Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Diaporthe_20ampelina_20[genbank_20GCA_5F001006365.1_202015-05-13] 2,383 sequences; 47,325,858 total letters Query= NC_009899.1 Length=344691 Score E Sequences producing significant alignments: (Bits) Value seq1786 131 4e-25 >seq1786 Length=271448 Score = 131 bits (144), Expect = 4e-25 Identities = 173/238 (73%), Gaps = 4/238 (2%) Strand=Plus/Plus Query 243502 ATCATCACAGAAGCAGTTGAAAACGAAAAGGAATTCATTTG--CGACGCTATTCCATGCC 243559 |||||||| || || || | | ||| |||||||| |||| ||| ||| | ||||| Sbjct 165531 ATCATCACCGAGGCTGTCGCCATCGAGAAGGAATT--TTTGACCGAGGCTCTGCCATGTG 165588 Query 243560 GGCTTATTGGCATGAACTCTGAACTCATGGGACAGTACATCGAATTCGTAGCCGACCGCA 243619 || | |||||||||||| | |||||| |||||||||||||| || ||||||||| Sbjct 165589 CCCTCCTCGGCATGAACTCTAACCTCATGAAGCAGTACATCGAATTTGTCGCCGACCGCC 165648 Query 243620 TTTTCATCGCGCTTGGTTATGAGAAAGTGTACAACTCCAAGAACCCCTTTGCCTTTATGG 243679 | | |||| || || | || || || ||||| || |||||||| | ||| |||| Sbjct 165649 TCCTGGTCGCCCTGGGCAACGACAAGGTTTACAAGTCGTCCAACCCCTTCGACTTCATGG 165708 Query 243680 AGCTCATTTCGCTTCAAGGGAAAACTAACTTCTTCGAAAAGCGTGTCAGTGATTATCA 243737 || ||| || || || || || ||||||||||| ||||||||| |||| || || Sbjct 165709 AGAACATCTCCCTCGGTGGCAAGACCAACTTCTTCGAGAAGCGTGTCGGTGACTACCA 165766 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1102846326661050