Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Diaporthe_20ampelina_20[genbank_20GCA_5F001006365.1_202015-05-13] 2,383 sequences; 47,325,858 total letters Query= NC_005309.1 Length=359853 Score E Sequences producing significant alignments: (Bits) Value seq1808 140 7e-28 >seq1808 Length=99283 Score = 140 bits (154), Expect = 7e-28 Identities = 158/212 (75%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 104348 AGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCT 104407 || || || || | ||||||||| |||||||| || ||||| || || || | ||||| Sbjct 19566 AGAACCAGGTGAAGTGTAGATTCCTTCTGAATGTTGTAGTCCGAGAGGGTCCGCCCGTCC 19625 Query 104408 TCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCC 104467 || || || ||||||||||| || | | ||| || |||||||| || || || |||||| Sbjct 19626 TCAAGCTGCTTTCCAGCAAAGATCAAGCGCTGCTGGTCAGGAGGGATGCCCTCCTTATCC 19685 Query 104468 TGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTC 104527 || ||||| | || ||||| || | ||||| || || ||||| || ||||| ||| Sbjct 19686 TGGATCTTCGACTTCACATTGTCGATAGTATCAGAAGACTCAACCTCGAGGGTAATGGTC 19745 Query 104528 TTACCAGTAAGTGTTTTTACAAATATCTGCAT 104559 || ||||| || || || || || |||||||| Sbjct 19746 TTGCCAGTGAGAGTCTTGACGAAGATCTGCAT 19777 Score = 122 bits (134), Expect = 2e-22 Identities = 145/197 (74%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 104363 GTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCA 104422 || ||||| |||||||| || ||||| || || || | || || || ||||| || ||| Sbjct 19809 GTGGATTCCTTCTGAATGTTGTAGTCGGAGAGGGTACGGCCATCCTCGAGTTGCTTGCCA 19868 Query 104423 GCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTT 104482 ||||| || || | |||||| ||||| || || || || || ||||||||||| | || Sbjct 19869 GCAAAGATCAGGCGCTGTTGGTCAGGGGGGATACCCTCCTTGTCCTGAATCTTGGACTTG 19928 Query 104483 ACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGTT 104542 || || || | |||||| | || ||||| || || || ||||| || || || || Sbjct 19929 ACGTTGTCAATAGTATCGGAGGACTCAACCTCGAGAGTGATGGTCTTGCCGGTGAGGGTC 19988 Query 104543 TTTACAAATATCTGCAT 104559 ||||| || |||||||| Sbjct 19989 TTTACGAAGATCTGCAT 20005 Score = 107 bits (118), Expect = 4e-18 Identities = 142/197 (72%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 104363 GTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCA 104422 || || || |||||||| || |||||||| | ||| | |||||||| || || || ||| Sbjct 19353 GTGGACTCCTTCTGAATGTTGTAGTCAGACAAAGTCCGGCCGTCTTCCAGCTGCTTGCCA 19412 Query 104423 GCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTT 104482 || ||||| || | || || || || || || || || || ||||||||||| | || Sbjct 19413 GCGAAAATGAGTCGTTGCTGGTCTGGTGGGATGCCCTCCTTGTCCTGAATCTTCGACTTG 19472 Query 104483 ACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGTT 104542 || || || | || || | || ||||| || ||||||||||| || || | || Sbjct 19473 ACGTTGTCAATCGTGTCCGATGACTCAACCTCGAGCGTAATAGTCTTCCCCGTCAAGGTC 19532 Query 104543 TTTACAAATATCTGCAT 104559 || ||||| |||||||| Sbjct 19533 TTCACAAAAATCTGCAT 19549 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1151363245288164