Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Diaporthe_20ampelina_20[genbank_20GCA_5F001006365.1_202015-05-13]
2,383 sequences; 47,325,858 total letters
Query= NC_022646.1
Length=101818
Score E
Sequences producing significant alignments: (Bits) Value
seq1562 147 1e-30
seq1808 132 3e-26
seq1287 116 2e-21
>seq1562
Length=24550
Score = 147 bits (162), Expect = 1e-30
Identities = 166/220 (75%), Gaps = 8/220 (4%)
Strand=Plus/Plus
Query 34765 CAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATC 34824
||| |||||||| | |||| ||||||||| ||||| ||||| || ||| |||| | ||
Sbjct 19394 CAGCACCAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCGTC 19453
Query 34825 GTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTC 34884
|| || ||||| |||||||||||||| || ||||||||| | || | || ||||||||
Sbjct 19454 CTCGAGCTGCTTGCCGGCGAAGATCAGGCGCTGCTGGTCTGGGGGGATGCCTTCCTTGTC 19513
Query 34885 GTTTATTTTTTGTTTGACGGATGCTATCGAT----TCATTGGCCTCGACATCAACGGTTA 34940
| || || ||||| || | ||||| || | ||| || |||| ||| |
Sbjct 19514 CTGGATCTTGGACTTGAC--AT--TGTCGATGGTGTCGGAAGACTCCACCTCAAGGGTGA 19569
Query 34941 TGGTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCATGAT 34980
||||||| |||||||||||||| || ||||||||||||||
Sbjct 19570 TGGTCTTGCCCGTGAGGGTCTTCACGAAGATCTGCATGAT 19609
>seq1808
Length=99283
Score = 132 bits (146), Expect = 3e-26
Identities = 157/213 (74%), Gaps = 0/213 (0%)
Strand=Plus/Plus
Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825
|| || ||||||| |||| |||||||||||||| ||||| || ||| | || ||||
Sbjct 19794 AGAACGAGGTGAAGGGTGGATTCCTTCTGAATGTTGTAGTCGGAGAGGGTACGGCCATCC 19853
Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885
|| |||||||| || || |||||||| || || ||||| | || | |||||||||||
Sbjct 19854 TCGAGTTGCTTGCCAGCAAAGATCAGGCGCTGTTGGTCAGGGGGGATACCCTCCTTGTCC 19913
Query 34886 TTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTC 34945
| || || |||||| | || | || || ||| || || | || ||||||
Sbjct 19914 TGAATCTTGGACTTGACGTTGTCAATAGTATCGGAGGACTCAACCTCGAGAGTGATGGTC 19973
Query 34946 TTTCCCGTGAGGGTCTTTACAAAGATCTGCATG 34978
|| || |||||||||||||| ||||||||||||
Sbjct 19974 TTGCCGGTGAGGGTCTTTACGAAGATCTGCATG 20006
Score = 114 bits (126), Expect = 8e-21
Identities = 153/213 (72%), Gaps = 0/213 (0%)
Strand=Plus/Plus
Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825
|| |||| ||| | ||| ||||||||||||||| ||||| || | | || | ||
Sbjct 19338 AGCACCAAGTGCAGCGTGGACTCCTTCTGAATGTTGTAGTCAGACAAAGTCCGGCCGTCT 19397
Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885
||||| ||||| || ||||| || ||||||||||||||| | || | |||||||||||
Sbjct 19398 TCCAGCTGCTTGCCAGCGAAAATGAGTCGTTGCTGGTCTGGTGGGATGCCCTCCTTGTCC 19457
Query 34886 TTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTC 34945
| || || |||||| | |||| || | ||| || || | || || |||
Sbjct 19458 TGAATCTTCGACTTGACGTTGTCAATCGTGTCCGATGACTCAACCTCGAGCGTAATAGTC 19517
Query 34946 TTTCCCGTGAGGGTCTTTACAAAGATCTGCATG 34978
|| ||||| | |||||| ||||| |||||||||
Sbjct 19518 TTCCCCGTCAAGGTCTTCACAAAAATCTGCATG 19550
Score = 113 bits (124), Expect = 3e-20
Identities = 156/216 (72%), Gaps = 8/216 (4%)
Strand=Plus/Plus
Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825
|| |||||||||| || |||||||||||||| |||||||| ||| | ||| | ||
Sbjct 19566 AGAACCAGGTGAAGTGTAGATTCCTTCTGAATGTTGTAGTCCGAGAGGGTCCGCCCGTCC 19625
Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885
|| || |||||||| || ||||||| || |||||||| | || | |||||||| ||
Sbjct 19626 TCAAGCTGCTTTCCAGCAAAGATCAAGCGCTGCTGGTCAGGAGGGATGCCCTCCTTATCC 19685
Query 34886 TTTATTTTTTGTTTGACGGATGCTATCGAT----TCATTGGCCTCGACATCAACGGTTAT 34941
| || || || || || | ||||| ||| | ||| || || | ||| ||
Sbjct 19686 TGGATCTTCGACTTCAC--AT--TGTCGATAGTATCAGAAGACTCAACCTCGAGGGTAAT 19741
Query 34942 GGTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977
|||||| || ||||| ||||| || |||||||||||
Sbjct 19742 GGTCTTGCCAGTGAGAGTCTTGACGAAGATCTGCAT 19777
>seq1287
Length=86926
Score = 116 bits (128), Expect = 2e-21
Identities = 135/182 (74%), Gaps = 0/182 (0%)
Strand=Plus/Plus
Query 34788 CCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAGA 34847
||||||| ||||| ||||| || ||| |||| |||| || || ||||| ||||||||||
Sbjct 66491 CCTTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCATCCTCAAGCTGCTTGCCGGCGAAGA 66550
Query 34848 TCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGATG 34907
||| ||| ||||||||| | || | ||||||||||| | || || ||||||
Sbjct 66551 TCAATCGCTGCTGGTCTGGGGGAATTCCCTCCTTGTCCTGGATCTTGGACTTGACGTTGT 66610
Query 34908 CTATCGATTCATTGGCCTCGACATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTACAA 34967
| || | || || ||| || |||| ||| || ||||| ||||| |||||||| || |
Sbjct 66611 CGATGGTGTCGGAGGACTCCACCTCAAGGGTGATAGTCTTGCCCGTCAGGGTCTTCACGA 66670
Query 34968 AG 34969
||
Sbjct 66671 AG 66672
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 325683340965077
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |