Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Diaporthe_20ampelina_20[genbank_20GCA_5F001006365.1_202015-05-13] 2,383 sequences; 47,325,858 total letters Query= NC_005832.1 Length=106332 Score E Sequences producing significant alignments: (Bits) Value seq1540 93.3 3e-14 >seq1540 Length=209369 Score = 93.3 bits (102), Expect = 3e-14 Identities = 178/259 (69%), Gaps = 14/259 (5%) Strand=Plus/Plus Query 25669 GGGTTCCAGGCGCACACGATGATGCACCTGTCTTCTGGGTTGTCCCTGATAA----GATC 25724 |||||||| |||| || |||||||| || ||| | ||||| ||||| |||| Sbjct 103513 GGGTTCCACGCGCTCATGATGATGCGCCGGTCGTACGGGTTCGTCCTGAGCTTGTGGATC 103572 Query 25725 --CGCGGTGTTTTGCAGCTGATCCACCCCCATCCCCGAGTAGTCTGCCCTCATGTCCGTG 25782 | ||| | ||||| || || ||| |||| |||||| |||||| ||| | Sbjct 103573 ACCTCGGCG------AGCTGGTCGACGCCCTGGCCCGTGTAGTCGGCCCTCGCGTCGACG 103626 Query 25783 TACTCTGCTCCGAAATACCTCCACTGGAACCCGTACACCGGTCCTAGGTCTCCATCTTCC 25842 ||||| || ||||| | | ||||||||||||||| || || || ||||| || || Sbjct 103627 TACTCGGCCCCGAAGTGGCGCCACTGGAACCCGTAGACGGGGCCCAGGTCGCCCGGCTCG 103686 Query 25843 CTGTGCTCAAAGCCCCTC-TTATCCAAAAAGTCTCTGGAACCATTGGCGTCCCAGATCTT 25901 | ||| | ||||| | | || | | | || | || || ||| ||||||||||||| Sbjct 103687 CGGTG-GCCTAGCCCGACGCTGTCGAGATACTCGCGCGAGCCGTTGCCGTCCCAGATCTT 103745 Query 25902 TACCCCCTTCTCGGAGAGC 25920 || |||| ||| |||||| Sbjct 103746 GACGCCCTGCTCCGAGAGC 103764 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 340127721447459