Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Diaporthe_20ampelina_20[genbank_20GCA_5F001006365.1_202015-05-13] 2,383 sequences; 47,325,858 total letters Query= NC_003225.3 Length=309286 Score E Sequences producing significant alignments: (Bits) Value seq1786 109 1e-18 seq1963 93.3 8e-14 >seq1786 Length=271448 Score = 109 bits (120), Expect = 1e-18 Identities = 117/155 (75%), Gaps = 0/155 (0%) Strand=Plus/Plus Query 101918 GTTGCCTTTGCTGCAGTTGAAGGAATCTTCTTTAGTGGTGCATTCGCATCCATTTTCTGG 101977 ||||||||||| || || || || |||||||| || || |||||||| ||||| |||||| Sbjct 165333 GTTGCCTTTGCCGCCGTCGAGGGTATCTTCTTCAGCGGCGCATTCGCTTCCATCTTCTGG 165392 Query 101978 ATCAAGAACAGGGGTATTTTGCCTGGTCTCACCTCCTCCAATGAGTTCATTTCTAGGGAC 102037 ||||||| | || | ||||||| || |||| |||||| || | || ||| | || Sbjct 165393 CTCAAGAAGCGTGGGCTCATGCCTGGCCTGACCTTCTCCAACGAACTGATCTCTCGTGAT 165452 Query 102038 GAAGGTCTTCATCGCGACTTTGCATGCATGCTGTT 102072 || ||||| || |||||| || || ||||||| Sbjct 165453 GAGGGTCTGCACACCGACTTCGCCTGTCTGCTGTT 165487 >seq1963 Length=539952 Score = 93.3 bits (102), Expect = 8e-14 Identities = 179/264 (68%), Gaps = 0/264 (0%) Strand=Plus/Plus Query 94779 GTGGATGCCGAGTCCTCCAGCAGTCTTGGAGATGATTGCCGCCTCCTTAAGAGTATCATA 94838 || || ||||| ||||| || |||||||||| || || ||| || || || || Sbjct 430363 GTTGAGGCCGATACCTCCCGCCATCTTGGAGATCATGGCACAGGTCTTGAGCGTGTCGTA 430422 Query 94839 AATACCCTCAATGCTATCATCTTGAAGGCCCAGAAGGAAGCACGAGGAAAGTTGGGGTGT 94898 || ||||||||||| || || | | | | ||||||||||| || || ||||| Sbjct 430423 GATGCCCTCAATGCTGTCCTCCTTCATATCGACGAGGAAGCACGATGACAGCTGGGGCTG 430482 Query 94899 GACTGTTCCACAATTAAACAGTGTGGGGGAAGCATGGGTAAAATAGTGCCTCGACATGAG 94958 | || ||| ||| || | |||||| || || ||||| || | | | ||||| || Sbjct 430483 GGGAGTGCCAGCATTGAATAATGTGGGCGAGGCGTGGGTGAAGAACTTGTTGGACATCAG 430542 Query 94959 ATCATATGTTTCAATGACAGATTTGATGTCTGATCCGTGAATGCCGACAGCCACACGCAT 95018 | || || || ||||| | || ||| ||| ||||||||||| |||||||| Sbjct 430543 GTTGTACGTCTCGATGACTCTCTCGACGTCATCTCCCCAGATGCCGACAGCGACACGCAT 430602 Query 95019 AATCATGTCCTGAGGGCGCTCAAC 95042 ||||||| || || ||||| || Sbjct 430603 GATCATGTGTTGTGGCCGCTCGAC 430626 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 989553785835765