Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Diaporthe_20ampelina_20[genbank_20GCA_5F001006365.1_202015-05-13]
2,383 sequences; 47,325,858 total letters
Query= NC_006549.1
Length=140131
Score E
Sequences producing significant alignments: (Bits) Value
seq1562 96.9 3e-15
seq1808 86.0 6e-12
>seq1562
Length=24550
Score = 96.9 bits (106), Expect = 3e-15
Identities = 158/228 (69%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 94781 CCTCCTCTCAATCGCAACACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTC 94840
|| |||| || |||| ||||| ||| | || || ||||| || | ||| || |||
Sbjct 19380 CCACCTCGCAGGCGCAGCACCAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGAG 19439
Query 94841 ATAGTGTTGGAATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGA 94900
| ||| | ||||| ||||| || ||| | ||||| | | ||||| ||||| ||
Sbjct 19440 AGGGTGCGGCCGTCCTCGAGCTGCTTGCCGGCGAAGATCAGGCGCTGCTGGTCTGGGGGG 19499
Query 94901 ATACCTTCTTTGTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACG 94960
|| ||||| ||||| | || || | |||||| | ||| ||||| | || ||
Sbjct 19500 ATGCCTTCCTTGTCCTGGATCTTGGACTTGACATTGTCGATGGTGTCGGAAGACTCCACC 19559
Query 94961 TCAATCGTGATGGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCATG 95008
|||| |||||||| || || || || || ||||| ||||||||||||
Sbjct 19560 TCAAGGGTGATGGTCTTGCCCGTGAGGGTCTTCACGAAGATCTGCATG 19607
>seq1808
Length=99283
Score = 86.0 bits (94), Expect = 6e-12
Identities = 146/212 (69%), Gaps = 0/212 (0%)
Strand=Plus/Plus
Query 94798 CACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGAATCCTC 94857
||||||||||| || || ||||| || | ||| || || || ||| | || ||
Sbjct 19340 CACCAAGTGCAGCGTGGACTCCTTCTGAATGTTGTAGTCAGACAAAGTCCGGCCGTCTTC 19399
Query 94858 CAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTGTCATA 94917
|||||| || || | || || | || |||||| ||||| || || || || ||||| |
Sbjct 19400 CAGCTGCTTGCCAGCGAAAATGAGTCGTTGCTGGTCTGGTGGGATGCCCTCCTTGTCCTG 19459
Query 94918 AATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATGGTTTT 94977
||| || | ||||||| | | | ||||| | || || || | ||| || || ||
Sbjct 19460 AATCTTCGACTTGACGTTGTCAATCGTGTCCGATGACTCAACCTCGAGCGTAATAGTCTT 19519
Query 94978 TCCAGTAAGAGTTTTCACAAAGATCTGCATGC 95009
|| || | || |||||||| ||||||||||
Sbjct 19520 CCCCGTCAAGGTCTTCACAAAAATCTGCATGC 19551
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 448277846525880
| Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |