Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Diaporthe_20ampelina_20[genbank_20GCA_5F001006365.1_202015-05-13] 2,383 sequences; 47,325,858 total letters Query= NC_002687.1 Length=335593 Score E Sequences producing significant alignments: (Bits) Value seq1974 98.7 2e-15 seq1567 87.8 4e-12 >seq1974 Length=94343 Score = 98.7 bits (108), Expect = 2e-15 Identities = 111/149 (74%), Gaps = 0/149 (0%) Strand=Plus/Minus Query 254020 ACGGTCCTCCCGGAACAGGCAAGACGTCAACCATCCTGGCGCTGGCCCGAACCCTGTTGG 254079 ||||||| ||||| ||||| ||||| || || || || || || ||||| | | | | Sbjct 91515 ACGGTCCCCCCGGTACAGGAAAGACCTCGACGATACTTGCCCTCGCCCGCCGCATCTATG 91456 Query 254080 GCGAGGGGAACATGAGAGAGCGCGTGCTCGAGCTGAACGCTTCTGACGAACGCGGGTTGG 254139 || | |||||| || || || ||||| ||||||||||||||||| || || | | Sbjct 91455 GCACCGACAACATGCGACAGATGGTTCTCGAACTGAACGCTTCTGACGACCGTGGCATCG 91396 Query 254140 ACGTCGTCCGCGACAAGATCAAGACTTTC 254168 ||||||| ||||| | |||||||||||| Sbjct 91395 ACGTCGTGCGCGAGCAAATCAAGACTTTC 91367 >seq1567 Length=46990 Score = 87.8 bits (96), Expect = 4e-12 Identities = 180/266 (68%), Gaps = 15/266 (6%) Strand=Plus/Plus Query 254103 GTGCTCGAGCTGAACGCTTCTGACGAACGCGGGTTGGACGTCGTCCGCGACAAGATCAAG 254162 || || ||||| ||||| || ||||| || || | ||||| || ||| || ||||||| Sbjct 40928 GTCCTGGAGCTCAACGCCTCGGACGAGCGGGGCATCGACGTGGTGCGCAACCGGATCAAG 40987 Query 254163 ACTTTCTCCAAGATGTCGATTTCGTCGTTCCAACCCGGCTGTCCGCCTTTCAAGCTCGTG 254222 ||| | ||| | | | | | ||||| | ||||| |||| |||| Sbjct 40988 GGCTTCGCGCAGAAGAAGGTCACACTG-------CCGGCCGGCCGCCA--CAAGATCGTC 41038 Query 254223 ATCCTGGACGAGGCGGACACCATGACGGCCGACGCGCAGTCCGCCCTCCGCCGAACGATG 254282 |||||||||||||| |||| ||||||| | | ||||||| || || || || |||||| Sbjct 41039 ATCCTGGACGAGGCCGACAGCATGACGTCGGGCGCGCAGCAGGCGCTGCGGCGCACGATG 41098 Query 254283 GAGACGCACTCCGTTGTGACGCGTTTTTGCCTGGTGTGCAACTACGTGTC---GAAGATC 254339 |||| ||||| |||||| || | | | |||||| | ||| |||||| Sbjct 41099 GAGATCTACTCCAACACGACGCGCTTCGCCTTCGCATGCAACCA---GTCCAACAAGATC 41155 Query 254340 ATCGCCCCGCTGGCTTCTCGGTGCGC 254365 |||| |||||| || |||||||| Sbjct 41156 ATCGAGCCGCTGCAGTCGCGGTGCGC 41181 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1073733615562944