Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Diaporthe_20ampelina_20[genbank_20GCA_5F001006365.1_202015-05-13] 2,383 sequences; 47,325,858 total letters Query= NC_001650.2 Length=184439 Score E Sequences producing significant alignments: (Bits) Value seq1540 221 1e-52 >seq1540 Length=209369 Score = 221 bits (244), Expect = 1e-52 Identities = 289/399 (72%), Gaps = 6/399 (2%) Strand=Plus/Plus Query 145870 ACGTAGAACTGGCACAGGAGGTGGCAGGGCGGCAGGGCCATGGCGGGCAGGTCCGCCGGG 145929 ||||||||||| | | |||||| |||||||| ||||| |||||| || ||| Sbjct 103456 ACGTAGAACTGCGCGAACATGTGGCACGGCGGCAGCGCCATCTTCTTCAGGTCGGCGGGG 103515 Query 145930 TTCCAGGCGGTGAGGACGAGCCTCCTGCTCTCGGGGTTCCTCTTGATCTCCCCTATCAGG 145989 ||||| ||| | | || || | || | | |||||| || ||| || |||| Sbjct 103516 TTCCACGCGCTCATGATGATGCGCCGGTCGTACGGGTTCGTCCTGAGCTTGTGGATCACC 103575 Query 145990 TCCCTGAGCTGGTCCACGCCCTGCCCCCGGTAATCTGTCTTGGAGTCCACGTACGCGGCC 146049 || ||||||||| |||||||| ||| ||| || | | | | ||| |||||| ||||| Sbjct 103576 TCGGCGAGCTGGTCGACGCCCTGGCCCGTGTAGTCGGCCCTCGCGTCGACGTACTCGGCC 103635 Query 146050 CCGAAGTGCCTCCACTGGAACCCGTAGACGGGCCCCAGGTCCCCGGGCTCCCTGTGCCCC 146109 |||||||| | ||||||||||||||||||||| |||||||| || ||||| | ||| || Sbjct 103636 CCGAAGTGGCGCCACTGGAACCCGTAGACGGGGCCCAGGTCGCCCGGCTCGCGGTGGCCT 103695 Query 146110 AGCCCGGCCCGGGCGAGGAAGTCCCGGGACCCGTTGGCGTCCCAGATCTTGACGCCCCTC 146169 |||||| | | | |||| | || || || |||||| |||||||||||||||||||| | Sbjct 103696 AGCCCGACGCTGTCGAGATACTCGCGCGAGCCGTTGCCGTCCCAGATCTTGACGCCCTGC 103755 Query 146170 GCGGAGAGCTCATTGGAGTCCGTGGAC---CCCCTGATGAACCAGAGCAGCTCTTCGAGG 146226 | |||||| | || || || | ||| |||||||| |||||||| |||| Sbjct 103756 TCCGAGAGCGAAAGCGA---CGAGGTCTCGCCCGATATGAACCACAGCAGCTCGGCGAGC 103812 Query 146227 ACCCCCCTCCAGAAGACCCTCTTGGTGGTCAGCAGGGGG 146265 ||| || || |||||| | ||| ||||| || || ||| Sbjct 103813 ACCGCCTTCTGGAAGACGCGCTTTGTGGTAAGGAGCGGG 103851 Score = 158 bits (174), Expect = 1e-33 Identities = 231/319 (72%), Gaps = 11/319 (3%) Strand=Plus/Plus Query 145540 ACCGCCATCTCCATGGGGATGGCCGCGTGGGGGTGGTAGCCCTCCAGCGCAAAGTCCTCC 145599 |||| ||||| ||| | || | | ||| |||| || |||| || | |||| ||||| Sbjct 103057 ACCGACATCTTCATTGCAATCGTCTTGTGCGGGTTATACCCCTTCACCTCAAAATCCTCG 103116 Query 145600 GCCCTGAAGTCATCTATGTCCTCCACCCGCCTCAGG----ATCCTGAGC-CTGGGAAAGG 145654 || | || | |||||| | || ||| ||| | ||| |||| | ||||| Sbjct 103117 ACCTTCCAGCCGTCTATG-CTGCCGCCCTTCTCCCGTTTGATCTCGAGCTCGGGGAACTC 103175 Query 145655 GCCGGGGGCTCCTGGTC-AGCTGGAGCTTCAGGGGCTCCACGTGGTTGAGGTAGACGTGC 145713 || | |||||| || ||||| | | | |||| || ||||||| |||||||||| Sbjct 103176 GC--GCGGCTCCCTCTCCAGCTGCACCCTGAGGGCATCGACGTGGTCCGCGTAGACGTGC 103233 Query 145714 GCGTCCCCCAGGACGTGGATGAAG-TCCCCGGGCTCGAGGCCCGTGAGGTGGGCGACCAT 145772 ||||| |||| |||||| ||| | |||||||| | |||| | | ||| |||| ||| Sbjct 103234 GCGTCGCCCATGACGTGCGTGAGGCTCCCCGGGAT-GAGGTCGCACACGTGCGCGATCAT 103292 Query 145773 GTAGGTCAGCAGGGAGTAGCTGGCTATGTTGAAGGGCACCCCCAGCCCCATGTCCCCCGA 145832 || |||||||| |||||||| || |||||||| ||||| ||||| |||||||| | || Sbjct 103293 GTGTGTCAGCAGCGAGTAGCTCGCGATGTTGAACGGCACGCCCAGGCCCATGTCGCAGGA 103352 Query 145833 GCGCTGGTACAGCTGGCAG 145851 ||||||||||||||||||| Sbjct 103353 GCGCTGGTACAGCTGGCAG 103371 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 590059223087320