Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Davidsoniella_20virescens_20[genbank_20GCA_5F001513805.1_202016-01-
13] 561 sequences; 33,427,969 total letters
Query= NC_031033.1
Length=217124
Score E
Sequences producing significant alignments: (Bits) Value
seq85 161 1e-34
>seq85
Length=153405
Score = 161 bits (178), Expect = 1e-34
Identities = 452/686 (66%), Gaps = 6/686 (1%)
Strand=Plus/Minus
Query 77679 GCTATAGATGCTAGATTACAAACTGCTACCTCATTAGCGTTGGCA-TATTGTATTATCTC 77737
|||| || ||||| || || || || ||||||| | | ||| || | || || ||
Sbjct 96211 GCTAGCGAGGCTAGGTTGCATACGGCAACCTCATCGG-GAGCGCAGTACTCGATGATTTC 96153
Query 77738 GGTACATAGATTACTACATTTGATAGTGCCCAGATTTTGTTGGTTGCTCTTTTTATTGCA 77797
|| |||||||| | ||||||||| || |||| ||||||||||| || |||||
Sbjct 96152 AGTGCATAGATTGGAGCTGCGGATAGTGCCTAGGTTTTTCTGGTTGCTCTTCTTGTTGCA 96093
Query 77798 TGAGTCCTTATAAAGAATAAACGGAGTCCCGGTTTCAATCTGTGATTCGATAATAGATTT 77857
| |||||| || || || || || | ||||| || |||| | |||| ||| | |
Sbjct 96092 GGCGTCCTTGTACAGCATGAATGGGTTGCCGGTCTCGGTCTGGGCCTCGAGAATGGCGTA 96033
Query 77858 CCAGACGACTCTAG-CTTTTATCATA-GATTTGTATCGCCTCTCTCTTTCATATTGAGTA 77915
||| | | ||| | | || || || || | |||| || || || || | |
Sbjct 96032 CCACA-GCTTCTGGGCCTTGATGGTAAGACGGCCACGGCCT-TCACTCTCGTACTTCTCA 95975
Query 77916 TATAGCCGTTCAAATTCATCTCCCCAAACATCATCCAATCCAGGGCATTCATTTGGGCAC 77975
|| || || || || || || | |||| | | ||||||||| ||||| ||||||
Sbjct 95974 TACAGAGCCTCGAACTCCTCGCCGTAGCAATCAGCTAGTCCAGGGCACTCATTAGGGCAC 95915
Query 77976 ATCAATGACCAGTCACCATCTTCCTTAACTCGTTTCATAAAGAGATCAGGTATCCATAGA 78035
|| | || ||||| | | | | || || ||||| || ||||| || ||||| ||
Sbjct 95914 ATGAGTGTCCAGTTGGCGTTCTTTTCGACACGCTTCATGAACAGATCGGGAATCCACAGT 95855
Query 78036 GCAATAAATAGATCTCGGGTTCTATGTTCTTCATTTCCTGTATTCTTTTTAAGATCGAGA 78095
|| | || ||||| |||| | | || || || || ||||| ||||| ||
Sbjct 95854 GCTAGGAACAGATCACGGGCACGAATCTCCTCCTTGCCGTGGTTCTTGCGCAGATCAAGG 95795
Query 78096 AACTCCATAATATCAGAATGCCATGGTTCTAGATATATTGCCATAACTCCAGGTCGTTTA 78155
||||| | | ||| | ||||| || || || || || || | | || || || ||
Sbjct 95794 AACTCGAACACATCGGCGTGCCACGGCTCCAGGTAAATGGCAAAGGCACCGGGGCGCTTG 95735
Query 78156 TTACCTCCCTGATCTATATATCTGGCGGTGTTATTATAAACTCTCAACATTGGAATAATA 78215
||||| ||||| || | || | ||| ||||| || | || | || ||| |||| |||
Sbjct 95734 TTACCACCCTGGTCGACGTAGCGGGCAGTGTTGTTGAAGACACGCAGCATGGGAACAATG 95675
Query 78216 CCGTTAGATGTTCCATTTGTTCCAGAAATATAACTTCCACTTGCGCGAATATTACTAATG 78275
|||||||| || || || || |||| ||| || ||| | || || ||| | |
Sbjct 95674 CCGTTAGACGTGCCGTTGGTGCCAGCAATGTACGAGCCAGTGGCACGGATACGGTGGACG 95615
Query 78276 GATATCCCTATTCCTCCTGCCATCTTAGATATTAGAGCGCAACGTTTCAATGTATCGTAG 78335
| || || || || |||||||| || || | ||| ||| |||| |||||||||
Sbjct 95614 TTCAGACCGATACCGCCGGCCATCTTGGAGATCATAGCACAAGTCTTCAGCGTATCGTAG 95555
Query 78336 ATACCCTCTATACTGTCATCCATCAT 78361
||||| || || ||||| ||| ||||
Sbjct 95554 ATACCATCAATGCTGTCGTCCTTCAT 95529
Score = 91.5 bits (100), Expect = 2e-13
Identities = 142/203 (70%), Gaps = 0/203 (0%)
Strand=Plus/Minus
Query 76782 GTAAACTGAATTGGAGAAGATGCGGGTTTTGTACGTAGATAGTACATACCAGTTTTTAGA 76841
|| |||||||| |||| || |||| | |||||||| ||||||||||| || || |||
Sbjct 97117 GTGAACTGAATGGGAGCAGCGGCGGCCTGGGTACGTAGGTAGTACATACCGGTCTTGAGA 97058
Query 76842 CCCAGACTCCATCCGTAGAAATGCATGCTTGTCAGTTTGGAATAACTAGGATCGGCTATA 76901
|| || |||| ||| || |||||||| || | || | |||| || ||
Sbjct 97057 CCGAGCTTCCAGCCGGCAAAGTGCATGCTGGTGATCTTACCCATAGTAGGGTCCTTCATG 96998
Query 76902 TGAATATTCATCGACTGACTTTGATCGATGAAAGCTCCTCTATCAGCCGCCATTTTTATA 76961
||||| |||| |||||| || ||||||||||| || | ||| || ||||| | | |
Sbjct 96997 TGAATGTTCAGCGACTGCGACTGGTCGATGAAAGCGCCACGATCGGCAGCCATCTGCACA 96938
Query 76962 ATGGTCTTTTGAGGAATTTCCCA 76984
| ||| |||| ||| |||||
Sbjct 96937 ACGGTACGCTGAGAAATCTCCCA 96915
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 694663928635040
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |