Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Diaporthe_20ampelina_20[genbank_20GCA_5F001006365.1_202015-05-13] 2,383 sequences; 47,325,858 total letters Query= NC_001266.1 Length=159857 Score E Sequences producing significant alignments: (Bits) Value seq1786 86.0 6e-12 >seq1786 Length=271448 Score = 86.0 bits (94), Expect = 6e-12 Identities = 119/167 (71%), Gaps = 0/167 (0%) Strand=Plus/Minus Query 16472 ATATACGTATCAATCAGTAAACTGTACATTTCTGAGTGTATGTTCTCTATGGCTATCTGA 16531 || || |||||||| || | | ||| | |||||||| |||||||| || ||||| Sbjct 165152 ATGTAGGTATCAATGAGGAGAGAGTATGTCTCTGAGTGGATGTTCTCCATCATGATCTGG 165093 Query 16532 AATCCATAGAAGCATCGAGCCTCCGCTATTTGTACTTCCACGTAAAATCGTTCCGCCAGG 16591 || || ||||||||||||||||| | || || || || || || || ||| | ||| Sbjct 165092 AAGCCGTAGAAGCATCGAGCCTCGGGGATCTGAACCTCGCCGCTGAACCGCTCCACGAGG 165033 Query 16592 TTCTCATTCACGATACCGTCACTTGCAGCAAAAAACGCCAATATGTG 16638 ||||| || ||||| || || ||||| || || || | ||||| Sbjct 165032 TTCTCGTTGACGATTCCATCTGAAGCAGCGAAGAAGGCGAGGATGTG 164986 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 511399166243560