Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Diaporthe_20ampelina_20[genbank_20GCA_5F001006365.1_202015-05-13] 2,383 sequences; 47,325,858 total letters Query= NC_020852.1 Length=186468 Score E Sequences producing significant alignments: (Bits) Value seq1786 98.7 1e-15 >seq1786 Length=271448 Score = 98.7 bits (108), Expect = 1e-15 Identities = 292/445 (66%), Gaps = 4/445 (1%) Strand=Plus/Plus Query 65074 GCCGAGCGCCTTTTTGCGTTTGCGTGTGTGGAGGGTATCTTCTTCTCCGGGTCATTCTGC 65133 ||| |||| || |||| ||||| || ||||||||||||||| ||| ||||| Sbjct 165321 GCCCAGCGACTGGTTGCCTTTGCCGCCGTCGAGGGTATCTTCTTCAGCGGCGCATTCGCT 165380 Query 65134 GCTATTTATTGGTTGAAGAAGCGGGGTCTCATGCCAGGCCTATGCTTCTCAAATGAACTT 65193 | || | ||| | |||||||| || |||||||| ||||| |||||| || ||||| Sbjct 165381 TCCATCTTCTGGCTCAAGAAGCGTGGGCTCATGCCTGGCCTGACCTTCTCCAACGAACTG 165440 Query 65194 ATTTCCCGAGATGAGGGTCTCCACCAGGAGTTTGCCGTGGAGCTCTTC-AAGACTTTGCG 65252 || || || ||||||||||| ||| || || ||| ||| ||| || | | Sbjct 165441 ATCTCTCGTGATGAGGGTCTGCACACCGACTTCGCCTGTCTGCTGTTCTCCCACCTCAAG 165500 Query 65253 TAATAGACCCACTACCGAAACTATCCACGCCATCGTGAAAGAGGCGGTTGAGATTGAGAA 65312 || |||| | | | |||| | |||| | | ||||| || | || ||||| Sbjct 165501 -AACCGACCAAGCAAGCAGCGCGTCCAGGACATCATCACCGAGGCTGTCGCCATCGAGAA 165559 Query 65313 AGGGTTCATCTTGGACGCACTCCCATGTAATCTCATCGGTATGAACTCTGAGAAGATGTC 65372 | || | || || || |||||| ||| |||| ||||||||| | ||| Sbjct 165560 GGAATTTTTGACCGAGGCTCTGCCATGTGCCCTCCTCGGCATGAACTCTAACCTCATGAA 165619 Query 65373 CGAGTACATTGAGTATGTGTCGGATCGTCTCCTCAAACAAGTTGGGGTGCCAC-CCATTT 65431 ||||||| || | ||| | || || ||||| | |||| | || ||| Sbjct 165620 GCAGTACATCGAATTTGTCGCCGACCGCCTCCT-GGTCGCCCTGGGCAACGACAAGGTTT 165678 Query 65432 GGAACGCGAAGAATCCATTTGACTTTATGGAAAACATTAGCCTTGATGGGAAGACCAACT 65491 || || || || || ||||| ||||| ||||| ||| | ||| |||||||||| Sbjct 165679 ACAAGTCGTCCAACCCCTTCGACTTCATGGAGAACATCTCCCTCGGTGGCAAGACCAACT 165738 Query 65492 TCTTTGAGAAGCGAGTTGGGGACTA 65516 |||| |||||||| || || ||||| Sbjct 165739 TCTTCGAGAAGCGTGTCGGTGACTA 165763 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 596551829683040