Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Davidsoniella_20virescens_20[genbank_20GCA_5F001513805.1_202016-01-
13] 561 sequences; 33,427,969 total letters
Query= NC_028636.1
Length=135952
Score E
Sequences producing significant alignments: (Bits) Value
seq542 163 2e-35
>seq542
Length=123657
Score = 163 bits (180), Expect = 2e-35
Identities = 173/228 (76%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047
|||||||| ||||| || ||||| || |||||| | || |||||||| || || | |||
Sbjct 107147 ATGCAGATCTTTGTCAAGACTCTCACTGGCAAGACCATCACTCTTGAGGTCGAGTCTTCC 107206
Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107
||| | ||||| | || || || || || ||||| || || || || || || |||
Sbjct 107207 GACACCATTGACAACGTGAAGTCCAAGATCCAGGACAAGGAGGGTATTCCCCCGGACCAA 107266
Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167
|||||| | || | ||| || || || |||| ||| || ||| | ||||| ||||||
Sbjct 107267 CAGCGTCTCATCTTCGCTGGTAAGCAGCTGGAGGACGGTCGCACCCTATCCGACTACAAC 107326
Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGC 27215
|||||||||||||||||| ||||| ||||| ||||| |||| ||||||
Sbjct 107327 ATTCAAAAGGAGTCGACCCTACATCTGGTTCTGCGTCTGCGTGGTGGC 107374
Score = 111 bits (122), Expect = 1e-19
Identities = 148/206 (72%), Gaps = 0/206 (0%)
Strand=Plus/Plus
Query 27012 ACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCCGACTCGATTGAGATGGTCAAACAA 27071
||||||||| |||| || || || || || | ||||| | || || | |||||
Sbjct 106425 ACCGGCAAGACTATCACCCTCGAGGTTGAGTCATCCGATACCATCGACAATGTCAAGTCC 106484
Query 27072 AAAATTCAAGACAAAGAAGGCATACCACCCGATCAACAGCGTTTAATATACGCCGGCAAA 27131
|| ||||| ||||| || ||||| || || || || || ||| | || | |||||||||
Sbjct 106485 AAGATTCAGGACAAGGAGGGCATCCCTCCGGACCAGCAACGTCTGATTTTCGCCGGCAAG 106544
Query 27132 CAATTGGAAGACAGTTCGACCGTTTCCGATTACAACATTCAAAAGGAGTCGACCTTACAT 27191
||| | || ||| | ||| | || ||||||||||| ||||||||||| || | ||
Sbjct 106545 CAACTCGAGGACGGCCGCACCCTCTCTGATTACAACATCCAAAAGGAGTCCACTCTCCAC 106604
Query 27192 TTGGTTTTGCGTTTGCGGGGTGGCAT 27217
||||| | ||| |||| ||||| ||
Sbjct 106605 TTGGTCCTCCGTCTGCGTGGTGGTAT 106630
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 434915350134720
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |