Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Diaporthe_20ampelina_20[genbank_20GCA_5F001006365.1_202015-05-13] 2,383 sequences; 47,325,858 total letters Query= NC_021858.1 Length=1908524 Score E Sequences producing significant alignments: (Bits) Value seq899 223 4e-52 seq1567 205 1e-46 seq1963 159 4e-33 seq1786 154 2e-31 seq300 134 2e-25 seq2185 109 7e-18 seq721 98.7 1e-14 seq1298 89.7 6e-12 seq1709 86.0 8e-11 >seq899 Length=81686 Score = 223 bits (246), Expect = 4e-52 Identities = 289/397 (73%), Gaps = 8/397 (2%) Strand=Plus/Minus Query 18093 CACCTTTGGCGAGTCGCACGGGGCGGGC-GTCGGCTGCATCATCGACGGCGTGCCGCCGT 18151 || || ||||||||| ||| | || | || ||||||||| |||||||| || || Sbjct 49075 CAGCTATGGCGAGTCCCACTGC-CGCTCTGTGGGCTGCATCGTCGACGGCTGCCCTCCAG 49017 Query 18152 GCATGCCACTGGCCGAGGCCGACATCCAGCCTCAGTTGGATCGGCGCCGACCGGGCCAGG 18211 ||||| | ||| ||||||||||||||||||| ||| || || ||||| ||||||||| Sbjct 49016 GCATGGCCCTGACCGAGGCCGACATCCAGCCGCAGATGACCCGCCGCCGCCCGGGCCAGT 48957 Query 18212 GCGCACTTTCCACGCCGCGCAACGAGCCCGATCGCGTCATCATCCAGTCGGGCACGGAGA 18271 || | | ||||||||||||||| || |||||| |||||||||||||| ||| Sbjct 48956 CGGCCATCACGACGCCGCGCAACGAGAAGGACCGCGTCGAGATCCAGTCGGGCACCGAGT 48897 Query 18272 ACGGCCTCACGCTCGGCTCGCCCGTCGGCCTCTTTGTGGCCAACCGCGACCAGCGGCCCG 18331 |||| |||| |||||| | || ||||||| ||| |||| |||||||| ||| Sbjct 48896 TCGGCATCACCCTCGGCACCCCGATCGGCCTGCGCGTGCTCAACGAGGACCAGCGCCCCA 48837 Query 18332 TCGACT------ATTCCGACATGTGCAAGGTGCCGCGGCCCTCACACGCCGACTACACCT 18385 |||| | || ||| |||| ||||||||||| |||||||||| || | Sbjct 48836 AGGACTACGGCAACGCCACCATCGACAAGTACCCGCGGCCCTCGCACGCCGACTGGACAT 48777 Query 18386 ACATGGCCAAGTACGGCATCAAGGCGTCGTCGGGCGGAGGCCGGTCGTCTGCCCGCGAGA 18445 || | | ||||||||| ||||||| ||||||||||| ||| || |||||||||| Sbjct 48776 ACCTCGAGAAGTACGGCGTCAAGGCCTCGTCGGGCGGCGGCAGGAGCAGCGCCCGCGAGA 48717 Query 18446 CCCTCATGCGCGTCGCCGCCGGCGCGGTCGCCGAGAA 18482 || | |||||||| ||||| || ||||||| || Sbjct 48716 CCATTGGCCGCGTCGCGGCCGGTGCCATCGCCGACAA 48680 Score = 154 bits (170), Expect = 2e-31 Identities = 129/157 (82%), Gaps = 1/157 (1%) Strand=Plus/Minus Query 19047 GACAGCATCGGCGGCACGGTGACGTGCGTGTGTCGCAACGTGCCGGCAGGCCTCGGCGAG 19106 ||||||||||||||||| || || ||||| ||||||| ||| | || || |||||| Sbjct 48444 GACAGCATCGGCGGCACCGTCACCTGCGTCATCCGCAACGCGCCCTCGGGGCTGGGCGAG 48385 Query 19107 CCGTGCTTTGACAAGATCGAGGCCGCGCTCGCCCACGCCATGCTGTCGATCCCGGCCACC 19166 |||||||| |||||||| |||||| ||| ||||||||||||||||| ||||| |||||| Sbjct 48384 CCGTGCTTCGACAAGATGGAGGCCCTGCTGGCCCACGCCATGCTGTCCATCCCCGCCACC 48325 Query 19167 AAGGGATTCGAGATTGGCAGCGGGTT-TGCGGGTGCG 19202 ||||| |||||||| ||| ||| || |||| |||| Sbjct 48324 AAGGGCTTCGAGATCGGCTCCGGCTTCGGCGGCTGCG 48288 >seq1567 Length=46990 Score = 205 bits (226), Expect = 1e-46 Identities = 291/405 (72%), Gaps = 6/405 (1%) Strand=Plus/Plus Query 1573901 GCCCGGCACGGGCAAGACCACGAGCATCGCGTGTCTGGCGCGTGTCCTCTTGGGCGCGGC 1573960 ||| |||| || ||||| || ||| | || |||||||| || | |||| || Sbjct 40855 GCCAGGCATCGGAAAGACGACCAGCGTGCTCTGCCTGGCGCGGCAGCTGCTCGGCGACGC 40914 Query 1573961 CGCCGACGAGGCCGTGCTCGAACTCAACGCGTCGGACGAGCGCGGCGTCGACGTCGTGCG 1574020 | | | ||||| || || || |||||||| ||||||||||| ||| ||||||| ||||| Sbjct 40915 CTACAAGGAGGCTGTCCTGGAGCTCAACGCCTCGGACGAGCGGGGCATCGACGTGGTGCG 40974 Query 1574021 CAAGATCATCAAGCACCACGCCTCCAAGAGGATCGACCTGCCGCCCGGACGCCACAAGGT 1574080 ||| |||||| | ||| |||| | || |||||| |||| ||||||||| | Sbjct 40975 CAACCGGATCAAGGGCTTCGCGCAGAAGAAGGTCACACTGCCGGCCGGCCGCCACAAGAT 41034 Query 1574081 GATCATCCTCGACGAGGCCGACTGCCTCACGTCGGCGGCCCAGCAGGCCCTGCGGTCCAC 1574140 ||||||| |||||||||||| || | ||||||| || |||||||| |||||| ||| Sbjct 41035 CGTCATCCTGGACGAGGCCGACAGCATGACGTCGGGCGCGCAGCAGGCGCTGCGGCGCAC 41094 Query 1574141 CATGGAAAAGCACACCAACACGACGCGCTTTGCCCTGGCGTGCAACACGTCGTCGATGGT 1574200 ||||| | || |||||||||||||||| ||| | || |||||| ||| | | | Sbjct 41095 GATGGAGATCTACTCCAACACGACGCGCTTCGCCTTCGCATGCAACCAGTCCAACAAGAT 41154 Query 1574201 CATCGAGGCCCTCCAAAGTCGC--TGCGCCATTCTGCGCTTTGTGCGCCTGGGTGACGCC 1574258 ||||||| | || | |||||| ||||| || ||||| | | ||||||| |||| | Sbjct 41155 CATCGAGCCGCTGC--AGTCGCGGTGCGCGATCCTGCGGTACGCGCGCCTGACGGACGGC 41212 Query 1574259 CAGATACGCGCGCGCCT-ATGCGATATTGTCGCCGCCGAAAAGGT 1574302 ||| | | |||||| |||| | || ||| ||||| ||||| Sbjct 41213 CAGGTCGTCAAGCGCCTGATGC-AGATCATCGAGGCCGAGAAGGT 41256 >seq1963 Length=539952 Score = 159 bits (176), Expect = 4e-33 Identities = 329/491 (67%), Gaps = 15/491 (3%) Strand=Plus/Plus Query 1630062 GCACTGGTCGACGTAGCGCGCCGTGTCGTTAAAGACGCGGAGCATGGGCACGAGGCCGTT 1630121 || ||||||||| || || || || | ||||||||| || | |||||| || ||| || Sbjct 430249 GCCCTGGTCGACATATCGGGCAGTATTGTTAAAGACCCGCAACATGGGGGTGATGCCATT 430308 Query 1630122 GGACTCGCCGTTGGTGCCCGCCACGTAGGCGCCGGCGGCGCGCACCTTGTGCGCGGCAAA 1630181 ||| |||||| || || || | ||| | ||||| ||| || | ||| || | Sbjct 430309 GGAAGTGCCGTTAGTACCAGCGATGTATGAGCCGGTGGCACGGATACGGTGGACGTTGAG 430368 Query 1630182 GCCGATGCCGCCGGCCGACTTGGAGATGAGCGCGCACTGTTTGAGCGTGTCGTAGATGCC 1630241 |||||| || || ||| ||||||||| | || || |||||||||||||||||||| Sbjct 430369 GCCGATACCTCCCGCCATCTTGGAGATCATGGCACAGGTCTTGAGCGTGTCGTAGATGCC 430428 Query 1630242 CTCGATCGAGTCGGCCTTCATGTCCACGAGAAAGCACGACGAGTTTTGCGGGTGCGCCGT 1630301 ||| || ||| ||||||| || ||||| |||||||| || || || || | || Sbjct 430429 CTCAATGCTGTCCTCCTTCATATCGACGAGGAAGCACGATGACAGCTGGGGCTGGGGAGT 430488 Query 1630302 GCCGGCGTTGAAGAGCGTGGGCGTCGCCGCGGTGAACAACTGCCGCGACATGGCGTCGTA 1630361 ||| || ||||| | ||||||| || |||||| |||| ||||| || ||| Sbjct 430489 GCCAGCATTGAATAATGTGGGCGAGGCGTGGGTGAAGAACTTGTTGGACATCAGGTTGTA 430548 Query 1630362 GGTGGCGAGCACGCGCGCCAGCGCATCGTCCACGTCGGCAAACCCATAGTGGCCGATGGC 1630421 || ||| || | | || |||| || || || ||||| || Sbjct 430549 CGTCTCGATGACTCTC------------TCGACGT---CATCTCCCCAGATGCCGACAGC 430593 Query 1630422 GACGCGCATGAGCATGTACTGGGGCCGCTCGACGACGACGCCGCGCACCTTGGTCAGGTA 1630481 ||| ||||||| ||||| || |||||||||||||| ||| | ||| |||||| Sbjct 430594 GACACGCATGATCATGTGTTGTGGCCGCTCGACGACTTTACCGTCGAGCTTCAGCAGGTA 430653 Query 1630482 GGACCGGCGCATGGTCATGAGGCCAAAGTAGGAAAAGGCAAAATCGCGGTCGTGGCGGAT 1630541 || || | |||| ||| ||| ||||| || | ||||||||||| | | || Sbjct 430654 TGAGCGCTCGAGGGTCTTGAAGCCGAAGTATTGGTAGCCGAAATCGCGGTCATAGACAAT 430713 Query 1630542 GGCGGCGTCGA 1630552 ||| | ||||| Sbjct 430714 GGCCGAGTCGA 430724 Score = 91.5 bits (100), Expect = 2e-12 Identities = 283/442 (64%), Gaps = 6/442 (1%) Strand=Plus/Plus Query 1628162 ACTGGACGATCTCGGTGCACAGGTTGGCCGACGTCG-TCGTACCCAGGTTCTGCTGGTTG 1628220 ||| || |||||| ||||| ||||| | | | | | ||||||||||| | ||||||| Sbjct 429813 ACTCGATGATCTCAGTGCAGAGGTTTGA-GCTGCGGATGGTACCCAGGTTTTTCTGGTTG 429871 Query 1628221 GTGGTCAGGTTGACGGCGTCCTTGTGGAGCATGTAGGGCGCGCCGGTCTCGATCTGCGCC 1628280 | | |||| || ||| |||| |||||| |||| ||| |||||| |||| ||| Sbjct 429872 CTCTTTCGGTTCGCGTGGTCTTTGTATAGCATGAAGGGGTTGCCAGTCTCGGTCTGAGCC 429931 Query 1628281 GCGACGATGGCCGACCAGATCTGGCGCGCGGGCACGACAGTCCGCGCGCGGCCCTNNNNN 1628340 ||| |||||| |||| | || | || || | | || ||||||||| Sbjct 429932 TCGAGGATGGCGTACCACAACTTCTGGGCCTTCATGGTCTTGCGACCGCGGCCCTCCTTC 429991 Query 1628341 NNNNNNNNNNNNNNNNNNNNNTCAAAGGCCGCGCCGTAGCACTCGTGCAGGCCGGGCGCC 1628400 ||||| || | |||||||| ||| || || || | Sbjct 429992 TCGTACTTCTCGTAGAGAGCCTCAAACTCCTCACCGTAGCAGTCGGCAAGTCCAGGGCAC 430051 Query 1628401 TCGGACGGACAAAAGAGCGACCAGTCGCCACCGGTCACCGCGCGGCGCATAAAGAGGTCA 1628460 || || || | ||| | ||| ||||| || | | || ||| || || || Sbjct 430052 TCATTGGGGCACATGAGGGTCCACTCGCCGTTCTTCTCGACCCGCTTCATGAACAGATCG 430111 Query 1628461 CACGTCCACAGTGC--GTAAAAGAGGTCGCGCGCCCGGTTCTCCTCCTTGCCGTGGTTCT 1628518 |||| ||||| | |||||| || || || ||| ||||||||||||||||||||| Sbjct 430112 GGGATCCAGAGTGCAAGGAAAAGA--TCACGGGCTCGGATCTCCTCCTTGCCGTGGTTCT 430169 Query 1628519 TTTTGAGGTCGAGCCAGTCGACAATGTCGGCGTGCCACGGCTCCAGGTAGCAGGCAAAGG 1628578 | ||||| || | |||| | ||| |||||||| ||||| |||||| || |||| Sbjct 430170 TGCGCAGGTCAAGAAACTCGAAGACGTCTGCGTGCCATGGCTCAAGGTAGATAGCGAAGG 430229 Query 1628579 CGCCCTTGCGCTTGCCGCCGCC 1628600 | || |||||| |||||| Sbjct 430230 CACCGGGACGCTTGTTGCCGCC 430251 >seq1786 Length=271448 Score = 154 bits (170), Expect = 2e-31 Identities = 185/250 (74%), Gaps = 1/250 (0%) Strand=Plus/Minus Query 868691 GCCTTGGCGTACTCGCCCACGCGCCGCTCGAAAAAGTTGGTCTTGCCCTCGAGCGAGATC 868750 ||||| ||| || || || ||| |||||| |||||||||||||| |||| ||||| Sbjct 165772 GCCTTCTGGTAGTCACCGACACGCTTCTCGAAGAAGTTGGTCTTGCCACCGAGGGAGATG 165713 Query 868751 AACTCCATCCACGGGAACGGGTTGGGCGTCTTGTAGTGCTTTTCGCATCCGAGCGACGCG 868810 |||||| | ||| ||||||| || |||||| ||| ||| || || | | Sbjct 165712 TTCTCCATGAAGTCGAAGGGGTTGGACGACTTGTAAACCTTGTCGTTGCCCAGGGCGACC 165653 Query 868811 AGCAGGCGGTCGGCGACAAACTCGATGTACTGGCACATGAGGCCGGCGTTCATGCCGATG 868870 || ||||||||||||||||| ||||||||||| ||||||| | ||||||||||| | Sbjct 165652 AGGAGGCGGTCGGCGACAAATTCGATGTACTGCTTCATGAGGTTAGAGTTCATGCCGAGG 165593 Query 868871 AGCGCCACCGGCAGCGACTCGCTCACAAACTCTTTCTCGATCTCGACGGCCTCGACGATG 868930 || || ||||| | |||| ||| ||| || |||||||| |||| |||||| |||| Sbjct 165592 AGGGCACATGGCAGAGCCTCGGTCAAAAATTCCTTCTCGATGGCGACAGCCTCGGTGATG 165533 Query 868931 ATCTGCCTGG 868940 || | ||||| Sbjct 165532 ATGT-CCTGG 165524 Score = 131 bits (144), Expect = 2e-24 Identities = 146/195 (75%), Gaps = 9/195 (5%) Strand=Plus/Minus Query 869179 ACCTTCGTCGCGACTGATCATTTCGTTGCTAAAGGCGAGGCCGGGCATGAGGCCGCGCTT 869238 ||| || || ||| ||||| ||||||| |||| ||||| |||||||| || ||||| Sbjct 165458 ACCCTCATCACGAGAGATCAGTTCGTTGGAGAAGGTCAGGCCAGGCATGAGCCCACGCTT 165399 Query 869239 CTTGAGCCAAAAGATGGCGCAGAAACTGCCCGAGAAAAAGATGCCCTCGACGGCGGCAAA 869298 ||||||||| ||||||| ||| ||| ||| ||||| ||||||||||||||||| Sbjct 165398 CTTGAGCCAGAAGATGGAAGCGAATGCGCCGCTGAAGAAGATACCCTCGACGGCGGCAAA 165339 Query 869299 GCCGATGAGCCGCTCGGCAAAGGTG---TCGAGGCCCTCCTTGTTGATCCACTTCATCGC 869355 | | | || |||| |||| ||||| ||| || || | ||||||||||| || Sbjct 165338 GGCAACCAGTCGCTGGGCATAGGTGGACTCGCGGTCC------TGGATCCACTTCAGAGC 165285 Query 869356 CCAGTCGGCCTTTTT 869370 |||||||||||| || Sbjct 165284 CCAGTCGGCCTTCTT 165270 >seq300 Length=88049 Score = 134 bits (148), Expect = 2e-25 Identities = 106/127 (83%), Gaps = 0/127 (0%) Strand=Plus/Minus Query 1592168 CTCTTTGAGTTGATCCTCGCCGCCAACTACCTCGACATCAAGCCTCTGCTCGATCTTGGG 1592227 ||||| ||| | ||||| |||||||||||| | ||||||||| ||||||| || | || Sbjct 21271 CTCTTCGAGATCATCCTTGCCGCCAACTACATGGACATCAAGGCTCTGCTTGACGTCGGC 21212 Query 1592228 TGCAAGTCTGTGGCCAACATGATCAAGGGCAAGTCGCCCGAGGAGATCCGCAAGACCTTT 1592287 |||||| | || ||||| ||||||||||||||||| || ||||||||||| ||||| || Sbjct 21211 TGCAAGACAGTCGCCAATATGATCAAGGGCAAGTCTCCTGAGGAGATCCGAAAGACATTC 21152 Query 1592288 AACATCA 1592294 ||||||| Sbjct 21151 AACATCA 21145 >seq2185 Length=187320 Score = 109 bits (120), Expect = 7e-18 Identities = 207/300 (69%), Gaps = 10/300 (3%) Strand=Plus/Minus Query 1852020 TGACCTCGTCGGGATCGTCGAGGCCGATCTTGGAGGCGGCCTCGCTGGCGCTCATCTTGC 1852079 || |||||||| ||| ||| ||||||||||| || |||||||| |||||||| Sbjct 113547 TGGCCTCGTCG---TCGAGCAGGTCGATCTTGGAGTTGGGGTCGCTGGCCGACATCTTGC 113491 Query 1852080 CGCTCTCGGTGAGGCCCGGCACGAGCGGGTTGAGCAGGTGGAAGCGCTTCCGATAGCCGA 1852139 ||| || ||||| ||||| | ||||| | | ||| |||| || ||||| | Sbjct 113490 CGCCCTGC---AGGCCGGGCACCATGGGGTTCATGATGTGCGCCCGCTGGCGGTAGCCCA 113434 Query 1852140 GGACCGGCAGGTGGTCGCGCGCAAAGGCAAATATCTTGCGCTGGTCGCGCCCGCCAAACT 1852199 | |||||| || || || || | |||||||||||| ||||| || | Sbjct 113433 GCTTCGGCAGCCACTCTTTGGCGGCGGTGAAGAGCTTGCGCTGGTCCACGCCGCCGAATT 113374 Query 1852200 GGGCGTCGACGTCGAGGTGCTGCTCGTCGAGGGCCTGCATGAGCGGGTAGAGCACGTTGC 1852259 | |||| ||||| |||| ||||||||| ||| |||||| || |||||| |||| | Sbjct 113373 GCACGTCCACGTCCAGGTACTGCTCGTCCAGGACCTGCAGGACCGGGTACAGCAGCCCGG 113314 Query 1852260 TCAGGAGCGGGTT-GCGGTCCATCTTGACCACCTGAGCGGCGGCCT--TTTGCGCCGTGC 1852316 ||| ||| ||| || || | |||||| |||| ||| |||||| || ||| ||||| Sbjct 113313 ACAGCGGCGCGTTGGCCGT-CTGCTTGACGACCTCGGCGCCGGCCTTCTTGGCGTCGTGC 113255 >seq721 Length=27054 Score = 98.7 bits (108), Expect = 1e-14 Identities = 117/159 (74%), Gaps = 0/159 (0%) Strand=Plus/Minus Query 1254380 GGTCTGGATCTCGCGCGTGCCGATCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGC 1254439 |||||||||||| || | | ||| ||| |||||| || || || | ||| Sbjct 13416 GGTCTGGATCTCCCGGGAGGAGATGGTGGACTTCTTGTTGTAGGCAGCGAGCTTGGAGGC 13357 Query 1254440 CTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTTCATGACCGACATCGACTT 1254499 ||||||| ||| ||| |||| |||||||||||||||||||||| || ||||| | Sbjct 13356 CTCGGTGGCGACGCGCTCGAAGATGTCGTTGACAAACGAGTTCAGGATGGACATGGCACG 13297 Query 1254500 GTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCAC 1254538 ||| ||||| || ||||||||| ||||||||||| || Sbjct 13296 GTTTGAGATACCAGTGTCGGGGTGGACCTGCTTGAGGAC 13258 >seq1298 Length=172817 Score = 89.7 bits (98), Expect = 6e-12 Identities = 91/119 (76%), Gaps = 0/119 (0%) Strand=Plus/Plus Query 344182 GTGGCCTTCCCCACCGAGACCGTCTACGGCCTCGGCGCCGACGCCACGTCTGACGAGGCC 344241 || || |||||||| || || ||||||||||||||||| ||||| || | || ||| Sbjct 7659 GTCGCATTCCCCACAGAAACAGTCTACGGCCTCGGCGCGGACGCGACACGTAGCGGGGCT 7718 Query 344242 GTGCGGCGCATCTTTGAGGTCAAGGGCCGACCCTCCAACAACCCGATCATTGTGCACGT 344300 || | |||||| | | ||||||||| ||||| |||||||| |||| |||||||| Sbjct 7719 GTCAAGGGCATCTACGCCGCCAAGGGCCGGCCCTCGGACAACCCGCTCATCGTGCACGT 7777 >seq1709 Length=126970 Score = 86.0 bits (94), Expect = 8e-11 Identities = 75/93 (81%), Gaps = 3/93 (3%) Strand=Plus/Minus Query 1726966 GTCGAGGTCGGGGTCGCTGGCCAGGCCCTTCCACCCGACGGTCGTGCGCGGCTTTTCGAC 1727025 ||||| ||| |||||| || |||||||||||| ||||| || || || ||||| |||| Sbjct 37773 GTCGACGTCCGGGTCGTTGATCAGGCCCTTCCAGCCGACAGTGGTACGGGGCTTCTCGAG 37714 Query 1727026 ATAGGCGCGCATGACCACGCAAAGCGCGTCGCC 1727058 ||||||||||||| |||||||| |||||| Sbjct 37713 GTAGGCGCGCATGATGACGCAAAG---GTCGCC 37684 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 6106943639860411