Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Diaporthe_20ampelina_20[genbank_20GCA_5F001006365.1_202015-05-13] 2,383 sequences; 47,325,858 total letters Query= NC_022098.1 Length=2473870 Score E Sequences producing significant alignments: (Bits) Value seq1567 201 2e-45 seq1786 147 3e-29 seq2185 140 5e-27 seq1963 131 3e-24 seq300 120 5e-21 seq721 105 1e-16 seq1298 96.9 5e-14 >seq1567 Length=46990 Score = 201 bits (222), Expect = 2e-45 Identities = 358/520 (69%), Gaps = 8/520 (2%) Strand=Plus/Plus Query 2018925 GAAAAGTACCGCCCGACAGTGCTCGACGACATCGTGGGCAACGAGCACGCCGTTGCCTAC 2018984 || || |||||||| | | |||||||||||||| || |||| | || | | | Sbjct 40742 GAGAAATACCGCCCCATCTTCCTCGACGACATCGTCGGAAACGTAGAGACCATCGAGCGC 40801 Query 2018985 CTCAAGGCGCTGGCCGCCGACGGCAACATGCCCAACCTCTTGCTGGCGGGCCCGCCCGGC 2019044 |||||| | || || ||||||||||| | || | | ||| ||| ||| Sbjct 40802 CTCAAGATCATAGCAAAAGATGGCAACATGCCGCATGTCATCATCAGCGGCATGCCAGGC 40861 Query 2019045 ACGGGCAAGACCACGAGCATCGCGTGCCTGGCGCGCGTGCTCTTGGGCGCGGCCGCCGAC 2019104 | || ||||| || ||| | ||||||||||| ||| | |||| ||| | | Sbjct 40862 ATCGGAAAGACGACCAGCGTGCTCTGCCTGGCGCGGCAGCTGCTCGGCGACGCCTACAAG 40921 Query 2019105 GAGGCCGTGCTCGAACTCAATGCGTCAGACGAGCGCGGCGTGGACGTCGTGCGTAGAATC 2019164 ||||| || || || ||||| || || |||||||| ||| | ||||| ||||| | Sbjct 40922 GAGGCTGTCCTGGAGCTCAACGCCTCGGACGAGCGGGGCATCGACGTGGTGCGCAACCGG 40981 Query 2019165 ATCAAG--CATCACGCTTCGAAAAGAA--TCGACCTGCCGCCCGGCCGCCACAAGGTGAT 2019220 |||||| | || ||| | ||||| || |||||| |||||||||||||| | | Sbjct 40982 ATCAAGGGCTTCGCGC----AGAAGAAGGTCACACTGCCGGCCGGCCGCCACAAGATCGT 41037 Query 2019221 CATCCTCGATGAGGCCGACTGCCTTACGTCGGCGGCCCAGCAGGCCCTCCGATCGACCAT 2019280 |||||| || ||||||||| || | ||||||| || |||||||| || || || || Sbjct 41038 CATCCTGGACGAGGCCGACAGCATGACGTCGGGCGCGCAGCAGGCGCTGCGGCGCACGAT 41097 Query 2019281 GGAAAAGTACACCAACACGACGCGGTTTGCGCTGGCCTGCAACACGTCGTCGATGGTCAT 2019340 ||| | ||| ||||||||||||| || || | || |||||| ||| | | |||| Sbjct 41098 GGAGATCTACTCCAACACGACGCGCTTCGCCTTCGCATGCAACCAGTCCAACAAGATCAT 41157 Query 2019341 CGAAGCCCTCCAGAGCCGTTGCGCCATCTTGCGCTTTGCGCGCCTCACCGACGCCCAGAT 2019400 ||| | || ||| || ||||| ||| |||| | |||||||| || |||| |||| | Sbjct 41158 CGAGCCGCTGCAGTCGCGGTGCGCGATCCTGCGGTACGCGCGCCTGACGGACGGCCAGGT 41217 Query 2019401 CGCCGCGCGTCTGCGCGAGATTATCGACGCCGAAAAGGTC 2019440 || | ||| ||| |||| ||||| ||||| |||||| Sbjct 41218 CGTCAAGCGCCTGATGCAGATCATCGAGGCCGAGAAGGTC 41257 >seq1786 Length=271448 Score = 147 bits (162), Expect = 3e-29 Identities = 188/258 (73%), Gaps = 1/258 (0%) Strand=Plus/Minus Query 793891 TGACGCCCGCCTTGGCATACTCGCCCACGCGCCGCTCGAAAAAGTTGGTCTTGCCCTCGA 793950 ||||||| ||||| || || || || ||| |||||| |||||||||||||| ||| Sbjct 165780 TGACGCCAGCCTTCTGGTAGTCACCGACACGCTTCTCGAAGAAGTTGGTCTTGCCACCGA 165721 Query 793951 GCGAGATCAACTCCATCCACGGGAACGGGTTGGCCGTCAGGTAGTGCTTCTCGCACCCGA 794010 | ||||| |||||| | ||| ||||||| || | ||| ||| ||| || | Sbjct 165720 GGGAGATGTTCTCCATGAAGTCGAAGGGGTTGGACGACTTGTAAACCTTGTCGTTGCCCA 165661 Query 794011 GCGACGCAAGCAGGCGGTCGGCGACGAATTCAATGTACTGGCACATGAGGGCGGCGTTCA 794070 | | | || |||||||||||||| ||||| |||||||| ||||||| | ||||| Sbjct 165660 GGGCGACCAGGAGGCGGTCGGCGACAAATTCGATGTACTGCTTCATGAGGTTAGAGTTCA 165601 Query 794071 TGCCGATGAGCGCCACGGGCAGCGACTCGCTGACAAACTCTTTCTCGATCTCGACGGCCT 794130 |||||| ||| || ||||| | |||| | | ||| || |||||||| |||| |||| Sbjct 165600 TGCCGAGGAGGGCACATGGCAGAGCCTCGGTCAAAAATTCCTTCTCGATGGCGACAGCCT 165541 Query 794131 CGATGATGATCTGCCTGG 794148 || ||||||| | ||||| Sbjct 165540 CGGTGATGATGT-CCTGG 165524 Score = 120 bits (132), Expect = 5e-21 Identities = 142/192 (74%), Gaps = 3/192 (2%) Strand=Plus/Minus Query 794340 ACCTTCGTCGCGACTGATCAATTCGTTGCTAAAGCAGAGGCCGGGCATGAGGCCGCGCTT 794399 ||| || || ||| ||||| ||||||| ||| ||||| |||||||| || ||||| Sbjct 165458 ACCCTCATCACGAGAGATCAGTTCGTTGGAGAAGGTCAGGCCAGGCATGAGCCCACGCTT 165399 Query 794400 CTTGAGCCAAAAGATGGCACAGAAACTGCCCGAGAAAAAGATGCCCTCGACGGCGGCAAA 794459 ||||||||| ||||||| | ||| ||| ||| ||||| ||||||||||||||||| Sbjct 165398 CTTGAGCCAGAAGATGGAAGCGAATGCGCCGCTGAAGAAGATACCCTCGACGGCGGCAAA 165339 Query 794460 GCCGACGAGCCGCTCGGCAAAAGTGTCCAGGCCCTCTTTGTTGATCCACTTCATCGCCCA 794519 | | || || |||| |||| | ||| | || || | ||||||||||| ||||| Sbjct 165338 GGCAACCAGTCGCTGGGCATAGGTGGACTCGCGGTC---CTGGATCCACTTCAGAGCCCA 165282 Query 794520 CTCTGCCTTTTT 794531 || ||||| || Sbjct 165281 GTCGGCCTTCTT 165270 Score = 93.3 bits (102), Expect = 7e-13 Identities = 94/120 (78%), Gaps = 2/120 (2%) Strand=Plus/Minus Query 794548 GTGTCGATGGCGCGAAAGAGGTG-GTCCTTCTCGACCGGGTCCTTGACGTAGGTGTCGAT 794606 ||||| ||||| | |||||| || | || | | || ||||||| |||||| || || Sbjct 165197 GTGTCAATGGCATTGAGGAGGTGCGTGCG-CTGGGCGGGCTCCTTGATGTAGGTATCAAT 165139 Query 794607 GAGGAGCGAGTAGGTCTCTGAGTGGATGTTTTCGATGGCGATCTGGAAGCCATAAAAGCA 794666 |||||| ||||| ||||||||||||||||| || || |||||||||||| || ||||| Sbjct 165138 GAGGAGAGAGTATGTCTCTGAGTGGATGTTCTCCATCATGATCTGGAAGCCGTAGAAGCA 165079 >seq2185 Length=187320 Score = 140 bits (154), Expect = 5e-27 Identities = 221/312 (71%), Gaps = 10/312 (3%) Strand=Plus/Minus Query 2411351 TCTTGGCGCGGATGACCTCGTCGCAATCGTCGAGATCAATCTTGGAGGCGGCCTCGCTGG 2411410 ||||| || | || |||||||| ||| || || ||||||||| || ||||||| Sbjct 113559 TCTTGACGACGGTGGCCTCGTCG---TCGAGCAGGTCGATCTTGGAGTTGGGGTCGCTGG 113503 Query 2411411 CGCTCATCTTGCCGTCCTTGGTGAGGCCCGGCACCAGCGGGTTGAGCAGGTGGATGCGCT 2411470 | |||||||||| ||| ||||| ||||||| ||||| | | ||| |||| Sbjct 113502 CCGACATCTTGCCGCCCTGC---AGGCCGGGCACCATGGGGTTCATGATGTGCGCCCGCT 113446 Query 2411471 TGCGGTAGCCCAGCGCCGGCAGGTGGTCGCGCGCAAAGGCAAAGATCTTGCGCTGGTCGC 2411530 ||||||||||||| |||||| || || || |||| |||||||||||| Sbjct 113445 GGCGGTAGCCCAGCTTCGGCAGCCACTCTTTGGCGGCGGTGAAGAGCTTGCGCTGGTCCA 113386 Query 2411531 GCCCGCCAAACTGGGCGTCGACGTCGAGGTGCTGCTCGTCGAGGGCCTGCATGAGCGGGT 2411590 ||||| || || |||| ||||| |||| ||||||||| ||| |||||| || ||||| Sbjct 113385 CGCCGCCGAATTGCACGTCCACGTCCAGGTACTGCTCGTCCAGGACCTGCAGGACCGGGT 113326 Query 2411591 AGACGAGGTTGCTGAGCGGCGGGTT-GCGGTCCATCTTGACCACCTGGGCGGCGGCCT-- 2411647 | | || | ||||||| ||| || || | |||||| |||| |||| |||||| Sbjct 113325 ACAGCAGCCCGGACAGCGGCGCGTTGGCCGT-CTGCTTGACGACCTCGGCGCCGGCCTTC 113267 Query 2411648 TTTGCGCCGTGC 2411659 || ||| ||||| Sbjct 113266 TTGGCGTCGTGC 113255 >seq1963 Length=539952 Score = 131 bits (144), Expect = 3e-24 Identities = 333/507 (66%), Gaps = 21/507 (4%) Strand=Plus/Plus Query 2073537 GCACTGGTCGACATAGCGCGCCGTGTCGTTAAAGACGCGGAGCATGGGCACAAGGCCGTT 2073596 || |||||||||||| || || || | ||||||||| || | |||||| | ||| || Sbjct 430249 GCCCTGGTCGACATATCGGGCAGTATTGTTAAAGACCCGCAACATGGGGGTGATGCCATT 430308 Query 2073597 GGACTCGCCGTTGGTGCCCGCCACGTAGGCGCCCGAGGCGCGCACCTTGTGCGCGGCAAA 2073656 ||| |||||| || || || | ||| | ||| | ||| || | ||| || | Sbjct 430309 GGAAGTGCCGTTAGTACCAGCGATGTATGAGCCGGTGGCACGGATACGGTGGACGTTGAG 430368 Query 2073657 GCCGATGCCGCCGGCCGCCTTGGAGATGAGCGCGCACTTTTTCAGCGTCTCGTAGATGCC 2073716 |||||| || || ||| ||||||||| | || || | || ||||| ||||||||||| Sbjct 430369 GCCGATACCTCCCGCCATCTTGGAGATCATGGCACAGGTCTTGAGCGTGTCGTAGATGCC 430428 Query 2073717 CTCGATCGAGTCGGCCTTCATGTCCAACAGAAAGCACGACGAGTTTTGCGGGCGCGCCGT 2073776 ||| || ||| ||||||| || | || |||||||| || || || | | || Sbjct 430429 CTCAATGCTGTCCTCCTTCATATCGACGAGGAAGCACGATGACAGCTGGGGCTGGGGAGT 430488 Query 2073777 GCCGGCATTGAAGAGCGTGGGCGTCGCCGCCGTGTACGACTGTTGGGACATGGCCTCGTA 2073836 ||| |||||||| | ||||||| || ||| | ||| | |||||| | ||| Sbjct 430489 GCCAGCATTGAATAATGTGGGCGAGGCGTGGGTGAAGAACTTGTTGGACATCAGGTTGTA 430548 Query 2073837 GGTGGCGAGCACGCGCGCCAGCGCGTCTTGGACGTCGGCAAACCCATAGTGGCCGATGGC 2073896 || ||| || | ||| || || || || || ||||| || Sbjct 430549 CGTCTCGATGACTC-----------TCT----CGACGTCATCTCCCCAGATGCCGACAGC 430593 Query 2073897 GACGCGCATGATCATGTACTGGGGTCGCTCGACGAC---GGCGTCGCGCACCTTGGTCAG 2073953 ||| ||||||||||||| || || ||||||||||| ||||| | ||| ||| Sbjct 430594 GACACGCATGATCATGTGTTGTGGCCGCTCGACGACTTTACCGTCG---AGCTTCAGCAG 430650 Query 2073954 GTAGGACCGACGCAGGGTCGCCAGGCCAAAGTACGAGTAGGCCAGGTCGCGCTCGTGGCG 2074013 ||| || || |||||| | ||| ||||| |||| | | ||||| || | | Sbjct 430651 GTATGAGCGCTCGAGGGTCTTGAAGCCGAAGTATTGGTAGCCGAAATCGCGGTCATAGAC 430710 Query 2074014 GATGGCGGCGTCGAGGGCCTCCTTGTG 2074040 ||||| | ||||| |||||||||| Sbjct 430711 AATGGCCGAGTCGAACTCCTCCTTGTG 430737 Score = 113 bits (124), Expect = 7e-19 Identities = 268/407 (66%), Gaps = 8/407 (2%) Strand=Plus/Plus Query 2071610 TGGTGCCCAGGTTCTGCTGGTTGCTGGTCAGGTTGACGGCGTCCTTGTGCAGCATGTAGG 2071669 |||| |||||||| | ||||||||| | |||| || ||| |||| |||||| ||| Sbjct 429849 TGGTACCCAGGTTTTTCTGGTTGCTCTTTCGGTTCGCGTGGTCTTTGTATAGCATGAAGG 429908 Query 2071670 GCGCACCCGTCTCGATCTGCGCCGTGACGATGGCCGACCA-AATTTGGCGCGCGGGCACC 2071728 | || |||||| |||| ||| || |||||| |||| || || | || | | Sbjct 429909 GGTTGCCAGTCTCGGTCTGAGCCTCGAGGATGGCGTACCACAACTT----CTGGGCCTTC 429964 Query 2071729 GAGGTCCT-CG--CGCGGCCCTNNNNNNNNNNNNNNNNNNAGAGGGCGTCAAAGGCGGCG 2071785 |||| | || ||||||||| |||| || ||||| | | Sbjct 429965 ATGGTCTTGCGACCGCGGCCCTCCTTCTCGTACTTCTCGTAGAGAGCCTCAAACTCCTCA 430024 Query 2071786 CCGTGGCACTCGTGCAGGCCGGGCGCCTCGGACGGGCAAAAGAGCGACCAGTCGCCGCCA 2071845 |||| ||| ||| || || || ||| ||||| | ||| | ||| |||||| Sbjct 430025 CCGTAGCAGTCGGCAAGTCCAGGGCACTCATTGGGGCACATGAGGGTCCACTCGCCGTTC 430084 Query 2071846 GTCACCACGCGGCGCATAAACAGGTCGCACGTCCACAGGCCGTAAAAGAGATCGCGCGCC 2071905 || | || || ||| ||||| ||| |||| || | || ||||| || || Sbjct 430085 TTCTCGACCCGCTTCATGAACAGATCGGGGATCCAGAGTGCAAGGAAAAGATCACGGGCT 430144 Query 2071906 CGGTTCTCCTCCTTGCCGTGGTTCTTTTTCAGGTCGAGCCAGTCGACGAGGTCGGCGTGC 2071965 ||| |||||||||||||||||||||| |||||| || | |||| || ||| |||||| Sbjct 430145 CGGATCTCCTCCTTGCCGTGGTTCTTGCGCAGGTCAAGAAACTCGAAGACGTCTGCGTGC 430204 Query 2071966 CACGGCTCCAGGTAGCAGGCAAAGGCGCCCTTGCGCTTGCCGCCGCC 2072012 || ||||| |||||| || ||||| || |||||| |||||| Sbjct 430205 CATGGCTCAAGGTAGATAGCGAAGGCACCGGGACGCTTGTTGCCGCC 430251 >seq300 Length=88049 Score = 120 bits (132), Expect = 5e-21 Identities = 113/144 (78%), Gaps = 0/144 (0%) Strand=Plus/Minus Query 2035612 AGGTCGACCAACCCACCCTCTTTGAGTTGATCCTCGCCGCCAACTACCTCGACATCAAGC 2035671 |||||||||| | ||||| ||| | ||||| |||||||||||| | ||||||||| Sbjct 21288 AGGTCGACCAGGAGATGCTCTTCGAGATCATCCTTGCCGCCAACTACATGGACATCAAGG 21229 Query 2035672 CCCTCCTCGATTTGGGGTGCAAGACCGTGGCCAACCTTATCAAGGGCAAGTCGCCCGAGG 2035731 | || || || | || |||||||| || ||||| | |||||||||||||| || |||| Sbjct 21228 CTCTGCTTGACGTCGGCTGCAAGACAGTCGCCAATATGATCAAGGGCAAGTCTCCTGAGG 21169 Query 2035732 ACATCCGCAAGACCTTTAACATCA 2035755 | ||||| ||||| || ||||||| Sbjct 21168 AGATCCGAAAGACATTCAACATCA 21145 >seq721 Length=27054 Score = 105 bits (116), Expect = 1e-16 Identities = 121/160 (76%), Gaps = 2/160 (1%) Strand=Plus/Minus Query 1485546 GGTCTGGATCTCGCGGGTGCCGATCGTGTTGCGCTTGTTAGTGCGC-GCCAGGCGGCCGG 1485604 |||||||||||| |||| | ||| ||| |||||| || || || || | || Sbjct 13416 GGTCTGGATCTCCCGGGAGGAGATGGTGGACTTCTTGTT-GTAGGCAGCGAGCTTGGAGG 13358 Query 1485605 CCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTTCATGATCGACATCGATT 1485664 |||||||| ||| ||| |||| |||||||||||||||||||||| ||| ||||| | Sbjct 13357 CCTCGGTGGCGACGCGCTCGAAGATGTCGTTGACAAACGAGTTCAGGATGGACATGGCAC 13298 Query 1485665 TGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCAC 1485704 ||| ||||| || ||||||||| ||||||||||| || Sbjct 13297 GGTTTGAGATACCAGTGTCGGGGTGGACCTGCTTGAGGAC 13258 >seq1298 Length=172817 Score = 96.9 bits (106), Expect = 5e-14 Identities = 96/121 (79%), Gaps = 4/121 (3%) Strand=Plus/Plus Query 2233091 GTCGCCTTTCCCACCGAGACCGTCTATGGCCTCGGCGCCGACGCG--GCGTCAGACGAGG 2233148 ||||| || ||||| || || ||||| ||||||||||| |||||| ||| || || || Sbjct 7659 GTCGCATTCCCCACAGAAACAGTCTACGGCCTCGGCGCGGACGCGACACGT-AG-CGGGG 7716 Query 2233149 CCGTACAGCGCATCTTTGACGCCAAGGGCCGACCGTCCAACAACCCGATCATCGTGCACG 2233208 | || || |||||| | |||||||||||| || || |||||||| |||||||||||| Sbjct 7717 CTGTCAAGGGCATCTACGCCGCCAAGGGCCGGCCCTCGGACAACCCGCTCATCGTGCACG 7776 Query 2233209 T 2233209 | Sbjct 7777 T 7777 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 7915992909421137