Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Diaporthe_20ampelina_20[genbank_20GCA_5F001006365.1_202015-05-13] 2,383 sequences; 47,325,858 total letters Query= NC_007151.1 Length=149622 Score E Sequences producing significant alignments: (Bits) Value seq1963 98.7 1e-15 >seq1963 Length=539952 Score = 98.7 bits (108), Expect = 1e-15 Identities = 415/646 (64%), Gaps = 17/646 (3%) Strand=Plus/Plus Query 148250 CTCGTAATTTTCGTAAAGGTCCTCGAATTCTTGGCCATAGCAATCGTTTAAACCGGGACA 148309 |||||| || ||||| || |||| || || | || ||||| ||| | || || || Sbjct 429991 CTCGTACTTCTCGTAGAGAGCCTCAAACTCCTCACCGTAGCAGTCGGCAAGTCCAGGGCA 430050 Query 148310 CTCGTCGGGGCACATCAATGACCATTTCCC-TCCTGTCTTTACCCTCTTCATAAACAGAT 148368 ||| | ||||||||| | | ||| | || | || ||| |||| |||||| ||||||| Sbjct 430051 CTCATTGGGGCACATGAGGGTCCACTCGCCGTTCT-TCTCGACCCGCTTCATGAACAGAT 430109 Query 148369 CAGGTGTCCACATGGCAAAAAGAAGATCGCGAGCCTTCATATCCTCGGCACCCA---TAT 148425 | || |||| | |||| | |||||| || || || ||||| || | | Sbjct 430110 CGGGGATCCAGAGTGCAAGGAAAAGATCACGGGCTCGGATCTCCTCCTTGCCGTGGTTCT 430169 Query 148426 TGCGCTTTAGATCCaaaaaagtaaaaaCGTCTGCGTGCCAAGGCTCGATGTATACGGTCA 148485 ||||| || || | ||| || |||||||||||||| ||||| | ||| | | | Sbjct 430170 TGCGC---AGGTCAAGAAACTCGAAGACGTCTGCGTGCCATGGCTCAAGGTAGATAGCGA 430226 Query 148486 TGGCGCCTTTCC---TTTTACCTCCTTGATCGACATGGCGTAGCA-TGCTATTAAAAACA 148541 ||| || | | || || || || ||||||| || ||| | | ||||| || Sbjct 430227 AGGCACCGGGACGCTTGTTGCCGCCCTGGTCGACATATCGG-GCAGTATTGTTAAAGACC 430285 Query 148542 CGCAA--TGCAGGTCCCAATCCCGCCGCAGTTCCGTTTGTGGATTCAATTTTACTATTGG 148599 ||||| || ||| | || | ||| ||||| || | || | || Sbjct 430286 CGCAACATGGGGGTG--ATGCCATTGGAAGTGCCGTTAGTACCAGCGATGTATGAGCCGG 430343 Query 148600 TGGCGCGAATTTGAGTGACATTCAGGCCGATGCCGCCTCCGTGTTTAGATATCATGGCAC 148659 |||| || || | ||| || |||||||| || || | || || |||||||||| Sbjct 430344 TGGCACGGATACGGTGGACGTTGAGGCCGATACCTCCCGCCATCTTGGAGATCATGGCAC 430403 Query 148660 AATCGTTGAGTGTTTTATAGATGCCGTTAATACTGTCCTCTTGAATGTTAAGCAGGTAGC 148719 | ||||| || | |||||||| | ||| |||||||| | || | | ||| ||| Sbjct 430404 AGGTCTTGAGCGTGTCGTAGATGCCCTCAATGCTGTCCTCCTTCATATCGACGAGGAAGC 430463 Query 148720 ACGATGACATTTGAGGCATTTTCATGCCAGACGAAAATAGAGTTGGACTAGCGTGAGTGA 148779 ||||||||| || ||| |||||| |||| || || ||||| |||| Sbjct 430464 ACGATGACAGCTGGGGCTGGGGAGTGCCAGCATTGAATAATGTGGGCGAGGCGTGGGTGA 430523 Query 148780 ACAGCTTTGCCCGCATCAATCTATAGGATTCGATAGCGCTTTCGATGTCATCACCATGAA 148839 | | ||| ||||| | || | ||||| | || |||| |||||| || | Sbjct 430524 AGAACTTGTTGGACATCAGGTTGTACGTCTCGATGACTCTCTCGACGTCATCTCCCCAGA 430583 Query 148840 TCTGTAGAGCTACACGCATCAGCATGTGTTGAGGCCTCTCGACGAC 148885 | | ||| |||||||| | ||||||||| |||| ||||||||| Sbjct 430584 TGCCGACAGCGACACGCATGATCATGTGTTGTGGCCGCTCGACGAC 430629 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 478648141843760