Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Diaporthe_20ampelina_20[genbank_20GCA_5F001006365.1_202015-05-13] 2,383 sequences; 47,325,858 total letters Query= NC_013288.1 Length=191761 Score E Sequences producing significant alignments: (Bits) Value seq1963 230 3e-55 seq1786 131 2e-25 >seq1963 Length=539952 Score = 230 bits (254), Expect = 3e-55 Identities = 1165/1824 (64%), Gaps = 67/1824 (4%) Strand=Plus/Plus Query 115526 TGAACTGAATGGGTCTCGCCTTGGCCTTTGATCGGAGGTAGTACATCCCCGTCTTGAGCC 115585 |||| ||||||||| || |||| | |||||||||||||| || |||||||| | Sbjct 428862 TGAATTGAATGGGTGCGGCAGCTGCCTGAGTGCGGAGGTAGTACATGCCAGTCTTGAGGC 428921 Query 115586 CCTGCTTCCAGGCATACATATGCATTGAGGACAACTTGGAGAGTGTTGGACTTTC-CATG 115644 | |||||||| | | |||||| || | |||| | | || || || |||| Sbjct 428922 CGAGCTTCCAGCCGGCGAAATGCATGCTGGTGATCTTGCCCATGGACGG-CTCTCGCATG 428980 Query 115645 AAGAGGTTCATACTTTGGGATTGATCGATGAAGCGTCCCCGATCCGCCGCCATATCAATC 115704 || ||| | ||||| || |||||||| || || || || ||||| | | Sbjct 428981 TGGATGTTGAGTGACTGGGACTGGTCGATGAATGCACCACGGTCAGCAGCCATCTG---C 429037 Query 115705 ACATCCTTCATCTT---GATTTCCCACACAGTTCTGTAGAGGTTCTTAATATCATCTGGG 115761 ||| || ||| ||||||||| || || |||| ||| ||| || ||| | ||| Sbjct 429038 ACAATAGTCCTCTGAGAGATTTCCCAAACGGTCTTGTACAGGGCCTTGATGTCAGCCGGG 429097 Query 115762 ATATCCACGATATTTTGGATAGAGCCACCTGCCTTGACCATGAGA---TCCTTCATATCC 115818 || || || || || || ||| | || | | |||| | | |||||| || Sbjct 429098 ATGCTGGGAATGTTCTGTATGGAACCATC---CTCGGCGATGATACGGTTCTTCATGGCC 429154 Query 115819 TTTGACCAGAGACCAATCT-TCTTGAGATCCTCCACGAGGTGCTTA---TTGACAACAAC 115874 | ||||| | || | || | | || ||| ||| || | |||||||| Sbjct 429155 TCAGACCACAAGCCGAGCTCTGTCAAGTCCCT----GAGAAGCCAAGGGTTGACAACCTG 429210 Query 115875 AAACTCACCCGCGAGGGTGCGTCTCAGATAGATGTTGGTCGTGTATGGCTCAAAGCACTC 115934 ||||| || ||||| |||| | | |||||||||| ||||||||||| |||||||| Sbjct 429211 GAACTCGCCAGCGAGCACACGTCGCTGGTAGATGTTGGAGGTGTATGGCTCGAAGCACTC 429270 Query 115935 ATTGTTACCCAAGATTTGGGCTGTGGAGGCTGTGGGCATGGGTGCCATGAGAAGGCTGTT 115994 ||||| |||| ||| || | ||||| || |||||||| || |||| | | |||||| Sbjct 429271 GTTGTTGCCCAGGATCTGCGAGGTGGATGCAGTGGGCATTGGCGCCAGTAACAAGCTGTT 429330 Query 115995 GCGGAGACCCACCCCCCTAATGCGTTCCTTGAGGGCGTCCCAGTCGTAGTTGAGCTT-TG 116053 ||||| ||| | || | || ||||||||||| |||||||| || | || || Sbjct 429331 GCGGACACCGGTCTCCTTGATCTTGTCCTTGAGGGCTTCCCAGTCCCAGA-GCGCGGATG 429389 Query 116054 TCTCCCCCTCCCACATATCAAACTGGAGGATACCTTGGGACGCTGGCGATCCCTCAAATG 116113 || | | |||||| || ||||| ||||| || || || | || ||||| | | Sbjct 429390 GCTTGACATTCCACATGTCGAACTGAAGGATGCCCTGTGAGACCGGACTGCCCTCGTACG 429449 Query 116114 TCTCATATGGGCCCTCAACCTCCGCCAATTCGGAGCTCGCCTCG---AGGGCTGCGTGAT 116170 ||| || |||||||| |||| || | ||| || | || || || ||||| | Sbjct 429450 TCTTGTACGGGCCCTCCACCTTGGCAATATCG---CTTGATGCGGTAAGAGCAGCGTGGT 429506 Query 116171 ACATTGTCTCAAAAATGCGAGCATTCATTGCCTTGGCCTCGTCGGAATCAAACGCGAGAC 116230 | || ||||| || || | |||| | ||||||| ||| || || | | || Sbjct 429507 AGATAGTCTCGAAGATCTGCTTGTTCAGCTCACGGGCCTCGGGGGAGTCGAAAGGCATAC 429566 Query 116231 G--GCACAAAATAAATACATCCGCGAGACCTTGGACACCGAGGCCAATTGGGCGATGTCT 116288 | | | || || |||| || ||||| |||||||| | ||||| || ||||||| Sbjct 429567 GAAGGGCCAAG--AACGCATCAGCAAGACCCTGGACACCAACACCAATCGGTCGATGTCG 429624 Query 116289 CATATTAGACTTTCGAGCGGTCTCC---ACGGGATAAAAATTCCTATCGATAACCCTATT 116345 ||| || || | | || |||| || || || || ||| || | | | || Sbjct 429625 CATGTTG--CTGTTGTA-GGCCTCCTTGACTGGGTAGTGGTTGACATCAATGATCTTGTT 429681 Query 116346 TAGATTTTTGGTGACAACCTTTGTGATTTCATGAAGCTTTTCGTAATCAAAACTGCGAGT 116405 || || | ||| |||| || | ||||| | || || | | | | | | | Sbjct 429682 CAGGTTGCGGACGACGACCTGGGTAACCTCATGCAACTGTTGGAAGTTGTAGCAGTTGTT 429741 Query 116406 CTCTTCATTGACATACTTAGGAAGGGCGATTGACGCCAGATTACACACAGAGGTCTCATC 116465 || | | || ||| || ||||| || || ||||| || || |||| | |||||| Sbjct 429742 GTCATAGTCCACGTACGCCGGCAGGGCAATAGAGGCCAGGTTGCAAACAGCGACCTCATC 429801 Query 116466 CTTATCAGTGTACTCTATAATTTCCGTACACAAATTTGAACTCTTAATGGTGCCCAAGTT 116525 || |||||| || || || || || | ||||| || ||||| |||| ||| Sbjct 429802 AGGGGCACAGTACTCGATGATCTCAGTGCAGAGGTTTGAGCTGCGGATGGTACCCAGGTT 429861 Query 116526 CTTTTGATTTGACTTTGTGTTACACGCA-TCCTTGTAGAGCATATATGGCGTCCCCGTCT 116584 || || || |||| ||| | || || ||||| ||||| | || | || |||| Sbjct 429862 TTTCTGGTTGCTCTTTCGGTT-CGCGTGGTCTTTGTATAGCATGAAGGGGTTGCCAGTCT 429920 Query 116585 CCGTTTGGGACTTGAGAATAGCCTTCCATA-CATCGGCGGCTGGCACAGTGGCGTTGG-- 116641 | || || | || ||| || || | ||| | | || | | || || ||| ||| Sbjct 429921 CGGTCTGAGCCTCGAGGATGGCGTACCACAACTTCTGGGCCTT---CA-TGGTCTTGCGA 429976 Query 116642 -CTCGCCCCTCCTCCTCGTACTTTGTGTAGAGGGCCTCAAACTCTTCACCCACAGC-CTC 116699 | || ||||||| ||||||||| |||||| ||||||||||| ||| || ||| || Sbjct 429977 CCGCGGCCCTCCTTCTCGTACTTCTCGTAGAGAGCCTCAAACTCCTCA-CCGTAGCAGTC 430035 Query 116700 TGAGAGCCCTGGTGCCTTATCTGGACAGAAGAGAGACCATTGACCACCCTCCTCAACCCG 116759 | || || || || || || || | ||| | ||| | || || ||| ||||| Sbjct 430036 GGCAAGTCCAGGGCACTCATTGGGGCACATGAGGGTCCACTCGCCGTTCTTCTCGACCCG 430095 Query 116760 CTTCATGAAGAGGTCTGGGATCCAGAGCGCCGAGAAGAGATCCCGACAGCGAGCTTCTTC 116819 ||||||||| || || ||||||||||| || ||| ||||| || || || || Sbjct 430096 CTTCATGAACAGATCGGGGATCCAGAGTGCAAGGAAAAGATCACGGGCTCGGATCTCCTC 430155 Query 116820 ATCCCCCTGATTGAGACGCAACTCCAAAAAGTCCATGATATCCGCGTGCCACGGTTCCAG 116879 | || || || |||| || | ||| || | || || |||||||| || || || Sbjct 430156 CTTGCCGTGGTTCTTGCGCAGGTCAAGAAACTCGAAGACGTCTGCGTGCCATGGCTCAAG 430215 Query 116880 GTACACCGCGATTGACCCCTTGCGACG------ACCAGCCTGGTTTACATACCTCGCCGT 116933 ||| | |||| | || | |||| || |||||| ||||| | || || Sbjct 430216 GTAGATAGCGAAGGCACC---GGGACGCTTGTTGCCGCCCTGGTCGACATATCGGGCAGT 430272 Query 116934 TGCGTTAAATACGCGAAGCATTGGAATGATACCATCAGATTGGCCATTTGT-CCCCCGA- 116991 |||||| || || | ||| || |||| |||| || ||| || || || ||| Sbjct 430273 ATTGTTAAAGACCCGCAACATGGGGGTGATGCCATTGGAAGTGCCGTTAGTACCAGCGAT 430332 Query 116992 ATACGAGACTTGTTGGCTCTGACATCGTGGATGTGCATACCAATACCCCCTGCCCACTTT 117051 || ||| | | |||| | || | ||||| || | || ||||| || ||| ||| Sbjct 430333 GTATGAGCC--GGTGGCACGGATACGGTGGACGTTGAGGCCGATACCTCCCGCCATCTTG 430390 Query 117052 GAGATTTGTGCGCACTCCGTGAGACTGCCGTAGATCCCATCGATCGAGTCACCCTTATTT 117111 ||||| || || | |||| || ||||||| || || || ||| |||| | Sbjct 430391 GAGATCATGGCACAGGTCTTGAGCGTGTCGTAGATGCCCTCAATGCTGTCCTCCTTCATA 430450 Query 117112 GCGATGAGGAAGCAGCTCGACATTTGTGGCCTTGGTGTACCAGCGTTGAAGAGGGTTGGT 117171 ||| ||||||||| |||| || ||| || || ||||| ||||| | || || Sbjct 430451 TCGACGAGGAAGCACGATGACAGCTGGGGCTGGGGAGTGCCAGCATTGAATAATGTGGGC 430510 Query 117172 GTCGCGTGGATGAACATACCT-TGGGACATCTTATCGTAGGTCTCCAAGACAGAGGGAAT 117230 | |||||| |||| | || | | ||||||| | ||| ||||| | ||| | Sbjct 430511 GAGGCGTGGGTGAAGA-ACTTGTTGGACATCAGGTTGTACGTCTCGATGACTCTCTCGAC 430569 Query 117231 GTCTTCCCCGTGAATACCGATTGAGACCCGCATAAACATGTATTGGGGTGTTTCCATCAG 117290 ||| || || || |||| | ||| ||||| | ||||| ||| || || | | Sbjct 430570 GTCATCTCCCCAGATGCCGACAGCGACACGCATGATCATGTGTTGTGGCCGCTCGACGAC 430629 Query 117291 GATACCATCGAGCCTCTGGAGGTA 117314 |||| |||||| || | ||||| Sbjct 430630 TTTACCGTCGAGCTTCAGCAGGTA 430653 >seq1786 Length=271448 Score = 131 bits (144), Expect = 2e-25 Identities = 307/457 (67%), Gaps = 16/457 (4%) Strand=Plus/Minus Query 127231 GTAGTCCCCGACCCGCTTCTCGAAGAAGTTTGTCTTCCCATCGAGGCTGATATTCTCCAT 127290 |||||| ||||| ||||||||||||||||| ||||| ||| ||||| ||| |||||||| Sbjct 165764 GTAGTCACCGACACGCTTCTCGAAGAAGTTGGTCTTGCCACCGAGGGAGATGTTCTCCAT 165705 Query 127291 AAAATCAAATGGGTTCTTTGAGTTCCAAA--TTGTTGGCACCC----CAATCTGTTTGAG 127344 || || || ||||| || || ||| |||| | ||| | | | || Sbjct 165704 GAAGTCGAAGGGGTTGGACGACTTGTAAACCTTGTCGTTGCCCAGGGCGACC------AG 165651 Query 127345 GAGACGATCCGAGACGTACTCAATGTACTCAGACATCTTCTCAGAGTTCATACCGATGAG 127404 ||| || || | ||| | || ||||||| ||| | ||||||||| |||| ||| Sbjct 165650 GAGGCGGTCGGCGACAAATTCGATGTACTGCTTCATGAGGTTAGAGTTCATGCCGAGGAG 165591 Query 127405 GTTACATGGGAGCGCGTCCAAGATGAACCCCTTCTCAATGTCCACAGCTTCCCGTACGAT 127464 | |||||| || || || | || ||||||| ||| | ||||| || | ||| Sbjct 165590 GGCACATGGCAGAGCCTCGGTCAAAAATTCCTTCTCGATGGCGACAGCCTCGGTGATGAT 165531 Query 127465 GGCGTGAATAGTGTCCACCCCAGGTCTATTGCGTAAAGT-CTTGAAGAGTTCCACA-GCA 127522 | | || | | | | |||| || | | | || ||| || ||| || Sbjct 165530 GTCCTGGACGCGCTGCTTGCTTGGTCGGTT-CTTGAGGTGGGAGAACAG-CAGACAGGCG 165473 Query 127523 AACTCTTGGTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGACCTGGC 127582 || || ||| |||||||| ||||| ||||| ||||| || |||||| ||| || ||| Sbjct 165472 AAGTCGGTGTGCAGACCCTCATCACGAGAGATCAGTTCGTTGGAGAAGGTCAGGCCAGGC 165413 Query 127583 ATGAGACCCCGCTTCTTCAACCAGAAAATCGCACAAAATGAGCCAGAGAAGAAGATCCCC 127642 ||||| || |||||||| | |||||| || | | |||| ||| ||||||||| ||| Sbjct 165412 ATGAGCCCACGCTTCTTGAGCCAGAAGATGGAAGCGAATGCGCCGCTGAAGAAGATACCC 165353 Query 127643 TCCACACACGCGAACGCAAATAGACGCTCGGCAAAGG 127679 || || || || |||| || |||| |||| ||| Sbjct 165352 TCGACGGCGGCAAAGGCAACCAGTCGCTGGGCATAGG 165316 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 613488925154280