Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Davidsoniella_20virescens_20[genbank_20GCA_5F001513805.1_202016-01-
13] 561 sequences; 33,427,969 total letters
Query= NC_031038.1
Length=222832
Score E
Sequences producing significant alignments: (Bits) Value
seq85 147 3e-30
>seq85
Length=153405
Score = 147 bits (162), Expect = 3e-30
Identities = 1010/1604 (63%), Gaps = 39/1604 (2%)
Strand=Plus/Minus
Query 75377 GTGAACTGAATGGGAGAGGATGCTGGTTTTGTACGTAGATAGTACATACCAGTTTTTAGA 75436
|||||||||||||||| | || | | |||||||| ||||||||||| || || |||
Sbjct 97117 GTGAACTGAATGGGAGCAGCGGCGGCCTGGGTACGTAGGTAGTACATACCGGTCTTGAGA 97058
Query 75437 CCCAGACTCCATCCGTAGAAATGCATGCTTGTTAGTTTGGAATAACTCGGATCGGCTATA 75496
|| || |||| ||| || |||||||| || | || | | || || ||
Sbjct 97057 CCGAGCTTCCAGCCGGCAAAGTGCATGCTGGTGATCTTACCCATAGTAGGGTCCTTCATG 96998
Query 75497 TGAATATTCATCGACTGACTTTGATCGATGAAAGCTCCTCTATCAGCCGCCATTTTTATA 75556
||||| |||| |||||| || ||||||||||| || | ||| || ||||| | | |
Sbjct 96997 TGAATGTTCAGCGACTGCGACTGGTCGATGAAAGCGCCACGATCGGCAGCCATCTGCACA 96938
Query 75557 ATGGTCTTTTGAGGAATTTCCCAAATAGTTTTGAAAACTTGTTTGATATCATCTGGAAGA 75616
| ||| |||| ||| ||||| | || ||| | | ||||| || | || | |
Sbjct 96937 ACGGTACGCTGAGAAATCTCCCAGACGGTCTTGTACAGGGCCTTGATGTCGGCGGGGATA 96878
Query 75617 TTTG---TATTTTGAATGGATCCGCCATCAGATATAATTGTATTCTTGATCTCATCATTC 75673
|| | | ||||| | || ||| ||| | || || ||||| || || |
Sbjct 96877 TTAGGGATGTTTTGGACCGAACCGTTATCCGCAATGATACGGTTCTTCATGGTGTCGGAC 96818
Query 75674 CACA----ATTTTCTCTCGGTTAAAACTCTAAGGAGATGAGGATTAACAATTTGAAATTC 75729
|||| | || | | | | | || || || ||||||| || || ||
Sbjct 96817 CACAGGCCAAGATCGACCAGGTCACGCAGCAACCAG----GGGTTAACAACCTGGAACTC 96762
Query 75730 TCCAGACAATACTCTTCGAGTGTAAATATTACTGGTATATGGTTCCACAGATTCATTGTT 75789
|||| || || | || ||| || || ||| || || || | | || |||||
Sbjct 96761 ACCAGCCAGCACACGGCGCTGGTAGATGTTCGAGGTGTAAGGCTCGAAGCACTCGTTGTT 96702
Query 75790 TCCCAAAATTTGAGCAGTTGAAGCAGTCGGCATAGGTGCCACCAATAAACTATTTCTGAG 75849
|| | || |||| || || ||||| |||||||| |||| | || || | |
Sbjct 96701 GCCTAGGATCTGAGAGGTCGAGGCAGTTGGCATAGGAGCCAGGAGTAGCGAGTTGCGCAC 96642
Query 75850 ACCATG-TGTTCTGATTTTATCTTTTAGATATTTCCAATCCCAAAGATCTGATGGTACAA 75908
|| || || | |||| | || || || | ||| ||||| || || || ||
Sbjct 96641 GCCGTGCTGCT-TGATCTGTTCCTTGAGCGAGGCCCAGTCCCACAGGTCACTAGGGGTAA 96583
Query 75909 CATCCCAGAGATCGTATTGTAGAATTCCGTT-GCTAGCATATGATCCATTATATGTTTCG 75967
| | ||| | ||| | || || || || | | || || || || | ||| || |
Sbjct 96582 CGTTCCACATGTCGAACTGCAGGATACCCTGAGATA-CAGGCGAACCCTCATAGGTGGAG 96524
Query 75968 TAAGTCCCGTCCTTTTCAGCTAGTTCGCAACTCGCCTCTAACGCACCGTAATAAATTGTT 76027
||||| || || ||| ||| | ||||| || | ||| ||| || || ||
Sbjct 96523 TAAGTACCCTCGGTTTGAGCAATCTCGCACGAGGCAGTCAGGGCAGCGTGGTAGATGGTC 96464
Query 76028 TCGAAAATCTTCTTATTAAGATCTTGCGCTTCA--AGACTATCAAAAGGATAATGTAAAA 76085
||||| |||| ||| || ||| | || || ||||| | ||||| ||| |
Sbjct 96463 TCGAAGATCTGCTTGTTCAGAGTGCGGGCCTCGGCAGACT--CGAAAGGC--ATGCGTAG 96408
Query 76086 GAATA--AATGCATCTGCTAGTCCCTGAACTCCAATACCAATAGGTCTATGTCTCTTATT 76143
| || || ||||| ||||| ||||| || |||| |||||| || | ||| | | | ||
Sbjct 96407 GGCTAGGAAAGCATCGGCTAGACCCTGGACACCAACACCAATGGGGCGATGACGCATGTT 96348
Query 76144 GGAAATTTCAGCTTCTGGAATAGGGTAATAATTAATATCTATAATTTTATTGAGATTTCT 76203
| | | ||| || || | |||||| | || | ||| ||||| ||| || || |
Sbjct 96347 GCTGTTGTGAGCCTCAGGCACAGGGTAGTGGTTGACATCGATAATGCGATTCAGGTTACG 96288
Query 76204 GACAACTACTTTAACCACGTCCTTTAGTTTGAGAAAATCAAATTTTCCATC----TA-TC 76258
|| || || || | || | || || | ||||| | | ||| | || ||
Sbjct 96287 CACGACCACCTTGGTGATCTCGTGCAGCTTCTGGAAATCGTACTCTCCTTTGTTGTAGTC 96228
Query 76259 -ACAAAC-ATATTAAGAGCTATAGATGCTAGATTACAAACGGCTACCTCATTAGCATTGG 76316
||||| || || | |||| || ||||| || || ||||| ||||||| | | |
Sbjct 96227 GACAAAGGATGGTAGG-GCTAGCGAGGCTAGGTTGCATACGGCAACCTCATCGGGAGCGC 96169
Query 76317 CATATTGTATTATCTCCGTGCATAGATTACTACACTTGATAGTTCCAAGATTTTGTTGGT 76376
|| | || || || ||||||||||| | |||||| || || |||| ||||
Sbjct 96168 AGTACTCGATGATTTCAGTGCATAGATTGGAGCTGCGGATAGTGCCTAGGTTTTTCTGGT 96109
Query 76377 TGCTCTTTTTGTTACATGAGTCCTTATAAAGAACAAACGGAGTTCCAGTTTCAATCTGTG 76436
||||||| ||||| || | |||||| || || | || || | || || || |||| |
Sbjct 96108 TGCTCTTCTTGTTGCAGGCGTCCTTGTACAGCATGAATGGGTTGCCGGTCTCGGTCTGGG 96049
Query 76437 ATTCGATAATAGATTTCCAGACGACTCTAG-CTTTTATTATA-GATTTGTATCGCTTCTC 76494
|||| ||| | | ||| | | ||| | | || || || || | || | ||
Sbjct 96048 CCTCGAGAATGGCGTACCACA-GCTTCTGGGCCTTGATGGTAAGACGGCCACGGCCT-TC 95991
Query 76495 TCTTTCATA-TTGTG-TATATAACCGTTCAAATTCATCTCCCCAAACATCATCCAAACCA 76552
|| || || || | || | | || || || || || || | |||| | | |||
Sbjct 95990 ACTCTCGTACTTCTCATACAGAGCC--TCGAACTCCTCGCCGTAGCAATCAGCTAGTCCA 95933
Query 76553 GGACATTCATTCGGACACATCAATGACCACTCACCATCTTCCTTAACCCGTTTCATAAAG 76612
|| || ||||| || ||||| | || ||| | | | | | || || ||||| ||
Sbjct 95932 GGGCACTCATTAGGGCACATGAGTGTCCAGTTGGCGTTCTTTTCGACACGCTTCATGAAC 95873
Query 76613 AGATCAGGTATCCATAGAGCAATAAATAGATCTCGGGTTCTACGTTCTTCATTTCCTGTA 76672
||||| || ||||| || || | || ||||| |||| | | || || || ||
Sbjct 95872 AGATCGGGAATCCACAGTGCTAGGAACAGATCACGGGCACGAATCTCCTCCTTGCCGTGG 95813
Query 76673 TTCTTTTTAAGATCTAGGAACTCCATAATATCAGAATGCCATGGTTCTAGATATATCGCC 76732
||||| ||||| |||||||| | | ||| | ||||| || || || || || ||
Sbjct 95812 TTCTTGCGCAGATCAAGGAACTCGAACACATCGGCGTGCCACGGCTCCAGGTAAATGGCA 95753
Query 76733 ATAACACCCGGTCGTTTATTACCTCCCTGATCTATATATCTGGCAGTGTTATTATAAACT 76792
| |||| || || || ||||| ||||| || | || | ||||||||| || | ||
Sbjct 95752 AAGGCACCGGGGCGCTTGTTACCACCCTGGTCGACGTAGCGGGCAGTGTTGTTGAAGACA 95693
Query 76793 CTCAACATTGGAATAATGCCGTTAGATGTACCATTTGTTCCAGAAATATAACTTCCACAT 76852
| || ||| |||| |||||||||||| || || || || |||| ||| || |||
Sbjct 95692 CGCAGCATGGGAACAATGCCGTTAGACGTGCCGTTGGTGCCAGCAATGTACGAGCCAGTG 95633
Query 76853 GCACGAATATTACTAATAGATAGGCCTATTCCTCCTGCCATTTTAGAGATTAGAGCACAG 76912
||||| ||| | || || || || || ||||| || ||||| | ||||||
Sbjct 95632 GCACGGATACGGTGGACGTTCAGACCGATACCGCCGGCCATCTTGGAGATCATAGCACAA 95573
Query 76913 CGTTTCAATGTGTCATAGATGCCCTCTATACTATCATCCATCAT 76956
|||| || || ||||| || || || || || ||| ||||
Sbjct 95572 GTCTTCAGCGTATCGTAGATACCATCAATGCTGTCGTCCTTCAT 95529
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 712929400547520
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |