant alignments: (Bits) Value
seq542 100 2e-16
>seq542
Length=123657
Score = 100 bits (110), Expect = 2e-16
Identities = 97/125 (78%), Gaps = 0/125 (0%)
Strand=Plus/Minus
Query 34489 AGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGC 34548
||||| | ||||| ||||||||| ||||||||| ||||| ||||| || || || ||
Sbjct 106618 AGACGGAGGACCAAGTGGAGAGTGGACTCCTTTTGGATGTTGTAATCAGAGAGGGTGCGG 106559
Query 34549 TCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCC 34608
|||| || ||||| || ||||| || || | ||| || |||||||| || | ||||||
Sbjct 106558 CCGTCCTCGAGTTGCTTGCCGGCGAAAATCAGACGTTGCTGGTCCGGAGGGATGCCCTCC 106499
Query 34609 TTGTC 34613
|||||
Sbjct 106498 TTGTC 106494
Score = 100 bits (110), Expect = 2e-16
Identities = 155/219 (71%), Gaps = 2/219 (1%)
Strand=Plus/Minus
Query 34489 AGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGC 34548
||||||| |||| ||| || || ||||||||||||||| || || || || || ||
Sbjct 107364 AGACGCAGAACCAGATGTAGGGTCGACTCCTTTTGAATGTTGTAGTCGGATAGGGTGCGA 107305
Query 34549 TCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCC 34608
|||| || || || ||||| || || || | ||||||||||||||| || | ||||||
Sbjct 107304 CCGTCCTCCAGCTGCTTACCAGCGAAGATGAGACGCTGTTGGTCCGGGGGAATACCCTCC 107245
Query 34609 TTGTCTGTGATCTTTTGTTTTAACGAT-AAAATTGTGTCTTCGCTCTCCACTTCCACGGT 34667
||||| |||| || | || ||| | ||| ||||| ||| || || | ||
Sbjct 107244 TTGTCCTGGATC-TTGGACTTCACGTTGTCAATGGTGTCGGAAGACTCGACCTCAAGAGT 107186
Query 34668 TATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCAT 34706
|| || || || || | || || ||||| ||||||||
Sbjct 107185 GATGGTCTTGCCAGTGAGAGTCTTGACAAAGATCTGCAT 107147
Score = 86.0 bits (94), Expect = 4e-12
Identities = 94/125 (75%), Gaps = 0/125 (0%)
Strand=Plus/Minus
Query 34489 AGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGC 34548
||||||| |||| ||| ||||| |||||| || ||||| || || || || || ||
Sbjct 107136 AGACGCAGAACCAGATGCAGAGTAGACTCCTTCTGGATGTTGTAGTCAGACAGAGTACGT 107077
Query 34549 TCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCC 34608
|||| || || || ||||| || || || | |||||| |||||||| || | ||||||
Sbjct 107076 CCGTCCTCCAGCTGCTTACCAGCGAAAATGAGACGCTGCTGGTCCGGAGGAATACCCTCC 107017
Query 34609 TTGTC 34613
|||||
Sbjct 107016 TTGTC 107012
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 314727448134713
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |