Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Diaporthe_20ampelina_20[genbank_20GCA_5F001006365.1_202015-05-13] 2,383 sequences; 47,325,858 total letters Query= NC_013668.3 Length=248526 Score E Sequences producing significant alignments: (Bits) Value seq1963 147 3e-30 >seq1963 Length=539952 Score = 147 bits (162), Expect = 3e-30 Identities = 402/606 (66%), Gaps = 10/606 (2%) Strand=Plus/Plus Query 203839 CTTGTCCACCGTGAACTGAATGGCGTTCACGGCAG--GCCTGCTT-CTCAGATAGTACAT 203895 || ||| || ||||| ||||||| || | ||||| ||||| | | || |||||||| Sbjct 428851 CTGGTCGACAGTGAATTGAATGG-GTGC--GGCAGCTGCCTGAGTGCGGAGGTAGTACAT 428907 Query 203896 GCCGGTCTTTAGGCCCTTCTGCCACCCGTACATGTGCATGGAAGACAGTTTGCTCACGTT 203955 ||| ||||| ||||| || ||| ||| | |||||| | | |||| || | Sbjct 428908 GCCAGTCTTGAGGCCGAGCTTCCAGCCGGCGAAATGCATGCTGGTGATCTTGCCCATGGA 428967 Query 203956 GGGGTCGGCCATGTGAATGTTCAGAGACTGGCTTTGGTCGATGAAAGGCGCCCGATCTGC 204015 || || |||||| ||||| || |||||| ||||||||||| | | || || || Sbjct 428968 CGGCTCTCGCATGTGGATGTTGAGTGACTGGGACTGGTCGATGAATGCACCACGGTCAGC 429027 Query 204016 GGCCATATTGATAATGGTCTTCTGCGAAATCTCCCACACCGTCTTGAACACGTCTCTGGT 204075 ||||| | | ||| ||| |||| || || ||||| || |||||| ||| | | || | Sbjct 429028 AGCCATCTGCACAATAGTCCTCTGAGAGATTTCCCAAACGGTCTTGTACAGGGCCTTGAT 429087 Query 204076 GTGTTGAGGCACATCTTCCCACGTCCTG-ATCGAGCCGTTGTCGGCCATCAGTCTCATCC 204134 || || | || | || ||| || || || | ||||| || | | || Sbjct 429088 GTCAGCCGGGATG-CTGGGAATGTTCTGTATGGAACCATCCTCGGCGATGATACGGTTCT 429146 Query 204135 TCGTCTCCTCCCCCCACATGCCCAAC-CTGATCAGCTCCCGCACCAGGTGGGGGTTGATG 204193 || | |||| ||||| ||| | | ||| ||| |||| | || ||||||| Sbjct 429147 TCATGGCCTCAGACCACAAGCCGAGCTCTG-TCAAGTCCCTGAGAAGCCAAGGGTTGACA 429205 Query 204194 ATCTGAAAGTCTCCGGACAGCACCCCTCGGGTGAACAGGTTGTTGGTGAATGGTTCGAAC 204253 | ||| || || || | ||||| | ||| | | | |||| |||| |||| ||||| Sbjct 429206 ACCTGGAACTCGCCAGCGAGCACACGTCGCTGGTAGATGTTGGAGGTGTATGGCTCGAAG 429265 Query 204254 GCCTCGTTGTTGCCGAAAATCTGAGCGGTGCTGGCCGTGGGCATGGGAGCCAGGAGCAGG 204313 |||||||||||| | ||||| | |||| || |||||||| || ||||| | || | Sbjct 429266 CACTCGTTGTTGCCCAGGATCTGCGAGGTGGATGCAGTGGGCATTGGCGCCAGTAACAAG 429325 Query 204314 GAGTTGCGCACACCGTATTTTTGGACCCTGCGCTTCAGAGAGGTCCAGTCGTGCATCGCA 204373 |||||| |||||| | | || | || ||| || | |||||| | ||| Sbjct 429326 CTGTTGCGGACACCGGTCTCCTTGATCTTGTCCTTGAGGGCTTCCCAGTCCCAGAGCGCG 429385 Query 204374 CTGGGTTTCACGCCCCACATGTCGAACTGAAAGATGCCTTGACTGACTGGGCTGCCCTTG 204433 || || || ||||||||||||||||| |||||| || ||| || ||||||| | Sbjct 429386 GATGGCTTGACATTCCACATGTCGAACTGAAGGATGCCCTGTGAGACCGGACTGCCCTCG 429445 Query 204434 TACGTC 204439 |||||| Sbjct 429446 TACGTC 429451 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 795131514314480