Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Diaporthe_20ampelina_20[genbank_20GCA_5F001006365.1_202015-05-13] 2,383 sequences; 47,325,858 total letters Query= NC_005839.2 Length=131680 Score E Sequences producing significant alignments: (Bits) Value seq1808 86.0 5e-12 >seq1808 Length=99283 Score = 86.0 bits (94), Expect = 5e-12 Identities = 145/210 (69%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 48517 CACTAAATGAAGTGTGCTCTCCTTTTGAATGTTGTAATCAGCCAATTGTCGCTCGTCCTC 48576 ||| || || || ||| |||||| ||||||||||| |||| ||| || |||| || Sbjct 19340 CACCAAGTGCAGCGTGGACTCCTTCTGAATGTTGTAGTCAGACAAAGTCCGGCCGTCTTC 19399 Query 48577 CAGCTGCTTACCGCCGTAAATTAAACGCTGCTGATCCACCGGCACACTTTCCTTGTCCAT 48636 ||||||||| || || |||| | || ||||| || || | | ||||||||| Sbjct 19400 CAGCTGCTTGCCAGCGAAAATGAGTCGTTGCTGGTCTGGTGGGATGCCCTCCTTGTCCTG 19459 Query 48637 AATTTTCTGCTTGATAGACGCTATGGTATCGGTAGACTCCGTCTCGACTGTTATGGTTTT 48696 ||| ||| ||||| | || || || | ||||| ||||| || || || || Sbjct 19460 AATCTTCGACTTGACGTTGTCAATCGTGTCCGATGACTCAACCTCGAGCGTAATAGTCTT 19519 Query 48697 ACCGGTGAGAGTTTTCACAAAAATCTGCAT 48726 || || | || ||||||||||||||||| Sbjct 19520 CCCCGTCAAGGTCTTCACAAAAATCTGCAT 19549 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 421238965680383