Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Diaporthe_20ampelina_20[genbank_20GCA_5F001006365.1_202015-05-13] 2,383 sequences; 47,325,858 total letters Query= NC_017940.1 Length=127732 Score E Sequences producing significant alignments: (Bits) Value seq1540 147 2e-30 >seq1540 Length=209369 Score = 147 bits (162), Expect = 2e-30 Identities = 264/381 (69%), Gaps = 10/381 (3%) Strand=Plus/Plus Query 30008 TGTGGCACGGAGGAAGAGCCATGAGGCCCAAGTCTTTGGGGTTCCAGGCGCACACGATGA 30067 |||||||||| || || ||||| || ||| ||||||||| |||| || ||||| Sbjct 103475 TGTGGCACGGCGGCAGCGCCATCTTCTTCAGGTCGGCGGGGTTCCACGCGCTCATGATGA 103534 Query 30068 TGCGCCTGTCTTCTGGGTTGTTCCTGA---TGAGGTCCACGGCGTTTTGC-AGCTGATCC 30123 |||||| ||| | ||||| |||||| || || ||| || || ||||| || Sbjct 103535 TGCGCCGGTCGTACGGGTTCGTCCTGAGCTTGTGGATCACCTCG----GCGAGCTGGTCG 103590 Query 30124 ACCCCCATCCCCGAGTAGTCTGCCCTCATGTCCGTGTACTCTGCTCCGAAATGCCTCCAC 30183 || ||| |||| |||||| |||||| ||| |||||| || ||||| || | |||| Sbjct 103591 ACGCCCTGGCCCGTGTAGTCGGCCCTCGCGTCGACGTACTCGGCCCCGAAGTGGCGCCAC 103650 Query 30184 TGGAACCCGTACACCGGTCCCAGGTCTCCCTCTTCCCTGTGCTCGAAGCCCCTC-TTGTC 30242 ||||||||||| || || |||||||| ||| || | ||| | ||||| | |||| Sbjct 103651 TGGAACCCGTAGACGGGGCCCAGGTCGCCCGGCTCGCGGTG-GCCTAGCCCGACGCTGTC 103709 Query 30243 CAAAAAGTCTCTGGAACCGTTGGCGTCCCAGATCTTTACCCCCTTCTCGGAGAGCTCTTT 30302 | | | || | || |||||| ||||||||||||| || |||| ||| |||||| Sbjct 103710 GAGATACTCGCGCGAGCCGTTGCCGTCCCAGATCTTGACGCCCTGCTCCGAGAGCGAAAG 103769 Query 30303 GGAGTTTGTGGACCCTCTGACGAACCACAGCAGCTCCTCCACGACGGCCTTCCAAAAGAC 30362 || || || | ||||||||||||||| | | || |||||| ||||| Sbjct 103770 CGACGAGGTCTCGCCCGATATGAACCACAGCAGCTCGGCGAGCACCGCCTTCTGGAAGAC 103829 Query 30363 CCTCTTGGTCGTGAGGAGGGG 30383 | ||| || || ||||| || Sbjct 103830 GCGCTTTGTGGTAAGGAGCGG 103850 Score = 96.9 bits (106), Expect = 3e-15 Identities = 138/192 (72%), Gaps = 2/192 (1%) Strand=Plus/Plus Query 29779 GGCTCCCTCTCGAGCTGAGTCTTCAGCGGTTCCACGTGATCCAGGTAGACGTGAGCGTCT 29838 ||||||||||| ||||| | | || | || ||||| ||| ||||||||| ||||| Sbjct 103180 GGCTCCCTCTCCAGCTGCACCCTGAGGGCATCGACGTGGTCCGCGTAGACGTGCGCGTCG 103239 Query 29839 CCCAGGGTGTG-GACAAACTCTCCCGGTTCTAGCCCGGTGACGTGAGCCATCATGTACGT 29897 |||| | ||| | | ||| ||||| || || ||||| || ||||||| || Sbjct 103240 CCCATGACGTGCGTGAGGCTC-CCCGGGATGAGGTCGCACACGTGCGCGATCATGTGTGT 103298 Query 29898 GAGGAGAGAGTAGCTGGCGATGTTAAAGGGTACCCCGAGCCCCATGTCCCCCGACCTCTG 29957 || || |||||||| |||||||| || || || || || |||||||| | || | ||| Sbjct 103299 CAGCAGCGAGTAGCTCGCGATGTTGAACGGCACGCCCAGGCCCATGTCGCAGGAGCGCTG 103358 Query 29958 GTAGAGCTGACA 29969 ||| ||||| || Sbjct 103359 GTACAGCTGGCA 103370 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 408605732595659