Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Diaporthe_20ampelina_20[genbank_20GCA_5F001006365.1_202015-05-13] 2,383 sequences; 47,325,858 total letters Query= NC_018875.1 Length=119082 Score E Sequences producing significant alignments: (Bits) Value seq1808 114 1e-20 >seq1808 Length=99283 Score = 114 bits (126), Expect = 1e-20 Identities = 156/218 (72%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 48549 AGCCGCAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGATAGACTTCGA 48608 || || | |||||| || |||||| ||| || ||||| ||||| ||||| | | | || Sbjct 19332 AGACGGAGCACCAAGTGCAGCGTGGACTCCTTCTGAATGTTGTAGTCAGACAAAGTCCGG 19391 Query 48609 TCGTCGTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGAACGCCCTCC 48668 |||| |||| |||||| || || || || ||||| || || || | || | ||||||| Sbjct 19392 CCGTCTTCCAGCTGCTTGCCAGCGAAAATGAGTCGTTGCTGGTCTGGTGGGATGCCCTCC 19451 Query 48669 TTGTCGCTAATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACCTCCACCGTA 48728 ||||| |||||| || || | | | || || | ||| ||||| | |||| Sbjct 19452 TTGTCCTGAATCTTCGACTTGACGTTGTCAATCGTGTCCGATGACTCAACCTCGAGCGTA 19511 Query 48729 ATCGTTTTTCCCGTCAAAGTTTTTACAAAAATCTGCAT 48766 || || || |||||||| || || |||||||||||||| Sbjct 19512 ATAGTCTTCCCCGTCAAGGTCTTCACAAAAATCTGCAT 19549 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 380926536500709