Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Diaporthe_20ampelina_20[genbank_20GCA_5F001006365.1_202015-05-13] 2,383 sequences; 47,325,858 total letters Query= NC_023177.1 Length=124688 Score E Sequences producing significant alignments: (Bits) Value seq1808 89.7 4e-13 >seq1808 Length=99283 Score = 89.7 bits (98), Expect = 4e-13 Identities = 145/209 (69%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 107556 ATGCAAATTTTTGTCAAAACTTTAACAGGCAAAACCATTACCGTCGAAACGGAGGCTGGC 107615 ||||| || || ||||| ||| | || ||||| ||||||||| |||| ||| || Sbjct 19777 ATGCAGATCTTCGTCAAGACTCTCACTGGCAAGACCATTACCCTCGAGGTTGAGTCTTCT 19718 Query 107616 GATACTGTCGGCCAGGTAAAACAAAAGATTGCCGATAAAGAAGGCGTGCCCGTGGATCAG 107675 |||||| ||| | | || || ||||| ||||| || ||| | || || ||| Sbjct 19717 GATACTATCGACAATGTGAAGTCGAAGATCCAGGATAAGGAGGGCATCCCTCCTGACCAG 19658 Query 107676 CAGAGACTTATTTATGCGGGTAAACAGCTGGAGGACGCCAAAACAATGGCGGACTACAAC 107735 ||| | | || | ||| || || ||||| ||||||| || | ||||||||||| Sbjct 19657 CAGCGCTTGATCTTTGCTGGAAAGCAGCTTGAGGACGGGCGGACCCTCTCGGACTACAAC 19598 Query 107736 ATTCAAAAGGAGTCTACGTTGCACATGGT 107764 ||||| ||||| ||||| | ||| |||| Sbjct 19597 ATTCAGAAGGAATCTACACTTCACCTGGT 19569 Score = 82.4 bits (90), Expect = 6e-11 Identities = 144/210 (69%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 107556 ATGCAAATTTTTGTCAAAACTTTAACAGGCAAAACCATTACCGTCGAAACGGAGGCTGGC 107615 ||||| |||||||| || || || || || || || ||||| |||| ||| | Sbjct 19549 ATGCAGATTTTTGTGAAGACCTTGACGGGGAAGACTATTACGCTCGAGGTTGAGTCATCG 19490 Query 107616 GATACTGTCGGCCAGGTAAAACAAAAGATTGCCGATAAAGAAGGCGTGCCCGTGGATCAG 107675 || || | | | | || || |||||| || || || ||| | || || ||| Sbjct 19489 GACACGATTGACAACGTCAAGTCGAAGATTCAGGACAAGGAGGGCATCCCACCAGACCAG 19430 Query 107676 CAGAGACTTATTTATGCGGGTAAACAGCTGGAGGACGCCAAAACAATGGCGGACTACAAC 107735 || |||| |||| || || || |||||||| |||| | || || | ||||||||| Sbjct 19429 CAACGACTCATTTTCGCTGGCAAGCAGCTGGAAGACGGCCGGACTTTGTCTGACTACAAC 19370 Query 107736 ATTCAAAAGGAGTCTACGTTGCACATGGTG 107765 ||||| |||||||| ||| ||||| ||||| Sbjct 19369 ATTCAGAAGGAGTCCACGCTGCACTTGGTG 19340 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 398865215495887