Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Diaporthe_20ampelina_20[genbank_20GCA_5F001006365.1_202015-05-13] 2,383 sequences; 47,325,858 total letters Query= NC_007346.1 Length=407339 Score E Sequences producing significant alignments: (Bits) Value seq1963 334 2e-86 >seq1963 Length=539952 Score = 334 bits (370), Expect = 2e-86 Identities = 1065/1628 (65%), Gaps = 30/1628 (2%) Strand=Plus/Minus Query 363547 TTCACGCACGCCACGCCAACAATGTACAATGCTGGAACTCGTAATCCACAGATGTCTTCT 363606 ||||| |||||| |||| ||| | | ||||||||| |||| | || ||| |||| || Sbjct 430524 TTCACCCACGCCTCGCCCACATTATTCAATGCTGGCACTCCCCAGCCCCAGCTGTCATCG 430465 Query 363607 TGCTTTCTTCTAAAAATGAAGGACGATTCCATCGAGGGTATCTTTGACACACTTAAGAAT 363666 ||||| || | | |||||||| || ||| ||||| |||| ||||| || |||| Sbjct 430464 TGCTTCCTCGTCGATATGAAGGAGGACAGCATTGAGGGCATCTACGACACGCTCAAGACC 430405 Query 363667 TGTGCTCTTATTTCCAAGAATGCAGGCGGAATTGGTGT-ATCGATCCACAATGTTCGTGC 363725 ||||| | || ||||||| || || || || || | | || ||||| | | ||||| Sbjct 430404 TGTGCCATGATCTCCAAGATGGCGGGAGGTATCGGCCTCAACG-TCCACCGTATCCGTGC 430346 Query 363726 -ACAGAACAGTTACATTCGC-GGCACAGGGGGATACTCGAATGGGCTGGTTCCCATGCTT 363783 || | | ||||| ||| || || || || ||||| | |||||| | Sbjct 430345 CACCGG-CTCATACAT-CGCTGGTACTAACGGCACTTCCAATGGCATCACCCCCATGTTG 430288 Query 363784 CGTGTGTTTGACAATACTGCGAGGTACGTCGACCAGGGTGGAGGAAAGCGCAAAGGGGCG 363843 || || ||| |||||||||| | || ||||||||||| || ||||| || || Sbjct 430287 CGGGTCTTTAACAATACTGCCCGATATGTCGACCAGGGCGGCAACAAGCGTCCCGGTGCC 430228 Query 363844 TTTGCTATGTATCTCGAGCCTCATCATGCCGATATTTTTGAGTTTCTTGAGCTCCGGAAA 363903 || ||||| || || ||||| || || || | || ||||||||||| || || || Sbjct 430227 TTCGCTATCTACCTTGAGCCATGGCACGCAGACGTCTTCGAGTTTCTTGACCTGCGCAAG 430168 Query 363904 AACACGGGAAAAGAGGAATTGCGTGCACGTGATCTGTTCTATGCACTTTGGGTTTCTGAC 363963 ||| || || ||||| | || || |||||||| ||| |||||| ||| | | || Sbjct 430167 AACCACGGCAAGGAGGAGATCCGAGCCCGTGATCTTTTCCTTGCACTCTGGATCCCCGAT 430108 Query 363964 CATTTTATGAAGCGCGTGGAGGCAGGTAAG--AATTGGTCACTCTTTTGCCCACACGAAT 364021 | || |||||||| || ||| | | | | | ||| | ||| | ||||| | || | Sbjct 430107 CTGTTCATGAAGCGGGTCGAG--AAGAACGGCGAGTGGACCCTCATGTGCCCCAATGAGT 430050 Query 364022 GTCCAGGTCTTTCCGATGTATGGGGTGACGACTATGTTGCTCTATACGAAAAGTATGAAT 364081 | || || ||| |||| | ||||| || | || ||||| ||||| ||||| || Sbjct 430049 GCCCTGGACTTGCCGACTGCTACGGTGAGGAGTTTGAGGCTCTCTACGAGAAGTACGAGA 429990 Query 364082 CGGAGGGAAAGGCTCGTAAGACAATTCCCGCACAGAAGCTATGGTTTGCCATCATGGATT 364141 |||||| | ||| ||||| || || |||||| | |||| |||||| | || Sbjct 429989 AGGAGGGCCGCGGTCGCAAGACCATGAAGGCCCAGAAGTTGTGGTACGCCATCCTCGAGG 429930 Query 364142 CGCAGATTGAGACAGGAACACCCTATATGTTGTACAAAGA-TTCGTGCAACCGCAAGTCC 364200 | |||| ||||| || | |||| ||| | |||||||| || | ||||| ||| | Sbjct 429929 CTCAGACCGAGACTGGCAACCCCTTCATGCTATACAAAGACCACGCG-AACCGAAAGAGC 429871 Query 364201 AACCAGCAGCACCTTGGTACAATTCAGCAGAGC-AACCTATGTACCGAGATTATTGAATA 364259 |||||| | |||| ||||| | || |||| | ||||| || || ||||| || || || Sbjct 429870 AACCAGAAAAACCTGGGTACCA-TCCGCAGCTCAAACCTCTGCACTGAGATCATCGAGTA 429812 Query 364260 CACCGCTCCCGACGAGACTGCCGTATGTAACCTTGCGTCGATCGCGCTTCCGGCGTTTGT 364319 | || || || ||| || || || ||||| || || || || || ||||||| || Sbjct 429811 CTGTGCCCCTGATGAGGTCGCTGTTTGCAACCTGGCCTCTATTGCCCTGCCGGCGTACGT 429752 Query 364320 AAAAGATG----GTACT--TTTGACCACCAGCATCTTTATGACGTAACCTA--TCATGCT 364371 | ||| ||| | || ||| || | |||| || ||| | || | | Sbjct 429751 GGACTATGACAACAACTGCTACAACTTCCAACAGTTGCATGAGGTTACCCAGGTCGTCGT 429692 Query 364372 ACTTGCAATCTCGACAAGGTTATCGACAAGAATTATTATCCAATTCCTGAAGCCGAGCGT 364431 | |||| || ||||| | || || || | || ||| | || ||| | Sbjct 429691 CC--GCAACCTGAACAAGATCATTGATGTCAACCACTACCCAGTCAAGGAGGCCTACAAC 429634 Query 364432 TCTAATATGCGTCATCGCCCGATTGGTCTTGGTGTACAGGGCCTCGCTGACGTTTTTATG 364491 || ||||| ||||| ||||||||| ||||||| ||||| || ||||| | || || Sbjct 429633 AGCAACATGCGACATCGACCGATTGGTGTTGGTGTCCAGGGTCTTGCTGATGCGTTCTTG 429574 Query 364492 ATGCTCAAGATGGCATTTGATTCGCCTGACGCTCGTGTTCTAAATAAGGAGATCTTTGAA 364551 || ||| | || || || || || || |||| || || ||| ||||||| || Sbjct 429573 GCCCTTCGTATGCCTTTCGACTCCCCCGAGGCCCGTGAGCTGAACAAGCAGATCTTCGAG 429514 Query 364552 ACAATGTATTTTGCCGCAATGACTGCTTCGTGTGATTTGGCAAAAACCAAGGGAAAGTAC 364611 || || || || || | || || || | ||| | || || |||| |||| Sbjct 429513 ACTATCTACCACGCTGCTCTTACCGCATCAAGCGATATTGCCAAGGTGGAGGGCCCGTAC 429454 Query 364612 TCTACTTATGAGGG--GTCCCCTCTTTCGCAGGGAAAATTCCAGTTTGATCTATGGAATG 364669 || || ||||| |||| || || ||||| | | ||||| || | ||||||| Sbjct 429453 AAGACGTACGAGGGCAGTCCGGTC--TCACAGGGCATCCTTCAGTTCGACATGTGGAATG 429396 Query 364670 TCACGCCATCTGTCCGATGGAACTGGGATACGCTACGTTCCAACGTTAAGAAGCATGGTA 364729 ||| |||||| | | ||| ||||||| | || ||| | ||| || ||| Sbjct 429395 TCAAGCCATCCGCGCTCTGGGACTGGGAAGCCCTCAAGGACAAGATCAAGGAGACCGGTG 429336 Query 364730 CTCGCAACTCCCTCGTTAC-AGCGCCCATGCCCACGGCTTCTACTGCACAGATCCTCGGA 364788 |||||| || ||||| ||||| |||||||| || || || | |||||||| || Sbjct 429335 TCCGCAAC-AGCTTGTTACTGGCGCCAATGCCCACTGCATCCACCTCGCAGATCCTGGGC 429277 Query 364789 AACAACGAGTGCTTCGAACCGTTTACAAGCAATCTTTATTCACGCCGGGTTCTTTCCGGA 364848 ||||||||||||||||| || | || ||| | || || || || || | || Sbjct 429276 AACAACGAGTGCTTCGAGCCATACACCTCCAACATCTACCAGCGACGTGTGCTCGCTGGC 429217 Query 364849 GAATTTCCGGTAGTTAATAAGTACCTAGTCAAGGATCTTTCCGACCGCGGGCTGTGGGGT 364908 || || | ||| || || | || ||| ||| | | || | ||| ||||| | Sbjct 429216 GAGTTCCAGGTTGTCAACCCTTGGCTTCTCAGGGACTTGACAGAGCTCGGCTTGTGGTCT 429157 Query 364909 GACAGCATGAAGAACTATATCATCGCCGCTAATGGTTCTGTGCAGAACATTCCAGGATTT 364968 || |||||||||| ||||||||||| ||||||| | ||||||||||| | | Sbjct 429156 GAGGCCATGAAGAACCGTATCATCGCCGAGGATGGTTCCATACAGAACATTCCCAGCATC 429097 Query 364969 CCAGAAGATCTGAAGCCTATTTACAAAACCGTATGGGAAATTTCCATGCGAACTCTCATT 365028 || | || | ||| | | ||||| ||||| |||||||| || | | ||| | | Sbjct 429096 CCGGCTGACATCAAGGCCCTGTACAAGACCGTTTGGGAAATCTCTCAGAGGACTATTGTG 429037 Query 365029 GATATGGCGGCCGATCGCGGTGCTTTTATCTGTCAGAGCCAGTCGTTTAACGTATTCATG 365088 | ||||| || || || ||||| || ||| ||| |||||| | ||| | |||| Sbjct 429036 CAGATGGCTGCTGACCGTGGTGCATTCATCGACCAGTCCCAGTCACTCAACATCCACATG 428977 Query 365089 ACTCAGCCAACCTCCGCCAAGCTTACATCCATGCATTTCTACGGGTGGAAATCCGGTCTT 365148 |||| || | |||| | || |||||||||| ||| ||||| ||| || Sbjct 428976 CGAGAGCCGTCCATGGGCAAGATCACCAGCATGCATTTCGCCGGCTGGAAGCTCGGCCTC 428917 Query 365149 AAGACAGG 365156 ||||| || Sbjct 428916 AAGACTGG 428909 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1303313805763506