Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Diaporthe_20ampelina_20[genbank_20GCA_5F001006365.1_202015-05-13] 2,383 sequences; 47,325,858 total letters Query= NC_014767.1 Length=184095 Score E Sequences producing significant alignments: (Bits) Value seq1963 154 2e-32 >seq1963 Length=539952 Score = 154 bits (170), Expect = 2e-32 Identities = 1002/1589 (63%), Gaps = 47/1589 (3%) Strand=Plus/Plus Query 109507 GACTGAGACTGATCGATGAATCGACCACGATCAGCCGCCATGTCGATGATACACTTTTGG 109566 ||||| ||||| ||||||||| |||||| ||||| ||||| | | ||| | | || Sbjct 428993 GACTGGGACTGGTCGATGAATGCACCACGGTCAGCAGCCATCTGCACAATAGTCCTCTGA 429052 Query 109567 CTAATTTCCCAGACAGTCTTGTACAAATTCTTGATATCATCGGGAATGTCCACGATGTTT 109626 |||||||| || |||||||||| |||||| ||| | || ||| ||||| Sbjct 429053 GAGATTTCCCAAACGGTCTTGTACAGGGCCTTGATGTCAGCCGGGATGCTGGGAATGTTC 429112 Query 109627 TGAATAGAGCCACCAGCCTTCACCATGAGA---TCCTTCATCTCTTTCGACCAGAGACCG 109683 || || || |||| ||| | |||| | | |||||| | | ||||| | ||| Sbjct 429113 TGTATGGA---ACCATCCTCGGCGATGATACGGTTCTTCATGGCCTCAGACCACAAGCCG 429169 Query 109684 ACCTTTTTGAGATCGTCAACAAGATGCTTGTTGACCACGACAAATTCACCAGCAAGTGTG 109743 | || | | | || | ||| |||||| || || || ||||| || Sbjct 429170 AGCTCTGTCAAGTCCCTGAGAAGCCAAGGGTTGACAACCTGGAACTCGCCAGCGAGCACA 429229 Query 109744 CGTCGGAGGTAGATGTTAGTCGTGTAGGGTTCGAAACACTCATTGTTGCCTAGGATTTGT 109803 ||||| |||||||||| | ||||| || ||||| ||||| |||||||| ||||| || Sbjct 429230 CGTCGCTGGTAGATGTTGGAGGTGTATGGCTCGAAGCACTCGTTGTTGCCCAGGATCTGC 429289 Query 109804 GCAGTGGAAGCTGTGGGCATGGGAGCCA-TGAGAAGACTGTTTCGGAGACCCTTCGTCTT 109862 | ||||| || |||||||| || |||| | | ||| ||||| |||| ||| || ||| Sbjct 429290 GAGGTGGATGCAGTGGGCATTGGCGCCAGTAACAAG-CTGTTGCGGACACCGGTCTCCTT 429348 Query 109863 TACCCGCTCACGCATTGCGTCCCAATCATAACGACCACTAAATTTAGTCTCACCATCCCA 109922 | | || | || ||||| || | || | | | | || ||| ||| Sbjct 429349 GATCTTGTCCTTGAGGGCTTCCCAGTCCCA--GAGCGCGGAT----GGCTTGACATTCCA 429402 Query 109923 CATATCTGGTTGAAGTACACCCTCAGCAGCAGGAGAACCCTTGAAACTCTCGTACGACCC 109982 ||| || ||||| | |||| | | ||| |||| | | ||| ||||| || Sbjct 429403 CATGTCGAACTGAAGGATGCCCTGTGAGACCGGACTGCCCTCGTACGTCTTGTACGGGCC 429462 Query 109983 CTCAACCTCGGCCAACTCGGATGAAGCCTCTAGTGCCGCATGATACATAGTCTCAAAAAT 110042 ||| |||| ||| | ||| ||| || || || || || || |||||||| || || Sbjct 429463 CTCCACCTTGGCAATATCGCTTGATGCGGTAAGAGCAGCGTGGTAGATAGTCTCGAAGAT 429522 Query 110043 ATGAGCATTCATGAGGCGAGACTCTTCACAGTCGAAGGGAAGACCA----CAAAGAATAA 110098 || |||| || | ||| ||||||| || | || | | ||||| Sbjct 429523 CTGCTTGTTCAGCTCACGGGCCTCGGGGGAGTCGAAAGGCATACGAAGGGCCAAGAA--- 429579 Query 110099 ACACATCCGCTAGACCCTGAACACCGAGACCAATGGGGCGATGCTTCATGTTAGAGC-GT 110157 | |||| || |||||||| ||||| | |||||| || ||||| |||||| | || Sbjct 429580 -CGCATCAGCAAGACCCTGGACACCAACACCAATCGGTCGATGTCGCATGTTGCTGTTGT 429638 Query 110158 CGAGCAGTTTCTACGGGGTAAAAGTTGCGGTCGATGACCCGATTGAGATTCTTCGTCACA 110217 | | || || ||||| |||| || |||| | || || || || Sbjct 429639 AGGCCTCCTTG-ACTGGGTAGTGGTTGACATCAATGATCTTGTTCAGGTTGCGGACGACG 429697 Query 110218 GTCTTCGTGATTTCATGGA---GTTTGTCGTAATCGAACGTTTTCGTCTCCTTATTGACA 110274 || || | ||||| | ||| | || | | | ||| | ||| | | || Sbjct 429698 ACCTGGGTAACCTCATGCAACTGTTGGAAGTTGTAGCA-GTTGTTGTCA--TAGTCCACG 429754 Query 110275 TATTTGGGGAGAGCAATAGACGCAAGATTGCACACAGAAGTCTCGTCTTTGTCGGTGTAT 110334 || || || |||||||| || || ||||| |||| ||| || | | ||| Sbjct 429755 TACGCCGGCAGGGCAATAGAGGCCAGGTTGCAAACAGCGACCTCATCAGGGGCACAGTAC 429814 Query 110335 TCCAAAATTTCCGTACACAAGTTGGAACTCTTAATGACACCCAAGTTCTTCTGATT-CGA 110393 || | || || || || | ||| || || ||| ||||| ||| ||||| || | Sbjct 429815 TCGATGATCTCAGTGCAGAGGTTTGAGCTGCGGATGGTACCCAGGTTTTTCTGGTTGCTC 429874 Query 110394 TTTGGAGTTGCATGCATCCTTATAGAGCATGTATGGGGTACCAGTTTCCGTCTGTGACTT 110453 ||| | | || || || || || |||||| | ||| | ||||| || ||||| | || Sbjct 429875 TTTCGGTTCGCGTGG-TCTTTGTATAGCATGAAGGGGTTGCCAGTCTCGGTCTGAGCCTC 429933 Query 110454 GAGAATGGCCTTCCATA-CATCGGCGGCGGGGACAGT--TGCGTTAGCGAGACCTTCCTC 110510 ||| ||||| | ||| | | || | ||| | || |||| | || | || |||| Sbjct 429934 GAGGATGGCGTACCACAACTTCTG-GGCCTTCATGGTCTTGCG--ACCGCGGCCCTCCTT 429990 Query 110511 CTCGTACTTGGTGTACAAGTCCTCAAATTCCTGTCCGTACACATCAGAAAGACCCTTCGC 110570 ||||||||| ||| | ||||||| |||| ||||| || | ||| || Sbjct 429991 CTCGTACTTCTCGTAGAGAGCCTCAAACTCCTCACCGTAGCAGTCGGCAAGTCCAGGGCA 430050 Query 110571 CTTGTCGGGACAGAAGAGGGACCAATTTCCACCCTCCTCAACCCTCTTCATGAACAGGTC 110630 || | ||| || | ||||| ||| | || || ||| |||| |||||||||||| || Sbjct 430051 CTCATTGGGGCACATGAGGGTCCACTCGCCGTTCTTCTCGACCCGCTTCATGAACAGATC 430110 Query 110631 AGGAATCCACATCGCCGAGAAAAGGTCACGGCAACGAGCCTCTTCATCACCTTGGTTGAG 110690 || ||||| | || |||||| |||||| || ||| || | || ||||| Sbjct 430111 GGGGATCCAGAGTGCAAGGAAAAGATCACGGGCTCGGATCTCCTCCTTGCCGTGGTTCTT 430170 Query 110691 GCGTAGCTCCAAAAAGTCCATGATATCCGAGTGCCATGGTTCGAGATAGACAGCGATGGA 110750 ||| || || | ||| || | || || | ||||||||| || || |||| ||||| || Sbjct 430171 GCGCAGGTCAAGAAACTCGAAGACGTCTGCGTGCCATGGCTCAAGGTAGATAGCGAAGGC 430230 Query 110751 TCCCTTACG---ACGACCCGCCTGGTTAACATAGCGTGCTGTGGCATTGAAGACCCTGAG 110807 || ||| || |||||| ||||| || || || || ||||||| | Sbjct 430231 ACCGGGACGCTTGTTGCCGCCCTGGTCGACATATCGGGCAGTATTGTTAAAGACCCGCAA 430290 Query 110808 CATAGGAATAATTCCATCGGATTGACCATTTGTACCCCTAATTCTGGACTTATTGGCACG 110867 ||| || | || |||| ||| || || ||||| || || ||||||| Sbjct 430291 CATGGGGGTGATGCCATTGGAAGTGCCGTTAGTACCAGCGATGTATGAGCCGGTGGCACG 430350 Query 110868 AATGTCGTGGATATGCATACCAATACCACCCGCCCACTTACTAATTTGTGCACA-CTCTG 110926 || ||||| | | || ||||| |||||| ||| || ||||| ||| Sbjct 430351 GATACGGTGGACGTTGAGGCCGATACCTCCCGCCATCTTGGAGATCATGGCACAGGTCT- 430409 Query 110927 TGAGTGTACCATAAATACCATCAATCGAATCTGCCTTGTTGGCAATTAGAAAGCAAGAAG 110986 |||| || | || || || ||||| || |||| | | | || ||||| || | Sbjct 430410 TGAGCGTGTCGTAGATGCCCTCAATGCTGTCCTCCTTCATATCGACGAGGAAGCACGATG 430469 Query 110987 ACATCTGAGGACGAGGCGTTCCCGCATTGAAGAGTGTAGGTGTCGCATGAATGAACAGAC 111046 ||| ||| || | || || || |||||||| | ||| || | || || ||| ||| Sbjct 430470 ACAGCTGGGGCTGGGGAGTGCCAGCATTGAATAATGTGGGCGAGGCGTGGGTGA--AGAA 430527 Query 111047 CTTG--GGACATCTTGTTGTATGTGTCGA 111073 |||| ||||||| |||||| || |||| Sbjct 430528 CTTGTTGGACATCAGGTTGTACGTCTCGA 430556 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 588958455877400