Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Diaporthe_20ampelina_20[genbank_20GCA_5F001006365.1_202015-05-13] 2,383 sequences; 47,325,858 total letters Query= NC_011183.1 Length=154641 Score E Sequences producing significant alignments: (Bits) Value seq1963 253 2e-62 >seq1963 Length=539952 Score = 253 bits (280), Expect = 2e-62 Identities = 944/1473 (64%), Gaps = 30/1473 (2%) Strand=Plus/Minus Query 93907 TTCAACGCGGGGACCCCGGTGCCACAGATGTCTTCGTGTTTCCTGATGACGAACAAGGCC 93966 ||||| || || || || ||| ||| |||| ||||| ||||| | | |||| Sbjct 430500 TTCAATGCTGGCACTCCCCAGCCCCAGCTGTCATCGTGCTTCCTCGTCGATATGAAGGAG 430441 Query 93967 GACTCCATCTCCGGAATTTTCGACAGCCTCAAGGACTGTGCGACCATCTCAAAATACGCG 94026 ||| ||| || || | ||||| |||||| |||||| | ||||| || ||| Sbjct 430440 GACAGCATTGAGGGCATCTACGACACGCTCAAGACCTGTGCCATGATCTCCAAGATGGCG 430381 Query 94027 GGGGGAATCGGGATCAGTGTCCACGACGTA--CGTGCCAGGGGTTCCTACATCCGCGGTA 94084 || || ||||| ||| |||||| |||| ||||||| || || |||||| |||| Sbjct 430380 GGAGGTATCGGCCTCAACGTCCAC--CGTATCCGTGCCACCGGCTCATACATCGCTGGTA 430323 Query 94085 CCAATGGCACCTCCAACGGCCTCGTCCCTATGCTCCGGGTCTTCAACAACGCGGCGCGCT 94144 | || ||||| ||||| ||| || ||| ||| | |||||||| ||||| | || || | Sbjct 430322 CTAACGGCACTTCCAATGGCATCACCCCCATGTTGCGGGTCTTTAACAATACTGCCCGAT 430263 Query 94145 ACGTGGACCAGGGTGGTGGGAGGAGGAAGGGTTCTTTCGCGGTCTATCTCGAGCCCTGGC 94204 | || |||||||| || | | | ||| | ||||| |||| || ||||| |||| Sbjct 430262 ATGTCGACCAGGGCGGCAACAAGCGTCCCGGTGCCTTCGCTATCTACCTTGAGCCATGGC 430203 Query 94205 ACGCGGACGTGCAGGCTTTCATCGACCTGCGAAAGAACCACGGCAACGATCTGGAGA--- 94261 |||| ||||| | || | |||||||| |||||||||||||| || ||||| Sbjct 430202 ACGCAGACGTCTTCGAGTTTCTTGACCTGCGCAAGAACCACGGCAAGGA---GGAGATCC 430146 Query 94262 GGGCCAGAGACCTCTTCTACGCTCTCTGGGTGCCAGACCTTTTTATGAAACGCGTCGAGA 94321 | ||| | || || ||| || |||||| | || || || || ||||| || ||||||| Sbjct 430145 GAGCCCGTGATCTTTTCCTTGCACTCTGGATCCCCGATCTGTTCATGAAGCGGGTCGAGA 430086 Query 94322 AAAACTCCGCCTGGAGTCTTTTTTGTCCCAATGAATGTCCCGGACTGTCCGACGTTTGTG 94381 | ||| || |||| || | || |||||||| || || ||||| ||||| | | Sbjct 430085 AGAACGGCGAGTGGACCCTCATGTGCCCCAATGAGTGCCCTGGACTTGCCGACTGCTACG 430026 Query 94382 GATCGCGTTTTGAAGACTTGTATGCTCGTTACGAATCGCAGGGCAAGGCCAGGAAGGTTA 94441 | | ||||| | | || | ||||| | ||||| | | ||| | Sbjct 430025 GTGAGGAGTTTGAGGCTCTCTACGAGAAGTACGAGAAGGAGGGCCGCGGTCGCAAGACCA 429966 Query 94442 TGGATGCTAGGAAGCTGTGGGATCAGATCGTGGACGTACAGGTGGAGACGGGTACGCCCT 94501 || | || |||| ||||| | ||| | || | ||| ||||| || | |||| Sbjct 429965 TGAAGGCCCAGAAGTTGTGGTACGCCATCCTCGAGGCTCAGACCGAGACTGGCAACCCCT 429906 Query 94502 ACATCTTGTTCAAGGACTCTGTCAACGCCAAGTCCAACCAGCAGCACCTCGGGGTGATCA 94561 ||| | | ||| ||| | ||| ||| ||||||| | |||| || ||| Sbjct 429905 TCATGCTATACAAAGACCACGCGAACCGAAAGAGCAACCAGAAAAACCTGGGTACCATCC 429846 Query 94562 AGAGCTCGAATCTGTGCACCGAGATTGTCGAGTATACTTCTCCGGACGAGATTGCTGTGT 94621 ||||| || || ||||| ||||| ||||||| | | || || ||| | ||||| | Sbjct 429845 GCAGCTCAAACCTCTGCACTGAGATCATCGAGTACTGTGCCCCTGATGAGGTCGCTGTTT 429786 Query 94622 GTAACCTGGGCTCCATCAACCTGTCCACTTTCGTGCGAGATGCCTAC-ACGTCTACTGCT 94680 | ||||||| ||| || |||| | | | |||| ||| | || || |||| || Sbjct 429785 GCAACCTGGCCTCTATTGCCCTGCCGGCGTACGTGGACTATGACAACAACTGCTACAACT 429726 Query 94681 TCGTTCGATCTGGAGGAGCTTGTGAACTTCGCGGGAAGGATGGTCTTGAACCTGAACAGG 94740 || | | || | ||| || | ||| | ||| |||||||||| | Sbjct 429725 TCCAAC-AGTTGCATGAGGTTACCCAGGTCG---------TCGTCCGCAACCTGAACAAG 429676 Query 94741 GTAATCGACAAGAACTTCTACCCCGTCCCGGAGGCGGAGAACTCAAACCTGAAGCATCGG 94800 | || || ||| |||||| ||| |||||| | ||| ||| || ||||| Sbjct 429675 ATCATTGATGTCAACCACTACCCAGTCAAGGAGGCCTACAACAGCAACATGCGACATCGA 429616 Query 94801 CCCATCGGCATCGGCGTCCAGGGTTTCGCGGACGCGCTGGTGATGATGCGTCTGCCCTAC 94860 || || || | || ||||||||| | || || ||| | || | ||| |||| | | Sbjct 429615 CCGATTGGTGTTGGTGTCCAGGGTCTTGCTGATGCGTTCTTGGCCCTTCGTATGCCTTTC 429556 Query 94861 GACTCTGTCGACGCGGCGGGTTTGAATTTGAACATATTCGAAAGCATTTATTACGGGGCC 94920 ||||| ||| || | |||| | | || ||||| | || || ||| || Sbjct 429555 GACTCCCCCGAGGCCCGTGAGCTGAACAAGCAGATCTTCGAGACTATCTACCACGCTGCT 429496 Query 94921 ATGAAACAATCCGTCCACTTGGCCAGATCGGACGGCGGGCCACACGAATCGTTCCGCGGA 94980 | | ||| | | | |||| ||| ||| || || | ||| | || Sbjct 429495 CTTACCGCATCAAGCGATATTGCCAAGGTGGAGGGC---CCGTACAAGACGTACGAGGGC 429439 Query 94981 TCGCCCTTGGAACAGGGCATTTTTCAGTTCGACCTCTGGGGTGTGAAGCCCTCGGGTCTG 95040 || | ||||||||| ||||||||||| | ||| ||| ||||| || | || Sbjct 429438 AGTCCGGTCTCACAGGGCATCCTTCAGTTCGACATGTGGAATGTCAAGCCATCCGCGCTC 429379 Query 95041 TACGACTGGGAAGCTCTACGCGCTGATGTTATCAAACA---CGGTGTGAAAAACGCGCTG 95097 | ||||||||||| || | || ||||| | |||||| ||| || Sbjct 429378 TGGGACTGGGAAGCCCT---CAAGGACAAGATCAAGGAGACCGGTGTCCGCAACAGCTTG 429322 Query 95098 CTTGTGGCCCCCATGCCCACGGCCTCCACGGCGCAGATCCTTGGCAACAACGAGTCGTTC 95157 | |||| || |||||||| || ||||| |||||||||| ||||||||||||| ||| Sbjct 429321 TTACTGGCGCCAATGCCCACTGCATCCACCTCGCAGATCCTGGGCAACAACGAGTGCTTC 429262 Query 95158 GAACCCTTCACCTCCAACGTGTACAACAGGCGGGTGCTCGCCGGGGAATTCCCCGTCATC 95217 || || | |||||||||| | ||| | | || |||||||| || || |||| || || Sbjct 429261 GAGCCATACACCTCCAACATCTACCAGCGACGTGTGCTCGCTGGCGAGTTCCAGGTTGTC 429202 Query 95218 AACAAGCACCTCCTACGGGACCTGACGTCTCTGGGTGTGTGGGGTGACAAGGTCAAGAAC 95277 ||| || || ||||| |||| || || ||||| ||| | |||||| Sbjct 429201 AACCCTTGGCTTCTCAGGGACTTGACAGAGCTCGGCTTGTGGTCTGAGGCCATGAAGAAC 429142 Query 95278 CAACTGCTACGCGCCAACGGCTCCGTCCAGAACATCCCGCAAATACCGGAGGACATCAAG 95337 | | | || | || ||| | |||||||| || || |||| ||||||||| Sbjct 429141 CGTATCATCGCCGAGGATGGTTCCATACAGAACATTCCCAGCATCCCGGCTGACATCAAG 429082 Query 95338 GCGCTCTACAAGACCGTGTGGGAGATCCCGCAG 95370 || || ||||||||||| ||||| ||| | ||| Sbjct 429081 GCCCTGTACAAGACCGTTTGGGAAATCTCTCAG 429049 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 494708463432680