Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Diaporthe_20ampelina_20[genbank_20GCA_5F001006365.1_202015-05-13] 2,383 sequences; 47,325,858 total letters Query= NC_010191.2 Length=186713 Score E Sequences producing significant alignments: (Bits) Value seq1963 233 2e-56 >seq1963 Length=539952 Score = 233 bits (258), Expect = 2e-56 Identities = 1158/1816 (64%), Gaps = 51/1816 (3%) Strand=Plus/Plus Query 113565 TGAACTGAATGGGTCTCGCCTTGGCCTTTGATCGGAGGTAGTACATCCCCGTCTTGAGCC 113624 |||| ||||||||| || |||| | |||||||||||||| || |||||||| | Sbjct 428862 TGAATTGAATGGGTGCGGCAGCTGCCTGAGTGCGGAGGTAGTACATGCCAGTCTTGAGGC 428921 Query 113625 CCTGCTTCCAGGCATACATATGCATCGAGGACAACTTGGAGAGTGTTGGACTTTC-CATG 113683 | |||||||| | | |||||| || | |||| | | || || || |||| Sbjct 428922 CGAGCTTCCAGCCGGCGAAATGCATGCTGGTGATCTTGCCCATGGACGG-CTCTCGCATG 428980 Query 113684 AAGAGGTTCATACTTTGGGATTGATCGATGAAGCGTCCACGATCCGCCGCCATATCAATC 113743 || ||| | ||||| || |||||||| ||||| || || ||||| | | Sbjct 428981 TGGATGTTGAGTGACTGGGACTGGTCGATGAATGCACCACGGTCAGCAGCCATCTG---C 429037 Query 113744 ACATCCTTCATCTT---GATTTCCCACACAGTTCTGTAGAGGTTCTTAATATCATCTGGG 113800 ||| || ||| ||||||||| || || |||| ||| ||| || ||| | ||| Sbjct 429038 ACAATAGTCCTCTGAGAGATTTCCCAAACGGTCTTGTACAGGGCCTTGATGTCAGCCGGG 429097 Query 113801 ATATCCACGATATTTTGGATGGAGCCACCCGCCTTGACCATGAGATCCTTCATATCCTTT 113860 || || || || ||||| ||| || | || || | | |||||| ||| Sbjct 429098 ATGCTGGGAATGTTCTGTATGGAACCATCCTCGGCGATGATACGGTTCTTCATGGCCTCA 429157 Query 113861 GACCAGAGACCAATCTTTTTGAGATCCTCCACGAGATGCTTA---TTGACAACAACAAAC 113917 ||||| | || | || | | | ||| |||| || | |||||||| ||| Sbjct 429158 GACCACAAGCCGAGCTCTGTCAAGTCCCT---GAGAAGCCAAGGGTTGACAACCTGGAAC 429214 Query 113918 TCACCCGCGAGGGTGCGTCTCAGATAGATATTGGTCGTGTATGGCTCAAAGCACTCATTG 113977 || || ||||| |||| | | ||||| |||| ||||||||||| |||||||| ||| Sbjct 429215 TCGCCAGCGAGCACACGTCGCTGGTAGATGTTGGAGGTGTATGGCTCGAAGCACTCGTTG 429274 Query 113978 TTACCCAAGATTTGGGCGGTGGAGGCTGTGGGCATGGGTGCCATGAGAAGGCTGTTACGG 114037 || |||| ||| || | |||||| || |||||||| || |||| | | |||||| ||| Sbjct 429275 TTGCCCAGGATCTGCGAGGTGGATGCAGTGGGCATTGGCGCCAGTAACAAGCTGTTGCGG 429334 Query 114038 AGACCCTTTTCCCTAATGCGTTCCTTGAGGGCGTCCCAGTCGTAGTTGAGC-TTTGTCTC 114096 | ||| | ||| | || ||||||||||| |||||||| || | || || || Sbjct 429335 ACACCGGTCTCCTTGATCTTGTCCTTGAGGGCTTCCCAGTCCCAG-AGCGCGGATGGCTT 429393 Query 114097 CCCCTGCCACATATCAAACTGGAGGATACCTTGGGAGGCTGGCGATCCCTCAAATGTCTC 114156 | | |||||| || ||||| ||||| || || ||| | || ||||| | |||| Sbjct 429394 GACATTCCACATGTCGAACTGAAGGATGCCCTGTGAGACCGGACTGCCCTCGTACGTCTT 429453 Query 114157 GTATGGGCCCTCAACCTCCGCCAATTCGGAGCTCGCCTCG---AGGGCTGCGTGATACAT 114213 ||| |||||||| |||| || | || ||| | || || || ||||| || || Sbjct 429454 GTACGGGCCCTCCACCTTGGCAATATC---GCTTGATGCGGTAAGAGCAGCGTGGTAGAT 429510 Query 114214 TGTCTCAAAAATGCGAGCATTCATTGCCTTGGCCTCGTCGGAATCAAACGCGAGTCG--G 114271 ||||| || || | |||| | ||||||| ||| || || | | || | Sbjct 429511 AGTCTCGAAGATCTGCTTGTTCAGCTCACGGGCCTCGGGGGAGTCGAAAGGCATACGAAG 429570 Query 114272 CACAAAATAAATACATCCGCGAGACCTTGGACACCGAGGCCAATTGGGCGATGTCTCATA 114331 | || || |||| || ||||| |||||||| | ||||| || ||||||| ||| Sbjct 429571 GGCCAA--GAACGCATCAGCAAGACCCTGGACACCAACACCAATCGGTCGATGTCGCATG 429628 Query 114332 TTAGACTTTCGAGCGGTCTCC---ACGGGATAAAAATTCCTATCGATAACCCTATTTAGA 114388 || || | | || |||| || || || || ||| || | | | || || Sbjct 429629 TT--GCTGTTG-TAGGCCTCCTTGACTGGGTAGTGGTTGACATCAATGATCTTGTTCAGG 429685 Query 114389 TTTTTGGTGACAACCTTTGTGATTTCATGAAGCTTTTCGTAATCAAAACTGCGAGTCTCT 114448 || | ||| |||| || | ||||| | || || | | | | | | | || Sbjct 429686 TTGCGGACGACGACCTGGGTAACCTCATGCAACTGTTGGAAGTTGTAGCAGTTGTTGTCA 429745 Query 114449 TCATTGACATACTTAGGAAGGGCGATTGACGCCAGATTACACACAGAGGTCTCATCCTTA 114508 | | || ||| || ||||| || || ||||| || || |||| | |||||| Sbjct 429746 TAGTCCACGTACGCCGGCAGGGCAATAGAGGCCAGGTTGCAAACAGCGACCTCATCAGGG 429805 Query 114509 TCAGTGTACTCTATAATTTCCGTACACAAATTTGAACTCTTAATGGTGCCCAAGTTCTTT 114568 || |||||| || || || || || | ||||| || ||||| |||| ||| || Sbjct 429806 GCACAGTACTCGATGATCTCAGTGCAGAGGTTTGAGCTGCGGATGGTACCCAGGTTTTTC 429865 Query 114569 TGATTTGACTTTGTGTTACACG-CATCCTTGTAAAGCATGTATGGCGTCCCCGTCTCCGT 114627 || || |||| ||| | || || ||||| |||||| | || | || ||||| || Sbjct 429866 TGGTTGCTCTTTCGGTT-CGCGTGGTCTTTGTATAGCATGAAGGGGTTGCCAGTCTCGGT 429924 Query 114628 TTGGGACTTGAGAATAGCCTTCCA-GACATCGGCGGCTGGCACAGTGGCGTTG---GCTC 114683 || | || ||| || || | ||| || || | ||| || ||| ||| | | Sbjct 429925 CTGAGCCTCGAGGATGGCGTACCACAACTTCTG-GGCCTTCA---TGGTCTTGCGACCGC 429980 Query 114684 GCCCCTCCTCCTCGTACTTTGTGTAGAGGGCTTCAAACTCTTCACCCACGGCCTCTGAGA 114743 | ||||||| ||||||||| |||||| || |||||||| ||||| | || | | Sbjct 429981 GGCCCTCCTTCTCGTACTTCTCGTAGAGAGCCTCAAACTCCTCACCGTAGCAGTCGGCAA 430040 Query 114744 GCCCTGGTGCCTTATCTGGGCAGAAGAGAGACCATTGACCACCCTCCTCAACACGCTTCA 114803 | || || || || ||||| | ||| | ||| | || || ||| || ||||||| Sbjct 430041 GTCCAGGGCACTCATTGGGGCACATGAGGGTCCACTCGCCGTTCTTCTCGACCCGCTTCA 430100 Query 114804 TGAAGAGGTCTGGGATCCAGAGAGCTGAGAAGAGATCCCGACAGCGAGCTTCTTCATCCC 114863 |||| || || ||||||||||| || ||| ||||| || || || || | | Sbjct 430101 TGAACAGATCGGGGATCCAGAGTGCAAGGAAAAGATCACGGGCTCGGATCTCCTCCTTGC 430160 Query 114864 CCTGATTGAGACGCAACTCCAAAAAGTCCATGATATCCGCGTGCCACGGTTCCAGGTACA 114923 | || || |||| || | ||| || | || || |||||||| || || ||||| | Sbjct 430161 CGTGGTTCTTGCGCAGGTCAAGAAACTCGAAGACGTCTGCGTGCCATGGCTCAAGGTAGA 430220 Query 114924 CCGCGATTGACCCCTTACG---ACGACCAGCCTGGTTTACATACCTCGCTGTGGCATTAA 114980 |||| | || ||| || |||||| ||||| | || || |||| Sbjct 430221 TAGCGAAGGCACCGGGACGCTTGTTGCCGCCCTGGTCGACATATCGGGCAGTATTGTTAA 430280 Query 114981 ATACGCGAAGCATTGGAATGATACCATCAGATTGGCCATTTGT-CCCCCGA-ATACGAGA 115038 | || || | ||| || |||| |||| || ||| || || || ||| || ||| Sbjct 430281 AGACCCGCAACATGGGGGTGATGCCATTGGAAGTGCCGTTAGTACCAGCGATGTATGAGC 430340 Query 115039 CTTATTGGCTCTGACATCATGGATGTGCATACCAATACCCCCTGCCCACTTTGAGATTTG 115098 | |||| | || | |||| || | || ||||| || ||| ||| ||||| Sbjct 430341 C--GGTGGCACGGATACGGTGGACGTTGAGGCCGATACCTCCCGCCATCTTGGAGATCAT 430398 Query 115099 CGCGCACTCCGTGAGACTGCCGTAGATCCCGTCGATCGAGTCACCCTTATTTGCGATAAG 115158 || || | |||| || ||||||| || || || ||| |||| | ||| || Sbjct 430399 GGCACAGGTCTTGAGCGTGTCGTAGATGCCCTCAATGCTGTCCTCCTTCATATCGACGAG 430458 Query 115159 GAAGCAGCTCGACATTTGTGGCCTTGGTGTACCAGCGTTGAAGAGGGTTGGTGTCGCGTG 115218 |||||| |||| || ||| || || ||||| ||||| | || || | ||||| Sbjct 430459 GAAGCACGATGACAGCTGGGGCTGGGGAGTGCCAGCATTGAATAATGTGGGCGAGGCGTG 430518 Query 115219 GATGAACATACCT-TGGGACATCTTATCGTAGGTCTCCAAGACGGCGGGAATGTCTTCCC 115277 | |||| | || | | ||||||| | ||| ||||| | ||| | ||| || | Sbjct 430519 GGTGAAGA-ACTTGTTGGACATCAGGTTGTACGTCTCGATGACTCTCTCGACGTCATCTC 430577 Query 115278 CGTGAATACCGATCGAGACCCGCATAAACATGTATTGGGGTGTTTCCATCAGGATACCAT 115337 | || |||| | ||| ||||| | ||||| ||| || || | | |||| | Sbjct 430578 CCCAGATGCCGACAGCGACACGCATGATCATGTGTTGTGGCCGCTCGACGACTTTACCGT 430637 Query 115338 CGAGCCTCTGGAGGTA 115353 ||||| || | ||||| Sbjct 430638 CGAGCTTCAGCAGGTA 430653 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 597335806329640