Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Diaporthe_20ampelina_20[genbank_20GCA_5F001006365.1_202015-05-13] 2,383 sequences; 47,325,858 total letters Query= NC_014766.1 Length=194022 Score E Sequences producing significant alignments: (Bits) Value seq1963 248 1e-60 seq1786 107 2e-18 seq377 93.3 5e-14 >seq1963 Length=539952 Score = 248 bits (274), Expect = 1e-60 Identities = 1141/1781 (64%), Gaps = 53/1781 (3%) Strand=Plus/Minus Query 111612 CCACAGTACATGTTCATGCGGGTCGCGATCGGTATCCATGGGGAAGATATTGATTCTGTT 111671 ||||| ||||| ||||||| ||||| |||| ||| || || || | || || Sbjct 430617 CCACAACACATGATCATGCGTGTCGCTGTCGGCATCTGGGGAGATGACGTCGAGAGAGTC 430558 Query 111672 TTGGAGACATACGACAAGATGTCCCGTGGTATGTTCATCCACGCAACACCAACCCTCTTC 111731 | ||||| ||| || ||||||| | |||| |||||| | || || | ||| Sbjct 430557 ATCGAGACGTACAACCTGATGTCCAACAAGTTCTTCACCCACGCCTCGCCCACATTATTC 430498 Query 111732 AACGCTGGTACACCAAGACCCCAAATGTCCAGTTGTTTCCTTATTGCAAACAAGGAGGAT 111791 || ||||| || || ||||| |||| || ||||| | | | |||||||| Sbjct 430497 AATGCTGGCACTCCCCAGCCCCAGCTGTCATCGTGCTTCCTCGTCGATATGAAGGAGGAC 430438 Query 111792 TCAATCAATGGCATTTACGGCACTCTCACTGAATGTGCCCAAATCTCAAAGTGGGCTGGT 111851 || | ||||| |||| ||| |||| |||||| ||||| ||| ||| || Sbjct 430437 AGCATTGAGGGCATCTACGACACGCTCAAGACCTGTGCCATGATCTCCAAGATGGCGGGA 430378 Query 111852 GGTATCGGGATGCACATCCATGATGTCAGAGCCAACAAGTCTCGTAT-TAGA-GGTACAA 111909 |||||||| | || |||| | || | |||| | | ||| || | | ||||| | Sbjct 430377 GGTATCGGCCTCAACGTCCACCGTATCCGTGCCACC--GGCTCATACATCGCTGGTACTA 430320 Query 111910 ATGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCGCTATG 111969 | || || |||| || | || ||| | || || |||||| || || || |||| Sbjct 430319 ACGGCACTTCCAATGGCATCACCCCCATGTTGCGGGTCTTTAACAATACTGCCCGATATG 430260 Query 111970 TAAACCAAGCTGG------GCGTCGCAAGGGATCTATCGCAGTCTATCTTGAGCCATGGC 112023 | |||| | || ||||| | || | |||| |||| ||||||||||||| Sbjct 430259 TCGACCAGGGCGGCAACAAGCGTCCC---GGTGCCTTCGCTATCTACCTTGAGCCATGGC 430203 Query 112024 ACGCGGATATCATGGAGTTCCTTGAGTTGCGTCTCAACCAAGGTGATGAGGAGGCGCGGT 112083 |||| || || | ||||| ||||| |||| ||||| || | |||||| || Sbjct 430202 ACGCAGACGTCTTCGAGTTTCTTGACCTGCGCAAGAACCACGGCAAGGAGGAGATCCGAG 430143 Query 112084 GCCGCGATCTCTTCTCCGCTCTCTGGATTCCAGATCTCTTCATGAAGAGAGTTGAGGAGA 112143 ||| ||||| ||| || |||||||| || ||||| ||||||||| | || ||| ||| Sbjct 430142 CCCGTGATCTTTTCCTTGCACTCTGGATCCCCGATCTGTTCATGAAGCGGGTCGAGAAGA 430083 Query 112144 GTGGCAATTGGTCTCTCTTTTGTCCAGACAAGGCACCCGGTCTCTCCGATGCCGTGGGTG 112203 ||| | ||| | ||| | || || | || || || || |||| | |||| Sbjct 430082 ACGGCGAGTGGACCCTCATGTGCCCCAATGAGTGCCCTGGACTTGCCGACTGCTACGGTG 430023 Query 112204 AGGAGTTTGAAGCCCTCTACACAAAGTACGAGGAAGAAAGTCGGGCGACTGC--GACGGT 112261 |||||||||| || |||||| |||||||| |||| | | | ||| || ||| | Sbjct 430022 AGGAGTTTGAGGCTCTCTACGAGAAGTACGA-GAAGGAGGGC-CGCGGTCGCAAGACCAT 429965 Query 112262 GCCAGCTGCCGATG-TGTGGAAAGCTATTCTCAAGTCTCAAACCGAGACTGGTACACCAT 112320 | || | || | ||||| | || || ||| || |||| ||||||||||| | || | Sbjct 429964 G-AAGGCCCAGAAGTTGTGGTACGCCATCCTCGAGGCTCAGACCGAGACTGGCAACCCCT 429906 Query 112321 ATATGCTTTACAAAGACGCCTGTAACCAAAAGAGTAATCAAAAGAATTTGGGTGTGATCA 112380 ||||| ||||||||| | |||| |||||| || || || || ||||| ||| Sbjct 429905 TCATGCTATACAAAGACCACGCGAACCGAAAGAGCAACCAGAAAAACCTGGGTACCATCC 429846 Query 112381 AGAGTTCCAACCTCTGTACAGAAATCTTGGAATTTACAGACAAAGATGAGACGGCTGTGT 112440 || || |||||||| || || ||| | || | | | |||||| ||||| | Sbjct 429845 GCAGCTCAAACCTCTGCACTGAGATCATCGAGTACTGTGCCCCTGATGAGGTCGCTGTTT 429786 Query 112441 GTAACCTCGCATCAATCGCTCTCCCCAAGTATGTGGATCCAGAGACAAAGAC--ATTTGA 112498 | ||||| || || || || || || ||| ||||| | ||||| || | | Sbjct 429785 GCAACCTGGCCTCTATTGCCCTGCCGGCGTACGTGGA--CTATGACAACAACTGCTACAA 429728 Query 112499 TTATGAAAAACTCCACGAAGTTACGAAAACTGTCACAAAAAACCTAAACAGAGTTATTGA 112558 | || | | || || ||||| | ||| ||||| |||| | ||||| Sbjct 429727 CTTCCAACAGTTGCATGAGGTTACCCAGGTCGTCGTCCGCAACCTGAACAAGATCATTGA 429668 Query 112559 TAGAAATTTTTACCCCGTTGAGACTGCTCGTAAATCTAATATGAGACACCGTCCAATTGG 112618 | || ||||| || || || || || ||| |||| || || ||||| Sbjct 429667 TGTCAACCACTACCCAGTCAAGGAGGCCTACAACAGCAACATGCGACATCGACCGATTGG 429608 Query 112619 TCTCGGTGTCCAAGGTCTCGCGGATGTATTCAT---TCTTTGTCGCCACGCATTT-GATT 112674 | | |||||||| ||||| || |||| ||| | ||| || | || ||| || | Sbjct 429607 TGTTGGTGTCCAGGGTCTTGCTGATGCGTTCTTGGCCCTTCGT----ATGCCTTTCGACT 429552 Query 112675 CCGACGAAGCGAAGGAAATCAATGCGCGTATATTTGAGACAATGTATCACGCCGCTCTT- 112733 || ||| || || | || || || || ||||| || || ||||| |||||| Sbjct 429551 CCCCCGAGGCCCGTGAGCTGAACAAGCAGATCTTCGAGACTATCTACCACGCTGCTCTTA 429492 Query 112734 --GAGGCGAGTTCGGAGTTGGCAGAGGTTGATGGTCCATATGAAACCTTTGAGGGTTCTC 112791 | | || || ||| || |||| || || || || | || | ||||| || Sbjct 429491 CCGCATCAAG--CGATATTGCCA-AGGTGGAGGGCCCGTACAAGACGTACGAGGGCAGTC 429435 Query 112792 CAGCTTCACAAGGGGTGCTTCAATTTGATATGTGGGAAGGTGAGACCAAGC-TTCACTAC 112850 | | ||||| || | ||||| || || |||| |||| || | ||| | | || Sbjct 429434 CGGTCTCACAGGGCATCCTTCAGTTCGACATGT-GGAATGTCAAGCCATCCGCGCTCTGG 429376 Query 112851 GACTGGGACGCTCTCAAGGAACGCATCAAGGAGAAGGGTCTTCGTAACAGTCTTTTGATG 112910 |||||||| || |||||||| |||||||||| ||| | || ||||| | || || Sbjct 429375 GACTGGGAAGCCCTCAAGGACAAGATCAAGGAGACCGGTGTCCGCAACAGCTTGTTACTG 429316 Query 112911 GCACCAATGCCAACAGCCTCCACCGCACAAATCTTGGGTAATAATGAATGCTTTGAACCC 112970 || |||||||| || || |||||| | || ||| |||| || || || ||||| || || Sbjct 429315 GCGCCAATGCCCACTGCATCCACCTCGCAGATCCTGGGCAACAACGAGTGCTTCGAGCCA 429256 Query 112971 TACACGACGAACATCTATCTGAGAAGAACCCTCGCGGGAGAGTTTGTGATTGTCAAC--- 113027 ||||| | |||||||| | | || | ||||| || ||||| | |||||||| Sbjct 429255 TACACCTCCAACATCTACCAGCGACGTGTGCTCGCTGGCGAGTTCCAGGTTGTCAACCCT 429196 Query 113028 AAGCATCTCGTGGATGACCTCAAAGAGATTGGTCTCTGGTCCAAGGATATGAAGGATCTC 113087 || |||| | ||| | | |||| | || | ||||| ||| |||||| | | Sbjct 429195 TGGCTTCTCAGG---GACTTGACAGAGCTCGGCTTGTGGTCTGAGGCCATGAAGAACCGT 429139 Query 113088 ATGGTGAAAGCGGGTGGTTCCATTCAAAATATTGTGGATATTCCAGATGAAATTAAGAAG 113147 || | | || ||||||||| || || ||| || || | ||| || ||| Sbjct 429138 ATCATCGCCGAGGATGGTTCCATACAGAACATTCCCAGCATCCCGGCTGACATCAAGGCC 429079 Query 113148 TTGTACCGCACAGTTTGGGAAATCAAGATGAAGGATGTCATTGACATGGCCGCAGATCGT 113207 ||||| || |||||||||||| || | | | | | ||||| || || ||| Sbjct 429078 CTGTACAAGACCGTTTGGGAAATCTCTCAGAGGACTATTGTGCAGATGGCTGCTGACCGT 429019 Query 113208 GGTCGCTTCATTGATCAAAGTCAAAGT--ATGAATCTATTCATG-GAAAGTCCAACGATG 113264 ||| ||||| || | |||| ||| | || | |||| || || || | ||| Sbjct 429018 GGTGCATTCATCGACC--AGTCCCAGTCACTCAACATCCACATGCGAGAG-CCGTCCATG 428962 Query 113265 TCCAAGCTCTCTTCTATGCACATGTACAGTTGGAAGAAGGGTCTCAAAACGGGGATGTAT 113324 |||| || | ||||| | | | |||||| || ||||| || || ||||| Sbjct 428961 GGCAAGATCACCAGCATGCATTTCGCCGGCTGGAAGCTCGGCCTCAAGACTGGCATGTAC 428902 Query 113325 TACCTCCGATCTAAGGCAAAGGCGCGC-CCAATTCAGTTCA 113364 |||||||| || ||||| || ||| || ||||| |||| Sbjct 428901 TACCTCCGCACTCAGGCAGCTGC-CGCACCCATTCAATTCA 428862 >seq1786 Length=271448 Score = 107 bits (118), Expect = 2e-18 Identities = 153/215 (71%), Gaps = 8/215 (4%) Strand=Plus/Plus Query 102110 AGTTCCATGTATTCAAAAGAAAGCGGATTGGGCTATGAAGTGGTTTGATACAAAGTCGCG 102169 |||||| || || | ||||| || || |||||| |||||||| || || |||| Sbjct 165254 AGTTCCCTGCATCCGCAAGAAGGCCGACTGGGCTCTGAAGTGG----ATCCAGGACCGCG 165309 Query 102170 TT----CCTTTGCTGAGCGACTCTTCGCATTTGCGTGTGTTGAGGGTATCTTCTTCTCTG 102225 ||| ||| ||||||| | || ||||| || ||||||||||||||| | Sbjct 165310 AGTCCACCTATGCCCAGCGACTGGTTGCCTTTGCCGCCGTCGAGGGTATCTTCTTCAGCG 165369 Query 102226 GTTCCTTCTGCGCTATTTATTGGCTCAAGAAGCGAGGTCTCATGCCAGGTCTCTGCTTCT 102285 | | ||| | || | |||||||||||||| || |||||||| || || ||||| Sbjct 165370 GCGCATTCGCTTCCATCTTCTGGCTCAAGAAGCGTGGGCTCATGCCTGGCCTGACCTTCT 165429 Query 102286 CCAACGAGCTTATCTCTCGTGACGAGGGACTCCAC 102320 ||||||| || ||||||||||| ||||| || ||| Sbjct 165430 CCAACGAACTGATCTCTCGTGATGAGGGTCTGCAC 165464 >seq377 Length=268055 Score = 93.3 bits (102), Expect = 5e-14 Identities = 162/233 (70%), Gaps = 16/233 (7%) Strand=Plus/Plus Query 16064 GGCATCAATCTCATCAATGAAGACGATGCATGGTTGATTTTCGCGAGCGACTTCAAAGAG 16123 ||||||||||||||||||||| || ||||| || || | ||| || | || || Sbjct 88939 GGCATCAATCTCATCAATGAAAACAATGCAAGGGGCGTTCTTGCGTGCTTGCGCGAACAG 88998 Query 16124 ATCCCGTACACGCTT--GGCGCCCACACCAACAAACATCTCCACAAAGTTTGCGGCGGA- 16180 ||||| ||| ||| ||| || ||||| |||||||| ||||| || | |||| Sbjct 88999 GTCCCG--CACTCTTGAGGCACCGACACCGACAAACATTTCCACGAACT------CGGAT 89050 Query 16181 ACATTG-----GATGAAGGGGACATTAGATTCACCCGCAATGGCTCGGGCGAGAAGAGTC 16235 || || || ||| || || |||||||| ||| |||| |||||| || ||| Sbjct 89051 CCACTGACGCTGAAGAACGGCACCCCCGATTCACCGGCAGTGGCCTTGGCGAGTAGTGTC 89110 Query 16236 TTACCCGTACCTGGCTTACCCGCGAGGAGGGCACCTCGTGGAATCTTGGCGCC 16288 ||||| || ||||| || | | || |||||| || |||||||| ||||| Sbjct 89111 TTACCAGTTCCTGGGGGCCCAGACAAGATGGCACCGCGAGGAATCTTTGCGCC 89163 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 620723909635760