Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Diaporthe_20ampelina_20[genbank_20GCA_5F001006365.1_202015-05-13] 2,383 sequences; 47,325,858 total letters Query= NC_019491.1 Length=291144 Score E Sequences producing significant alignments: (Bits) Value seq1963 369 7e-97 seq1786 154 3e-32 >seq1963 Length=539952 Score = 369 bits (408), Expect = 7e-97 Identities = 1202/1848 (65%), Gaps = 62/1848 (3%) Strand=Plus/Plus Query 212574 GCAGCAGCCTTGGTGCGTAGATAGTACATGCCGGTCTTTAGGCC---CTTGCCCCAGCCG 212630 ||||| |||| ||||| || ||||||||||| ||||| ||||| ||| ||||||| Sbjct 428879 GCAGCTGCCTGAGTGCGGAGGTAGTACATGCCAGTCTTGAGGCCGAGCTT---CCAGCCG 428935 Query 212631 TGCATGTGCATTGCTG-TGAGTTTCTTCAGCTTAATATTCTGGTCATC-CTCGTGGCCCA 212688 | ||||| |||| ||| |||| || | ||| | | |||| || Sbjct 428936 GCGAAATGCAT-GCTGGTGA---TCTT--GCCCA------TGGACGGCTCTCG-----CA 428978 Query 212689 GATGTAGGTTCAGGGACTGACTCTGGTCTATGAATGGGGCCCTGTCAGCGGCCATGTCTA 212748 || | ||| || ||||| |||||| ||||||| | | |||||| ||||| | | Sbjct 428979 TGTGGATGTTGAGTGACTGGGACTGGTCGATGAATGCACCACGGTCAGCAGCCATCTGCA 429038 Query 212749 TGATATCTCTCTGGGAGAGCTCCCACACGGTCTTGAAGATTTCTTTGAGGTCCTCTGGGA 212808 ||| ||||| |||| ||||| ||||||||| | | | |||| ||| | |||| Sbjct 429039 CAATAGTCCTCTGAGAGATTTCCCAAACGGTCTTGTACAGGGCCTTGATGTCAGCCGGGA 429098 Query 212809 AGCCGGGGATGTTCTGCACAGACCC--CCTGTGT-ATGGTCAGCTGCAGGCGCATGTCCT 212865 || ||| |||||||| | || || ||| | ||| | | | | |||| ||| Sbjct 429099 TGCTGGGAATGTTCTGTATGGAACCATCCTCGGCGATGATACGGTTCTT---CATGGCCT 429155 Query 212866 CGTTCCAGAGGCCCCTGGTCTC-CAGGCACTTGACCAGGTGAGGGTTGACTATCTGGAAG 212924 | ||| | ||| | ||| || | | ||| || ||||||||| | |||||| Sbjct 429156 CAGACCACAAGCCGA-GCTCTGTCAAGTCCCTGAGAAGCCAAGGGTTGACAACCTGGAAC 429214 Query 212925 TCACCTGAGAGCACCCTCCTCTGGTAAAAGTTTGAAGTGTAGGGCTCGATGCTCTCGTTG 212984 || || | |||||| | | |||||| | ||| || ||||| ||||||| || ||||||| Sbjct 429215 TCGCCAGCGAGCACACGTCGCTGGTAGATGTTGGAGGTGTATGGCTCGAAGCACTCGTTG 429274 Query 212985 TTCCCCAGAATCTGTGCAGTGCTGGCTGTGGGCATGGGAGCCACCAGGAGACTGTTCCTC 213044 || ||||| ||||| | ||| || |||||||| || |||| | | ||||| | Sbjct 429275 TTGCCCAGGATCTGCGAGGTGGATGCAGTGGGCATTGGCGCCAGTAACAAGCTGTTGCGG 429334 Query 213045 ACTCCGTGCTCGCCGATGAGGCGCCGAAGCTCTGCCCAGTCCCATCTGCCAGACAGGTCC 213104 || ||| ||| ||| | | || || |||||||||| | || | Sbjct 429335 ACACCGGTCTCCTTGATCTTGTCCTTGAGGGCTTCCCAGTCCCAGAGCGCGGATGG---- 429390 Query 213105 TCGTCCTTCACGTTCCACATGTCAAACTGCAAGATGCCTTTGCTCACGGGGCTGCCCTGG 213164 ||| || ||||||||||| ||||| | |||||| | || || ||||||| | Sbjct 429391 -----CTTGACATTCCACATGTCGAACTGAAGGATGCCCTGTGAGACCGGACTGCCCTCG 429445 Query 213165 TAAGAGGAGTAGGGGCCATGCTCCTTGGCCAGCTCGCAGGACGCCTGCAGGGCAGCGTAG 213224 || | ||| ||||| | | ||||||| | |||| || || || ||||||| | Sbjct 429446 TACGTCTTGTACGGGCCCTCCACCTTGGCAATATCGCTTGATGCGGTAAGAGCAGCGTGG 429505 Query 213225 TAGATGGTTTCAAATATCTCCCTGTTGAGCTTCTTGGCCTCTGGGGACGTGAAGGGCATC 213284 ||||| || || || |||| | |||| |||| |||||| ||||| ||| ||||| Sbjct 429506 TAGATAGTCTCGAAGATCTGCTTGTTCAGCTCACGGGCCTCGGGGGAGTCGAAAGGCATA 429565 Query 213285 ATCATGCGTTGGAACACATCAGCCAGCCCCTGGACCCCGATGCCGATGGGTCTGTGTCTC 213344 | | |||| ||||||| || |||||||| || | || || |||| |||| | Sbjct 429566 CGAAGGGCCAAGAACGCATCAGCAAGACCCTGGACACCAACACCAATCGGTCGATGTCGC 429625 Query 213345 AGGTTAGACTTGGAGCACTCCTCCAAGGGGTAAAAGTTGCAGTCGATGATCTTGTTGAGG 213404 | ||| ||| || ||||| | ||||| |||| || ||||||||||| ||| Sbjct 429626 ATGTTGCTGTTGTAGGCCTCCTTGACTGGGTAGTGGTTGACATCAATGATCTTGTTCAGG 429685 Query 213405 TTGCGGGTGGCCACTTTGGTGACATGGGCCAGGTACTCGTGATTGAACACGTAGCCCCCG 213464 |||||| | | || | ||| || | || | | | ||| | || | | Sbjct 429686 TTGCGGACGACGACCTGGGTAACCTCATGCAACTGTTGGAAGTTGTAGCAGTTGTTGTCA 429745 Query 213465 TCCTGCACAAACTCAGGCAGGGCGATGCTGGCCAGGTTGCAAACGGCCACCTCCTGAGAG 213524 | | ||| || | |||||||| || ||||||||||||||| || ||||| | || | Sbjct 429746 TAGTCCACGTACGCCGGCAGGGCAATAGAGGCCAGGTTGCAAACAGCGACCTCATCAGGG 429805 Query 213525 TCTGTGTACTCCATGATCTCGGTGCACAGGTTGCTGCATCGGATGGTGCCCAGGTTCTGG 213584 | |||||| |||||||| ||||| ||||| || |||||||| |||||||| | Sbjct 429806 GCACAGTACTCGATGATCTCAGTGCAGAGGTTTGAGCTGCGGATGGTACCCAGGTTTTTC 429865 Query 213585 TGGTTTGACTTTGCGTTGGCAGAATCCTTGTAGAGCATGTAGGGGGACCCGGTCTCTAGC 213644 ||||| |||| ||| || || ||||| |||||| ||||| || ||||| | Sbjct 429866 TGGTTGCTCTTTCGGTTCGCGTGGTCTTTGTATAGCATGAAGGGGTTGCCAGTCTCGGTC 429925 Query 213645 TGGGACACCAGTATCTGGCTCCAGAGGTACCTGGCCTTGACCACCCGCCTGACAGCTCCG 213704 || | | | || || | ||| | | | |||||| | | | ||| || | Sbjct 429926 TGAGCCTCGAGGATGGCGTACCACAACTTCTGGGCCTTCATGGTCTTGC-GACCGCGGCC 429984 Query 213705 GGCGTAGCCTCGTACTGTTCGTAGAGCTCGTTGAATTCGTGGCCCCAGACCCTGTCCAGT 213764 | | |||||||| |||||||| | | || || | || || | | ||| Sbjct 429985 CTCCTT--CTCGTACTTCTCGTAGAGAGCCTCAAACTCCTCACCGTAGCAGTCGGCAAGT 430042 Query 213765 CCCGGACAGGATGCGGGACACATGAGGCTCCAGTCCCCGT-CATCTCTGACTCTCTGCAT 213823 || || || ||| ||||||||| |||| || |||| | |||| ||| | || ||| Sbjct 430043 CCAGGGCACTCATTGGGGCACATGAGGGTCCACTCGCCGTTCTTCTC-GACCCGCTTCAT 430101 Query 213824 GAACAGGTCCGGGACCCACAGCGCGGTGAACAGGTCCCTGGTCCTCCTCTCGTCCACTCC 213883 |||||| || |||| ||| || || ||| || || | || | |||| ||| || Sbjct 430102 GAACAGATCGGGGATCCAGAGTGCAAGGAAAAGATCACGGGCTCGGATCTCCTCCTTGCC 430161 Query 213884 AGAGTTTTTGCGCAGATCTAGAAAGTCAAAGATGTCCGCGTGCCACGGCTCCATGTAGAT 213943 ||| |||||||| || ||||| || |||| ||| |||||||| ||||| | |||||| Sbjct 430162 GTGGTTCTTGCGCAGGTCAAGAAACTCGAAGACGTCTGCGTGCCATGGCTCAAGGTAGAT 430221 Query 213944 GGCAAAGGCGCCCGGCCTCTTG---CCGCCCTGGTCCACCAGCCTGGCCACCATGTTGAA 214000 || ||||| || || | |||| ||||||||||| || | ||| |||| || Sbjct 430222 AGCGAAGGCACCGGGACGCTTGTTGCCGCCCTGGTCGACATATCGGGCAGTATTGTTAAA 430281 Query 214001 GATGCGCAGGACGGGTACCAGCCCGTTGGACTGTCCGTTGGTTCCCGCTATATACGAGCC 214060 || |||| | ||| | || ||||| ||||| || || || || || ||||| Sbjct 430282 GACCCGCAACATGGGGGTGATGCCATTGGAAGTGCCGTTAGTACCAGCGATGTATGAGCC 430341 Query 214061 GGAGGCCCTCA---GGTTGCTCATGGAGAGCCCTATGCCACCGGCGTACTTGGAGATCAT 214117 || ||| | | ||| | | | ||| || || || || || |||||||||||| Sbjct 430342 GGTGGCACGGATACGGTGG---ACGTTGAGGCCGATACCTCCCGCCATCTTGGAGATCAT 430398 Query 214118 GGCGCAGCGCCTCACAGTCTCCATGATGCCGGCCATGCTGTCATCTGTGAGGTTCAGCAA 214177 ||| ||| | | | || || |||||| | |||||||| || | | | | | Sbjct 430399 GGCACAGGTCTTGAGCGTGTCGTAGATGCCCTCAATGCTGTCCTCCTTCATATCGACGAG 430458 Query 214178 GAAGCAGCTCGAGAGCTGGGGCCTGGACGAGCCAGAGTTGAAAAGCGTGGGGCTGGCATG 214237 |||||| || ||||||||| || | ||||| ||||| | ||||| ||| || Sbjct 430459 GAAGCACGATGACAGCTGGGGCTGGGGAGTGCCAGCATTGAATAATGTGGGCGAGGCGTG 430518 Query 214238 GATCATAAACTTGTTAGAGAGGAGCCTGTAGGTCTCCAGGACTGAGGGGATGTCGTGCTT 214297 | | | |||||||| || | || |||| ||||| | |||| || ||| | Sbjct 430519 GGTGAAGAACTTGTTGGACATCAGGTTGTACGTCTCGATGACTCTCTCGACGTCATCTCC 430578 Query 214298 GTGGATCTGTAGAGCGCACCTCATCAGCATGTGCTGGGGCCTCTCTATGGGTCCTTT--- 214354 ||| | |||| | ||| | |||||| || |||| ||| | | |||| Sbjct 430579 CCAGATGCCGACAGCGACACGCATGATCATGTGTTGTGGCCGCTCGACG---ACTTTACC 430635 Query 214355 GGGGCCCTTGAGCAGGTAGGAGCGCTCCAGAGTCTTGAACCCAAAGTA 214402 | | ||| |||||||| |||||||| || |||||||| || ||||| Sbjct 430636 GTCGAGCTTCAGCAGGTATGAGCGCTCGAGGGTCTTGAAGCCGAAGTA 430683 >seq1786 Length=271448 Score = 154 bits (170), Expect = 3e-32 Identities = 300/437 (69%), Gaps = 7/437 (2%) Strand=Plus/Minus Query 47839 CTGGTAGTCCCCCACTCTATTCTCAAAGAAGTTTGTCTTCCCCTCCAACGAGATGTTCTC 47898 ||||||||| || || | ||||| |||||||| ||||| || | | ||||||||||| Sbjct 165767 CTGGTAGTCACCGACACGCTTCTCGAAGAAGTTGGTCTTGCCACCGAGGGAGATGTTCTC 165708 Query 47899 CATGAAGAGGAAGGGGTTGGGTGTGTTATACACCCGTGTC-AGGCCCATCTGTTCCAGCA 47957 ||||||| ||||||||||| | || || | || |||| ||||| |||| | Sbjct 165707 CATGAAGTCGAAGGGGTTGGACGACTTGTA-AACCTTGTCGTTGCCCAGGGCGACCAGGA 165649 Query 47958 GGTGATCCGCGACGTACTCGATGTATTTTGACATGAGGGTGATGTTCATGCCTATGAGGG 48017 || | || ||||| | |||||||| | ||||||| | ||||||||| | ||||| Sbjct 165648 GGCGGTCGGCGACAAATTCGATGTACTGCTTCATGAGGTTAGAGTTCATGCCGAGGAGGG 165589 Query 48018 -ACACGGGCAAAGCCTTTGTGAGAAACTCCTTCTCTATCTGCACGGCTTCCCCCACAATC 48076 ||| |||| ||||| || | ||| |||||||| || || || || | || Sbjct 165588 CACA-TGGCAGAGCCTCGGTCAAAAATTCCTTCTCGATGGCGACAGCCTCGGTGATGATG 165530 Query 48077 TGCTTAACGCGGGACTCTGAGGGTTTGTTGCGCAGGTGCTTGGCATAGAGCATGCAGGCA 48136 | || ||||| || ||| ||| ||||| || | |||| ||||| Sbjct 165529 TCCTGGACGCGCTGCTTGCTTGGTCGGTTCTTGAGGTG---GGAGAACAGCAGACAGGCG 165473 Query 48137 AAGTCCCTGTGCAAGCCTTCGTCCCGGCTGATGAGCACGTTGGAGAAGCAGAGACCAGGC 48196 ||||| |||||| || || || || ||| || ||||||||||| || |||||| Sbjct 165472 AAGTCGGTGTGCAGACCCTCATCACGAGAGATCAGTTCGTTGGAGAAGGTCAGGCCAGGC 165413 Query 48197 ATGACCCCCCTCTGTTTGAGCCAGAAAATTGCCGCGAAAGAGCCAGAGAAGAAGATGCCC 48256 |||| ||| | || ||||||||||| || | ||||| | ||| ||||||||| ||| Sbjct 165412 ATGAGCCCACGCTTCTTGAGCCAGAAGATGGAAGCGAATGCGCCGCTGAAGAAGATACCC 165353 Query 48257 TCCACTGCCGCGAACGC 48273 || || || || || || Sbjct 165352 TCGACGGCGGCAAAGGC 165336 Score = 93.3 bits (102), Expect = 8e-14 Identities = 173/251 (69%), Gaps = 5/251 (2%) Strand=Plus/Minus Query 48429 TCTCAGAGTGCACATTCTCTATAGCGATCTGGAACCCGTAGAAGGCCCTGGCCTCAAACA 48488 |||| ||||| | ||||| || ||||||||| ||||||||| | ||||| | Sbjct 165124 TCTCTGAGTGGATGTTCTCCATCATGATCTGGAAGCCGTAGAAGCATCGAGCCTCGGGGA 165065 Query 48489 CCTGCACTTCTGTGGAGAATCTCTCCAGCAGATTCTCATTGACTATCCCATCTGAAGCAG 48548 ||| || || | ||| | ||||| || ||||| ||||| || ||||||||||||| Sbjct 165064 TCTGAACCTCGCCGCTGAACCGCTCCACGAGGTTCTCGTTGACGATTCCATCTGAAGCAG 165005 Query 48549 CAAAGAAGGCAAGGACATGTTTAAGGAAATGGCGCTCGTTGTGGGTGAGAGCAT---TCC 48605 | |||||||| |||| || | |||| || |||| || ||| ||| | ||| Sbjct 165004 CGAAGAAGGCGAGGATGTGGGACACAAAATACCGTTCGTCGTCGGTCAGACGGTTGCTCC 164945 Query 48606 AGCCCTGTACGTCTTTGCCCAGGTCCACTTCTTCCACAGTCCAGAAGGACGC-GAGTGCT 48664 || | || | ||| ||| || || | || || |||||||||| || || |||| Sbjct 164944 AGTCGTGCATGTCCTTGGAGAGATCAATCTCCTCGGCAGTCCAGAAAGAAGCTTCGTGC- 164886 Query 48665 TTTTTGTACAT 48675 || |||||||| Sbjct 164885 TTCTTGTACAT 164875 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 931505051966720