Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Diaporthe_20ampelina_20[genbank_20GCA_5F001006365.1_202015-05-13] 2,383 sequences; 47,325,858 total letters Query= NC_020104.1 Length=1021348 Score E Sequences producing significant alignments: (Bits) Value seq1808 102 5e-16 >seq1808 Length=99283 Score = 102 bits (112), Expect = 5e-16 Identities = 154/219 (70%), Gaps = 0/219 (0%) Strand=Plus/Plus Query 480551 ACGAAGACGGAGTACAAGATGAAGTGTACTTTCTTTAGAAACATTATAATCAGCTAGAGT 480610 ||| |||||||| || || ||||| || ||| || || || || || | || || Sbjct 19784 ACGCAGACGGAGAACGAGGTGAAGGGTGGATTCCTTCTGAATGTTGTAGTCGGAGAGGGT 19843 Query 480611 TCTGTTATCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGTTGATCAGGAGGAATTCC 480670 | | ||| || |||||||| |||||||| || || || ||||| ||||| || || || Sbjct 19844 ACGGCCATCCTCGAGTTGCTTGCCAGCAAAGATCAGGCGCTGTTGGTCAGGGGGGATACC 19903 Query 480671 TTCCTTGTCTTGAATCTTTTGTTTGACAGCTTCAATAGTATCAGTGTGTGAAGTTTCAAG 480730 |||||||| |||||||| ||||| ||||||||||| | | | || || Sbjct 19904 CTCCTTGTCCTGAATCTTGGACTTGACGTTGTCAATAGTATCGGAGGACTCAACCTCGAG 19963 Query 480731 GGTAATAGTTTTACCGGTGAGAGTCTTAACGAAAATTTG 480769 || || || || |||||||| ||||| ||||| || || Sbjct 19964 AGTGATGGTCTTGCCGGTGAGGGTCTTTACGAAGATCTG 20002 Score = 96.9 bits (106), Expect = 2e-14 Identities = 155/220 (70%), Gaps = 2/220 (1%) Strand=Plus/Plus Query 480551 ACGAAGACGGAGTACAAGATGAAGTGTACTTTCTTTAGAAACATTATAATCAGCTAGAGT 480610 ||| || ||||| || || ||||||||| ||| || || || || || | || || Sbjct 19556 ACGGAGGCGGAGAACCAGGTGAAGTGTAGATTCCTTCTGAATGTTGTAGTCCGAGAGGGT 19615 Query 480611 TCTGTTATCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGTTGATCAGGAGGAATTCC 480670 | || ||||| |||||||||||||| || | || || || |||||||| || || Sbjct 19616 CCGCCCGTCCTCAAGCTGCTTTCCAGCAAAGATCAAGCGCTGCTGGTCAGGAGGGATGCC 19675 Query 480671 TTCCTTGTCTTGAATCTTTTGTTTGACAGCTTCAATAGTATCAG-TGTGTGAAGTTTCAA 480729 ||||| || || ||||| || ||| || |||||||||| | | || || | Sbjct 19676 CTCCTTATCCTGGATCTTCGACTTCACATTGTCGATAGTATCAGAAGACTCAA-CCTCGA 19734 Query 480730 GGGTAATAGTTTTACCGGTGAGAGTCTTAACGAAAATTTG 480769 ||||||| || || || ||||||||||| ||||| || || Sbjct 19735 GGGTAATGGTCTTGCCAGTGAGAGTCTTGACGAAGATCTG 19774 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 3268076981567684