Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Diaporthe_20ampelina_20[genbank_20GCA_5F001006365.1_202015-05-13] 2,383 sequences; 47,325,858 total letters Query= NC_007383.1 Length=134394 Score E Sequences producing significant alignments: (Bits) Value seq1808 82.4 7e-11 >seq1808 Length=99283 Score = 82.4 bits (90), Expect = 7e-11 Identities = 140/203 (69%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 23991 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAAC 24050 ||||| | || ||||| || | || || || | || || |||| || ||| || | Sbjct 20005 ATGCAGATCTTCGTAAAGACCCTCACCGGCAAGACCATCACTCTCGAGGTTGAGTCCTCC 19946 Query 24051 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCAA 24110 || || || || | ||||| |||||| ||||| || || || || || || ||| Sbjct 19945 GATACTATTGACAACGTCAAGTCCAAGATTCAGGACAAGGAGGGTATCCCCCCTGACCAA 19886 Query 24111 CAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTATAAC 24170 ||| | ||||| | | |||||||||||||| |||| | | | | || ||| || ||| Sbjct 19885 CAGCGCCTGATCTTTGCTGGCAAGCAACTCGAGGATGGCCGTACCCTCTCCGACTACAAC 19826 Query 24171 ATTCAAAAAGAATCTACAATTCA 24193 ||||| || ||||| || |||| Sbjct 19825 ATTCAGAAGGAATCCACCCTTCA 19803 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 429923513449365