Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Diaporthe_20ampelina_20[genbank_20GCA_5F001006365.1_202015-05-13] 2,383 sequences; 47,325,858 total letters Query= NC_013953.1 Length=156344 Score E Sequences producing significant alignments: (Bits) Value seq1786 172 5e-38 seq1562 140 3e-28 seq1287 118 1e-21 seq1808 111 2e-19 >seq1786 Length=271448 Score = 172 bits (190), Expect = 5e-38 Identities = 352/514 (68%), Gaps = 8/514 (2%) Strand=Plus/Minus Query 132591 CATCACGCCAAATTTTTGATATTCGCCCACCTTTTTCTCaaaaaaaTTAGTTTTTCCCTC 132650 ||| |||||| || || || || || || ||||| || || || || || || | Sbjct 165782 CATGACGCCAGCCTTCTGGTAGTCACCGACACGCTTCTCGAAGAAGTTGGTCTTGCCACC 165723 Query 132651 CAAGGAAATGAGCGTCATAAAATCCAAGGGGTTGGCTGTGTTGTAGTGCTTGGTGCCGAT 132710 | ||| ||| | ||| || || |||||||||| | ||||| |||| | | Sbjct 165722 GAGGGAGATGTTCTCCATGAAGTCGAAGGGGTTGGACGACTTGTAAACCTTGTCGTTGCC 165663 Query 132711 CAGGTCGACGAGCAGCCTGTCGGCCACGAACTCGATGTATTGCGACATG-GTTTCGCAAT 132769 |||| |||| || || | |||||| || || |||||||| ||| |||| | || | | | Sbjct 165662 CAGGGCGACCAGGAGGCGGTCGGCGACAAATTCGATGTACTGCTTCATGAGGTTAG-AGT 165604 Query 132770 TAAGTCCCAGCAGACGCACC-GGCAGCGCTTCGGTGAGAAAGCGTTGCTCGATGGCGACC 132828 | | || || || |||| ||||| || ||||| | ||| | |||||||||||| Sbjct 165603 TCATGCCGAGGAGG-GCACATGGCAGAGCCTCGGTCAAAAATTCCTTCTCGATGGCGACA 165545 Query 132829 GCGTCGGTGACGATTTCCCTAACGCGCGCCGCGCTCGGCCGTTGCACCAAATGCTTGAAC 132888 || ||||||| ||| ||| |||||| | ||| || || | | | || |||| Sbjct 165544 GCCTCGGTGATGATGTCCTGGACGCGCTGCTTGCTTGGTCGGTTCTTGAGGTGGGAGAAC 165485 Query 132889 ATCAAGCAAGCAAAGTCGCAATGCAAGCCCTCGTCCCTGGAAATGAGTTCGTTGCTGAAA 132948 | || || || |||||| |||| ||||| || | || || ||||||||| ||| Sbjct 165484 AGCAGACAGGCGAAGTCGGTGTGCAGACCCTCATCACGAGAGATCAGTTCGTTGGAGAAG 165425 Query 132949 GTCAAGCCGGGCATGAGGCCGCGTTTTTTGAGCCAAAATATGGCGGCGAAACTGCCCGAA 133008 |||| ||| |||||||| || || || |||||||| || |||| ||||| ||| Sbjct 165424 GTCAGGCCAGGCATGAGCCCACGCTTCTTGAGCCAGAAGATGGAAGCGAATGCGCCGCTG 165365 Query 133009 AAGAAGACGCCCTCGACGGCCGCGAAAGCCACCAGGCGCTCGCCGAACGTGG-CT-TCTT 133066 ||||||| ||||||||||| || || || ||||| |||| | | | |||| || | Sbjct 165364 AAGAAGATACCCTCGACGGCGGCAAAGGCAACCAGTCGCTGGGCATAGGTGGACTCGCGG 165305 Query 133067 TGCTGGCGATCCAGCGCAGCGCCCATTCGGCCTT 133100 | ||| |||||| ||| ||||| |||||||| Sbjct 165304 TCCTG--GATCCACTTCAGAGCCCAGTCGGCCTT 165273 Score = 127 bits (140), Expect = 2e-24 Identities = 194/276 (70%), Gaps = 3/276 (1%) Strand=Plus/Minus Query 133167 GTAGGTGTCGATGAGGGTCGAATACATTTCCGAGTGTACGTTCTCCATGGCGATTTGAAA 133226 |||||| || |||||| || || | || ||||| | ||||||||| ||| || || Sbjct 165150 GTAGGTATCAATGAGGAGAGAGTATGTCTCTGAGTGGATGTTCTCCATCATGATCTGGAA 165091 Query 133227 GCCGTAAAAGCACCGCGCCTCGACCACCTGCACTTCTTGAGCGAAACGCTCGACCAGATT 133286 |||||| ||||| || |||||| | ||| || || ||| ||||| || || || Sbjct 165090 GCCGTAGAAGCATCGAGCCTCGGGGATCTGAACCTCGCCGCTGAACCGCTCCACGAGGTT 165031 Query 133287 TTCGTTGACGATGCCGTCGCTGGCGGCGAAAAAGGCCAGCACGTGCTTGATGAAATGGCG 133346 ||||||||||| || || || ||||| ||||| || | ||| | |||| || Sbjct 165030 CTCGTTGACGATTCCATCTGAAGCAGCGAAGAAGGCGAGGATGTGGGACACAAAATACCG 164971 Query 133347 CTCGTTGTCGTTCAAGCGCT---CCCAGTCGCGCGTGTCCTTGGACAGGTCCACCTCCTC 133403 |||| |||| ||| || | ||||||| || |||||||||| || || | |||||| Sbjct 164970 TTCGTCGTCGGTCAGACGGTTGCTCCAGTCGTGCATGTCCTTGGAGAGATCAATCTCCTC 164911 Query 133404 GACGGTCCAAAACGACGCCTCGGCTTTTTTGTACAT 133439 | | ||||| || || || ||| || |||||||| Sbjct 164910 GGCAGTCCAGAAAGAAGCTTCGTGCTTCTTGTACAT 164875 >seq1562 Length=24550 Score = 140 bits (154), Expect = 3e-28 Identities = 167/227 (74%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 ||||| || ||||| || || ||||||||||| ||||||||| | || || ||| | || Sbjct 19606 ATGCAGATCTTCGTGAAGACCCTCACGGGCAAGACCATCACCCTTGAGGTGGAGTCTTCC 19547 Query 38304 GACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAA 38363 |||| | | | | | || || |||| ||||| || || || ||| | ||||| Sbjct 19546 GACACCATCGACAATGTCAAGTCCAAGATCCAGGACAAGGAAGGCATCCCCCCAGACCAG 19487 Query 38364 CAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 38423 ||||| || || | ||| ||||| ||||| || |||| ||||||||| |||||||||| Sbjct 19486 CAGCGCCTGATCTTCGCCGGCAAGCAGCTCGAGGACGGCCGCACCCTCTCCGACTACAAC 19427 Query 38424 ATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGG 38470 ||||| ||||| | || || || |||||||||| || |||| || Sbjct 19426 ATCCAGAAGGAGTCCACCCTCCACCTGGTGCTGCGCCTGCGAGGTGG 19380 >seq1287 Length=86926 Score = 118 bits (130), Expect = 1e-21 Identities = 137/182 (75%), Gaps = 2/182 (1%) Strand=Plus/Minus Query 38253 TTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACCGACAGCGTG 38312 ||||| || || || |||||||| || |||||| | || || ||| || |||||| | | Sbjct 66671 TTCGTGAAGACCCTGACGGGCAAGACTATCACCCTTGAGGTGGAGTCCTCCGACACCATC 66612 Query 38313 CA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAACAGCGGCT 38371 | |||| | || || |||| ||||| |||||||||||| | ||||| ||||| | Sbjct 66611 GACAACG-TCAAGTCCAAGATCCAGGACAAGGAGGGAATTCCCCCAGACCAGCAGCGATT 66553 Query 38372 CATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAAAA 38431 || | ||| ||||| ||||| || || | ||||||||| ||||||||||||||| || Sbjct 66552 GATCTTCGCCGGCAAGCAGCTTGAGGATGGCCGCACCCTCTCCGACTACAACATCCAGAA 66493 Query 38432 GG 38433 || Sbjct 66492 GG 66491 >seq1808 Length=99283 Score = 111 bits (122), Expect = 2e-19 Identities = 163/228 (71%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 ||||| || |||||||| || ||||| ||||| |||||||| |||| || ||| || || Sbjct 20005 ATGCAGATCTTCGTAAAGACCCTCACCGGCAAGACCATCACTCTCGAGGTTGAGTCCTCC 19946 Query 38304 GACAGCGTGCA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCA 38362 || | | | |||| | || || || | ||||| ||||| || ||| | ||||| Sbjct 19945 GATACTATTGACAACG-TCAAGTCCAAGATTCAGGACAAGGAGGGTATCCCCCCTGACCA 19887 Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422 |||||| || || | || ||||| || || || || | || |||||| ||||||||| Sbjct 19886 ACAGCGCCTGATCTTTGCTGGCAAGCAACTCGAGGATGGCCGTACCCTCTCCGACTACAA 19827 Query 38423 CATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGG 38470 ||| || |||||| | || || || | || || ||| || | || || Sbjct 19826 CATTCAGAAGGAATCCACCCTTCACCTCGTTCTCCGTCTGCGTGGTGG 19779 Score = 96.9 bits (106), Expect = 3e-15 Identities = 161/230 (70%), Gaps = 2/230 (1%) Strand=Plus/Minus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 ||||| || || || || || | ||||| || || || || |||| || ||| | | Sbjct 19549 ATGCAGATTTTTGTGAAGACCTTGACGGGGAAGACTATTACGCTCGAGGTTGAGTCATCG 19490 Query 38304 GACA-GCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCA 38362 |||| | || |||| | || || || | ||||| ||||| || || | ||||| Sbjct 19489 GACACGATTGACAACG-TCAAGTCGAAGATTCAGGACAAGGAGGGCATCCCACCAGACCA 19431 Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422 || || ||||||| ||| ||||| |||||||| |||| || || | |||||||| Sbjct 19430 GCAACGACTCATTTTCGCTGGCAAGCAGCTGGAAGACGGCCGGACTTTGTCTGACTACAA 19371 Query 38423 CATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGGCC 38472 ||| || ||||| | |||||||| |||||||| ||| | | || |||| Sbjct 19370 CATTCAGAAGGAGTCCACGCTGCACTTGGTGCTCCGTCTTCGTGGTGGCC 19321 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 500157901102720