Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Davidsoniella_20virescens_20[genbank_20GCA_5F001513805.1_202016-01- 13] 561 sequences; 33,427,969 total letters Query= NC_031038.1 Length=222832 Score E Sequences producing significant alignments: (Bits) Value seq85 147 3e-30 >seq85 Length=153405 Score = 147 bits (162), Expect = 3e-30 Identities = 1010/1604 (63%), Gaps = 39/1604 (2%) Strand=Plus/Minus Query 75377 GTGAACTGAATGGGAGAGGATGCTGGTTTTGTACGTAGATAGTACATACCAGTTTTTAGA 75436 |||||||||||||||| | || | | |||||||| ||||||||||| || || ||| Sbjct 97117 GTGAACTGAATGGGAGCAGCGGCGGCCTGGGTACGTAGGTAGTACATACCGGTCTTGAGA 97058 Query 75437 CCCAGACTCCATCCGTAGAAATGCATGCTTGTTAGTTTGGAATAACTCGGATCGGCTATA 75496 || || |||| ||| || |||||||| || | || | | || || || Sbjct 97057 CCGAGCTTCCAGCCGGCAAAGTGCATGCTGGTGATCTTACCCATAGTAGGGTCCTTCATG 96998 Query 75497 TGAATATTCATCGACTGACTTTGATCGATGAAAGCTCCTCTATCAGCCGCCATTTTTATA 75556 ||||| |||| |||||| || ||||||||||| || | ||| || ||||| | | | Sbjct 96997 TGAATGTTCAGCGACTGCGACTGGTCGATGAAAGCGCCACGATCGGCAGCCATCTGCACA 96938 Query 75557 ATGGTCTTTTGAGGAATTTCCCAAATAGTTTTGAAAACTTGTTTGATATCATCTGGAAGA 75616 | ||| |||| ||| ||||| | || ||| | | ||||| || | || | | Sbjct 96937 ACGGTACGCTGAGAAATCTCCCAGACGGTCTTGTACAGGGCCTTGATGTCGGCGGGGATA 96878 Query 75617 TTTG---TATTTTGAATGGATCCGCCATCAGATATAATTGTATTCTTGATCTCATCATTC 75673 || | | ||||| | || ||| ||| | || || ||||| || || | Sbjct 96877 TTAGGGATGTTTTGGACCGAACCGTTATCCGCAATGATACGGTTCTTCATGGTGTCGGAC 96818 Query 75674 CACA----ATTTTCTCTCGGTTAAAACTCTAAGGAGATGAGGATTAACAATTTGAAATTC 75729 |||| | || | | | | | || || || ||||||| || || || Sbjct 96817 CACAGGCCAAGATCGACCAGGTCACGCAGCAACCAG----GGGTTAACAACCTGGAACTC 96762 Query 75730 TCCAGACAATACTCTTCGAGTGTAAATATTACTGGTATATGGTTCCACAGATTCATTGTT 75789 |||| || || | || ||| || || ||| || || || | | || ||||| Sbjct 96761 ACCAGCCAGCACACGGCGCTGGTAGATGTTCGAGGTGTAAGGCTCGAAGCACTCGTTGTT 96702 Query 75790 TCCCAAAATTTGAGCAGTTGAAGCAGTCGGCATAGGTGCCACCAATAAACTATTTCTGAG 75849 || | || |||| || || ||||| |||||||| |||| | || || | | Sbjct 96701 GCCTAGGATCTGAGAGGTCGAGGCAGTTGGCATAGGAGCCAGGAGTAGCGAGTTGCGCAC 96642 Query 75850 ACCATG-TGTTCTGATTTTATCTTTTAGATATTTCCAATCCCAAAGATCTGATGGTACAA 75908 || || || | |||| | || || || | ||| ||||| || || || || Sbjct 96641 GCCGTGCTGCT-TGATCTGTTCCTTGAGCGAGGCCCAGTCCCACAGGTCACTAGGGGTAA 96583 Query 75909 CATCCCAGAGATCGTATTGTAGAATTCCGTT-GCTAGCATATGATCCATTATATGTTTCG 75967 | | ||| | ||| | || || || || | | || || || || | ||| || | Sbjct 96582 CGTTCCACATGTCGAACTGCAGGATACCCTGAGATA-CAGGCGAACCCTCATAGGTGGAG 96524 Query 75968 TAAGTCCCGTCCTTTTCAGCTAGTTCGCAACTCGCCTCTAACGCACCGTAATAAATTGTT 76027 ||||| || || ||| ||| | ||||| || | ||| ||| || || || Sbjct 96523 TAAGTACCCTCGGTTTGAGCAATCTCGCACGAGGCAGTCAGGGCAGCGTGGTAGATGGTC 96464 Query 76028 TCGAAAATCTTCTTATTAAGATCTTGCGCTTCA--AGACTATCAAAAGGATAATGTAAAA 76085 ||||| |||| ||| || ||| | || || ||||| | ||||| ||| | Sbjct 96463 TCGAAGATCTGCTTGTTCAGAGTGCGGGCCTCGGCAGACT--CGAAAGGC--ATGCGTAG 96408 Query 76086 GAATA--AATGCATCTGCTAGTCCCTGAACTCCAATACCAATAGGTCTATGTCTCTTATT 76143 | || || ||||| ||||| ||||| || |||| |||||| || | ||| | | | || Sbjct 96407 GGCTAGGAAAGCATCGGCTAGACCCTGGACACCAACACCAATGGGGCGATGACGCATGTT 96348 Query 76144 GGAAATTTCAGCTTCTGGAATAGGGTAATAATTAATATCTATAATTTTATTGAGATTTCT 76203 | | | ||| || || | |||||| | || | ||| ||||| ||| || || | Sbjct 96347 GCTGTTGTGAGCCTCAGGCACAGGGTAGTGGTTGACATCGATAATGCGATTCAGGTTACG 96288 Query 76204 GACAACTACTTTAACCACGTCCTTTAGTTTGAGAAAATCAAATTTTCCATC----TA-TC 76258 || || || || | || | || || | ||||| | | ||| | || || Sbjct 96287 CACGACCACCTTGGTGATCTCGTGCAGCTTCTGGAAATCGTACTCTCCTTTGTTGTAGTC 96228 Query 76259 -ACAAAC-ATATTAAGAGCTATAGATGCTAGATTACAAACGGCTACCTCATTAGCATTGG 76316 ||||| || || | |||| || ||||| || || ||||| ||||||| | | | Sbjct 96227 GACAAAGGATGGTAGG-GCTAGCGAGGCTAGGTTGCATACGGCAACCTCATCGGGAGCGC 96169 Query 76317 CATATTGTATTATCTCCGTGCATAGATTACTACACTTGATAGTTCCAAGATTTTGTTGGT 76376 || | || || || ||||||||||| | |||||| || || |||| |||| Sbjct 96168 AGTACTCGATGATTTCAGTGCATAGATTGGAGCTGCGGATAGTGCCTAGGTTTTTCTGGT 96109 Query 76377 TGCTCTTTTTGTTACATGAGTCCTTATAAAGAACAAACGGAGTTCCAGTTTCAATCTGTG 76436 ||||||| ||||| || | |||||| || || | || || | || || || |||| | Sbjct 96108 TGCTCTTCTTGTTGCAGGCGTCCTTGTACAGCATGAATGGGTTGCCGGTCTCGGTCTGGG 96049 Query 76437 ATTCGATAATAGATTTCCAGACGACTCTAG-CTTTTATTATA-GATTTGTATCGCTTCTC 76494 |||| ||| | | ||| | | ||| | | || || || || | || | || Sbjct 96048 CCTCGAGAATGGCGTACCACA-GCTTCTGGGCCTTGATGGTAAGACGGCCACGGCCT-TC 95991 Query 76495 TCTTTCATA-TTGTG-TATATAACCGTTCAAATTCATCTCCCCAAACATCATCCAAACCA 76552 || || || || | || | | || || || || || || | |||| | | ||| Sbjct 95990 ACTCTCGTACTTCTCATACAGAGCC--TCGAACTCCTCGCCGTAGCAATCAGCTAGTCCA 95933 Query 76553 GGACATTCATTCGGACACATCAATGACCACTCACCATCTTCCTTAACCCGTTTCATAAAG 76612 || || ||||| || ||||| | || ||| | | | | | || || ||||| || Sbjct 95932 GGGCACTCATTAGGGCACATGAGTGTCCAGTTGGCGTTCTTTTCGACACGCTTCATGAAC 95873 Query 76613 AGATCAGGTATCCATAGAGCAATAAATAGATCTCGGGTTCTACGTTCTTCATTTCCTGTA 76672 ||||| || ||||| || || | || ||||| |||| | | || || || || Sbjct 95872 AGATCGGGAATCCACAGTGCTAGGAACAGATCACGGGCACGAATCTCCTCCTTGCCGTGG 95813 Query 76673 TTCTTTTTAAGATCTAGGAACTCCATAATATCAGAATGCCATGGTTCTAGATATATCGCC 76732 ||||| ||||| |||||||| | | ||| | ||||| || || || || || || Sbjct 95812 TTCTTGCGCAGATCAAGGAACTCGAACACATCGGCGTGCCACGGCTCCAGGTAAATGGCA 95753 Query 76733 ATAACACCCGGTCGTTTATTACCTCCCTGATCTATATATCTGGCAGTGTTATTATAAACT 76792 | |||| || || || ||||| ||||| || | || | ||||||||| || | || Sbjct 95752 AAGGCACCGGGGCGCTTGTTACCACCCTGGTCGACGTAGCGGGCAGTGTTGTTGAAGACA 95693 Query 76793 CTCAACATTGGAATAATGCCGTTAGATGTACCATTTGTTCCAGAAATATAACTTCCACAT 76852 | || ||| |||| |||||||||||| || || || || |||| ||| || ||| Sbjct 95692 CGCAGCATGGGAACAATGCCGTTAGACGTGCCGTTGGTGCCAGCAATGTACGAGCCAGTG 95633 Query 76853 GCACGAATATTACTAATAGATAGGCCTATTCCTCCTGCCATTTTAGAGATTAGAGCACAG 76912 ||||| ||| | || || || || || ||||| || ||||| | |||||| Sbjct 95632 GCACGGATACGGTGGACGTTCAGACCGATACCGCCGGCCATCTTGGAGATCATAGCACAA 95573 Query 76913 CGTTTCAATGTGTCATAGATGCCCTCTATACTATCATCCATCAT 76956 |||| || || ||||| || || || || || ||| |||| Sbjct 95572 GTCTTCAGCGTATCGTAGATACCATCAATGCTGTCGTCCTTCAT 95529 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 712929400547520