Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Diaporthe_20ampelina_20[genbank_20GCA_5F001006365.1_202015-05-13] 2,383 sequences; 47,325,858 total letters Query= NC_024625.1 Length=151109 Score E Sequences producing significant alignments: (Bits) Value seq1963 390 1e-103 seq1786 150 2e-31 seq1562 143 3e-29 seq1808 113 4e-20 seq1287 96.9 3e-15 >seq1963 Length=539952 Score = 390 bits (432), Expect = 1e-103 Identities = 1156/1757 (66%), Gaps = 59/1757 (3%) Strand=Plus/Plus Query 148053 GACTGGCTCTGGTCAATGAACGCGCCACGGTCAGCGGCCATTT---CAATGAGTCGCTTT 148109 |||||| |||||| ||||| || ||||||||||| ||||| | |||| |||| | Sbjct 428993 GACTGGGACTGGTCGATGAATGCACCACGGTCAGCAGCCATCTGCACAAT-AGTCCTCTG 429051 Query 148110 ATCTTCATCTCCCAGGCCGTCTTGTACAGCCGCTTGATATGATCGGGAATGCCGTCGATG 148169 | || ||||| | ||||||||||| |||||| | | | || |||| | ||| Sbjct 429052 AGAG--ATTTCCCAAACGGTCTTGTACAGGGCCTTGATGTCAGCCGGGATGCTGGGAATG 429109 Query 148170 CGCTGCACCGAGCCGCGGTGCGCAAAAATCTGATTGCGCATTTCGTCCGTGTATAGGTTG 148229 ||| | || || | || | || | || ||| | || | | | | | Sbjct 429110 TTCTGTATGGAACCATCCTCGGCGATGATACGGTTCTTCATGGCCTCAGACCACAAGCCG 429169 Query 148230 AGCTCGATCAGGTCATCGATCAGATACTGATTCACCACCTGAAACTCGCCGGCGAGCACG 148289 ||||| ||| ||| || || | | || || ||||| |||||||| |||||||| Sbjct 429170 AGCTCTGTCAAGTCCCTGAGAAGCCAAGGGTTGACAACCTGGAACTCGCCAGCGAGCACA 429229 Query 148290 CGCCGCAGATACACGTTGCTCGTAAACGGTTCAAACGACTCGTTGTTGCCCAAAATCTGC 148349 || ||| | || | |||| || | || || || ||||||||||||||| |||||| Sbjct 429230 CGTCGCTGGTAGATGTTGGAGGTGTATGGCTCGAAGCACTCGTTGTTGCCCAGGATCTGC 429289 Query 148350 GCGGTCGTTGCCGTGGGCATGTACGCTACCAGCAGCGAGTTGCGCAAACCGCGATTTTTT 148409 | ||| | ||| |||||||| ||| | | || |||||| | |||| | || Sbjct 429290 GAGGTGGATGCAGTGGGCATTGGCGCCAGTAACAAGCTGTTGCGGACACCGGTCTCCTTG 429349 Query 148410 ATTTTGCGCTTCAGAGCCGCCCAGTCCCAGAGCGGCGACGGTGTCACGTTCCACATGTCG 148469 || ||| ||| || || ||||||||||||||| || || | || |||||||||||| Sbjct 429350 ATCTTGTCCTTGAGGGCTTCCCAGTCCCAGAGCGCGGATGGCTTGACATTCCACATGTCG 429409 Query 148470 TACTGCAGAATGCCGCGGCTAG-CGGGGCTGCCCTCGTACGAGCTGTACGGTCCGTGCGC 148528 |||| || ||||| | | || | || ||||||||||||| ||||||| || | | | Sbjct 429410 AACTGAAGGATGCC-CTGTGAGACCGGACTGCCCTCGTACGTCTTGTACGGGCCCTCCAC 429468 Query 148529 CGCCGCCAGTTCGCAGCTCGCCTCGAGCGCGCCGTAGTAAATCGTCTCGGCAATTTGCCT 148588 | || | |||| || || || ||| ||| || |||||| || ||| | Sbjct 429469 CTTGGCAATATCGCTTGATGCGGTAAGAGCAGCGTGGTAGATAGTCTCGAAGATCTGCTT 429528 Query 148589 GTTGAGCAGCGCCGCCGACTCGCTT---TCGTACGGCATACGCAGCCGCACAAACGCGTC 148645 ||| ||| | | | | |||| ||| | |||||||| || || ||||| || Sbjct 429529 GTTCAGCT-CACGGGC--CTCGGGGGAGTCGAAAGGCATACGAAGGGCCAAGAACGCATC 429585 Query 148646 GGCAAGGCCCTGTACGCCCACGCCAATGGGCCGGTGTTTAATGTTGGAGAGGCGCGCGCT 148705 ||||| ||||| || || || ||||| || || ||| |||||| | | || Sbjct 429586 AGCAAGACCCTGGACACCAACACCAATCGGTCGATGTCGCATGTTGCTGTTGTAGGCCTC 429645 Query 148706 CTCGAGCGGATAGTGGTTGCGGTCGATGATCTTGTCAAGATTGCGCACCACCACCTTTGT 148765 || || || ||||||||| || |||||||||| || ||||| || || |||| || Sbjct 429646 CTTGACTGGGTAGTGGTTGACATCAATGATCTTGTTCAGGTTGCGGACGACGACCTGGGT 429705 Query 148766 AATTCTGCGCAGCAATTCAAAATCGTAC------TTGTCAT---CTACGATGCATCGGTT 148816 || ||| | || || | ||| ||||||| | ||| | | ||| Sbjct 429706 AACCTCATGCAACTGTTGGAAGTTGTAGCAGTTGTTGTCATAGTCCACG-TACGCCGG-- 429762 Query 148817 CACGGCGATAGAGGCTAGATTGCACACGGCCGTCTCATCCGGGGCGCTGTACTCTACGAT 148876 || ||| |||||||| || ||||| || || |||||| ||||| | |||||| | ||| Sbjct 429763 CAGGGCAATAGAGGCCAGGTTGCAAACAGCGACCTCATCAGGGGCACAGTACTCGATGAT 429822 Query 148877 CTCGGCGCACAGATT---GCTGCATTTGATCACGCCCACGTTCTTTTGATTGCTCTTGCT 148933 ||| | ||| || || ||||| || | |||| ||| || || |||||||| | Sbjct 429823 CTCAGTGCAGAGGTTTGAGCTGCGGATGGTA---CCCAGGTTTTTCTGGTTGCTCTTTCG 429879 Query 148934 GTTGCACGCG-TCCTTGTACAGCATGTACGGTCCGCCAGTTTCCACCTGCGTTTCCACTA 148992 ||| | || | || ||||| |||||| | || |||||| || ||| | || | | Sbjct 429880 GTT-CGCGTGGTCTTTGTATAGCATGAAGGGGTTGCCAGTCTCGGTCTGAGCCTCGAGGA 429938 Query 148993 TGA---ACCGATGCAGGTCCTGCGCGCGCA----CTTGCTGCTCGTAGCGACCCTCCTGC 149045 || ||| || | ||| || || ||||| | ||| ||||||| | Sbjct 429939 TGGCGTACCA---CAACTTCTGGGCCTTCATGGTCTTGCGACC----GCGGCCCTCCTTC 429991 Query 149046 TCGTA--TAAAGTATACAGCCGCTCGAACGCCTCGCCGTAGCAATCGTCGAGACCGGGGC 149103 ||||| | ||| | |||| || ||| |||| |||||||| ||| | || || |||| Sbjct 429992 TCGTACTTCTCGTAGAGAGCC--TCAAACTCCTCACCGTAGCAGTCGGCAAGTCCAGGGC 430049 Query 149104 ACTTGTGCGGGCACATGAGCGACCACACGCCGTCCGCGTACACGCGCTTCATAAACAGAT 149163 ||| | ||||||||||| | |||| |||||| | | || |||||||| ||||||| Sbjct 430050 ACTCATTGGGGCACATGAGGGTCCACTCGCCGTTCTTCTCGACCCGCTTCATGAACAGAT 430109 Query 149164 CGGGCACCCAGAGCGCGTACATGAGGTCGCGCGCCTTGCAGTCTTCGGCGCCCATGTTGC 149223 |||| | |||||| || | || || || || | || || ||| ||| Sbjct 430110 CGGGGATCCAGAGTGCAAGGAAAAGATCACGGGCTCGGATCTCCTCCTTGCCGTGGTTCT 430169 Query 149224 GGCGCAGGTTGAGCACGCTGAATATGTCCGCGTGCCACGGCTCAATGTACACCGCGAGCG 149283 |||||||| || | ||| | ||| |||||||| ||||||| ||| | |||| | Sbjct 430170 TGCGCAGGTCAAGAAACTCGAAGACGTCTGCGTGCCATGGCTCAAGGTAGATAGCGAAGG 430229 Query 149284 CGCCCTTGCGCTTG---CCGCCCTGGTCGACGTGGCGCACCATGTTGTTAAACACTCGAA 149340 | || |||||| |||||||||||||| | || | | |||||||| || || | Sbjct 430230 CACCGGGACGCTTGTTGCCGCCCTGGTCGACATATCGGGCAGTATTGTTAAAGACCCGCA 430289 Query 149341 CCATAGGTTCAATGCCACTGGCAGTGCCGTTAGTAG-AGCTAATGCGACTGCCGCGCGCT 149399 ||| || |||||| ||| ||||||||||||| ||| | || |||| || Sbjct 430290 ACATGGGGGTGATGCCATTGGAAGTGCCGTTAGTACCAGCGA-TGTATGAGCCGGTGGCA 430348 Query 149400 CGCACTTTGTGCACGTTGACGCCGATGCCGCC-GCCGTACTTTGAGATGGCCGCGCAGTC 149458 || | ||| ||||||| |||||| || || ||| | ||| ||||| || ||| Sbjct 430349 CGGATACGGTGGACGTTGAGGCCGATACCTCCCGCCAT-CTTGGAGATCATGGCACAGGT 430407 Query 149459 GCCGAGCGTCGAGTAGATGCCCTCGATGCTGTCGCGCTTCATGGTCAGCAGAAAGCACGA 149518 |||||| |||||||||||| |||||||| |||||| | || |||||||| Sbjct 430408 CTTGAGCGTGTCGTAGATGCCCTCAATGCTGTCCTCCTTCATATCGACGAGGAAGCACGA 430467 Query 149519 GCACATTTGCGGAAAACGCGTGCCGGCCGCGAACATGGTGGGGCTGGCGTGTGTAAAATA 149578 ||| || || | ||||| || ||| | ||||| |||||| || || | Sbjct 430468 TGACAGCTGGGGCTGGGGAGTGCCAGCATTGAATAATGTGGGCGAGGCGTGGGTGAAGAA 430527 Query 149579 TTTCTGGCTCATCATCTCGTACGACTCGAGCACGCGGTCCATGTCATCGCCATGGATGCC 149638 || | | ||||| | ||||| ||||| || | || | |||||| || |||||| Sbjct 430528 CTTGTTGGACATCAGGTTGTACGTCTCGATGACTCTCTCGACGTCATCTCCCCAGATGCC 430587 Query 149639 TATGGCGACGCGCATCAGCATATGCTGCGGTCGCTCCGCCACTTTGTTTCCAATTTTGAG 149698 | ||||| ||||| | ||| || || || ||||| | ||||| | | || || Sbjct 430588 GACAGCGACACGCATGATCATGTGTTGTGGCCGCTCGACGACTTTACCGTCGAGCTTCAG 430647 Query 149699 CAAGTAGCCGTTTTCTAGTGTCTTGTAGCCAAAGTACTTGTAGTCAAAGTCGCGGCCGTG 149758 || ||| | || || |||||| |||| ||||| | |||| | || |||||| | | Sbjct 430648 CAGGTATGAGCGCTCGAGGGTCTTGAAGCCGAAGTATTGGTAGCCGAAATCGCGGTCATA 430707 Query 149759 GTCAATGGCGGCGTCGA 149775 | ||||||| | ||||| Sbjct 430708 GACAATGGCCGAGTCGA 430724 >seq1786 Length=271448 Score = 150 bits (166), Expect = 2e-31 Identities = 352/525 (67%), Gaps = 27/525 (5%) Strand=Plus/Minus Query 120351 CTTGTACTCGCCGACGCGTTTCTCAAAAAAGTTTGTTTTGCCCTCCATCGAAATGTTGTT 120410 || ||| || ||||| || ||||| || ||||| || ||||| | | || ||||| | Sbjct 165767 CTGGTAGTCACCGACACGCTTCTCGAAGAAGTTGGTCTTGCCACCGAGGGAGATGTTCTC 165708 Query 120411 CATAAACTCGAACGGGTTGCTCGCGTT--AAAGTATTTCGGCTGGCCCAACTGTACGAGC 120468 ||| || ||||| |||||| || || ||| | ||| | ||||| || || Sbjct 165707 CATGAAGTCGAAGGGGTTGGACGACTTGTAAACCTTGTCG--TTGCCCAGGGCGACCAGG 165650 Query 120469 AGTCGGTCCGCTACAAACTCAATGTACTCGCACATGGACTGCGCGTTCATGCCCAGCAAC 120528 || ||||| || ||||| || ||||||| |||| | | ||||||||| || | Sbjct 165649 AGGCGGTCGGCGACAAATTCGATGTACTGCTTCATGAGGTTAGAGTTCATGCCGAGGAGG 165590 Query 120529 GCCACCGGCAACGCCGACGTGAAAAACTCCTTCTCAATGTCCACCGCCTCCTTGAACATG 120588 || |||| ||| || ||||| |||||||| ||| | || ||||| ||| ||| Sbjct 165589 GCACATGGCAGAGCCTCGGTCAAAAATTCCTTCTCGATGGCGACAGCCTCGGTGATGATG 165530 Query 120589 GCGAGCATAGTGTGGCCGGGCATCTTG--TGTTCGATGC--GCGTTCGGTAGTACAGG-- 120642 | ||| || || |||| || ||| | | | | | || || |||| Sbjct 165529 TCC---------TGGACGCGCTGCTTGCTTGGTCGGTTCTTGAGGTGGG-AGAACAGCAG 165480 Query 120643 -CACGCAAAGTCCGTGTGCAGGCCCTCGTCGCGCGATATCAGCTCGTTGCTAAACGTCAG 120701 || || ||||| |||||||| ||||| || || || ||||| |||||| || ||||| Sbjct 165479 ACAGGCGAAGTCGGTGTGCAGACCCTCATCACGAGAGATCAGTTCGTTGGAGAAGGTCAG 165420 Query 120702 GCCGGGCATGATGCCTTTCGTCTTGATGTAGAATATGGCGGCAAAGCTGCCCGAAAAGAA 120761 ||| ||||||| || | |||||| |||| |||| || || ||| ||||| Sbjct 165419 GCCAGGCATGAGCCCACGCTTCTTGAGCCAGAAGATGGAAGCGAATGCGCCGCTGAAGAA 165360 Query 120762 CACGCCCTCCACGATGGCAAAGGCGACCATGCGCTCGGCCAACGTCGCCGTCTTGCTGTC 120821 | ||||| ||| ||||||||| |||| |||| ||| | || | | | || ||| Sbjct 165359 GATACCCTCGACGGCGGCAAAGGCAACCAGTCGCTGGGCATAGGTGGAC---TCGCGGTC 165303 Query 120822 ---GATCCACTTCATGGCCCACTCGGCCTTTTTGCGCACGCACGG 120863 ||||||||||| ||||| |||||||| ||||| | ||| || Sbjct 165302 CTGGATCCACTTCAGAGCCCAGTCGGCCTTCTTGCGGATGCAGGG 165258 >seq1562 Length=24550 Score = 143 bits (158), Expect = 3e-29 Identities = 151/199 (76%), Gaps = 0/199 (0%) Strand=Plus/Plus Query 133463 GGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGAGTCCTCGAGCTGCTTGCC 133522 ||||||||| ||||| || ||||| ||| | ||| |||||||||||||||||| Sbjct 19409 GGTGGACTCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCGTCCTCGAGCTGCTTGCC 19468 Query 133523 CGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTT 133582 ||| | || || ||||||||||| || ||||||||||||||||| |||||| ||| Sbjct 19469 GGCGAAGATCAGGCGCTGCTGGTCTGGGGGGATGCCTTCCTTGTCCTGGATCTTGGACTT 19528 Query 133583 GAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGT 133642 || | || | ||||||| | |||||| || | ||||| ||| ||||| || || || Sbjct 19529 GACATTGTCGATGGTGTCGGAAGACTCCACCTCAAGGGTGATGGTCTTGCCCGTGAGGGT 19588 Query 133643 TTTTACGAAAATCTGCATG 133661 || ||||| ||||||||| Sbjct 19589 CTTCACGAAGATCTGCATG 19607 >seq1808 Length=99283 Score = 113 bits (124), Expect = 4e-20 Identities = 148/203 (73%), Gaps = 4/203 (2%) Strand=Plus/Plus Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGT--GGACGAGTCCTCGAGCTGCTTGC 133521 |||||||| ||||| || ||||| || || || || || || || |||||||||| Sbjct 19353 GTGGACTCCTTCTGAATGTTGTAGTCAGACAAAGTCCGGCCG--TCTTCCAGCTGCTTGC 19410 Query 133522 CCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCT 133581 | ||| ||||||| || |||||||| || |||||||| |||||||| ||||| || Sbjct 19411 CAGCGAAAATGAGTCGTTGCTGGTCTGGTGGGATGCCCTCCTTGTCCTGAATCTTCGACT 19470 Query 133582 TGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAG 133641 ||| | |||| |||||| | | ||| || |||| || | || || || |||| | Sbjct 19471 TGACGTTGTCAATCGTGTCCGATGACTCAACCTCGAGCGTAATAGTCTTCCCCGTCAAGG 19530 Query 133642 TTTTTACGAAAATCTGCATGGCT 133664 | || || |||||||||||| || Sbjct 19531 TCTTCACAAAAATCTGCATGCCT 19553 Score = 93.3 bits (102), Expect = 4e-14 Identities = 114/156 (73%), Gaps = 0/156 (0%) Strand=Plus/Plus Query 133505 GTCCTCGAGCTGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTT 133564 |||||| |||||||| || || | || | ||||||||||| ||||||||||| ||||| Sbjct 19622 GTCCTCAAGCTGCTTTCCAGCAAAGATCAAGCGCTGCTGGTCAGGAGGGATGCCCTCCTT 19681 Query 133565 GTCGGTGATCTTTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGAC 133624 || |||||| ||| | | || | || || | | ||| || |||| ||| | Sbjct 19682 ATCCTGGATCTTCGACTTCACATTGTCGATAGTATCAGAAGACTCAACCTCGAGGGTAAT 19741 Query 133625 GGTTTTGCCGGTCAGAGTTTTTACGAAAATCTGCAT 133660 ||| ||||| || ||||| || ||||| |||||||| Sbjct 19742 GGTCTTGCCAGTGAGAGTCTTGACGAAGATCTGCAT 19777 >seq1287 Length=86926 Score = 96.9 bits (106), Expect = 3e-15 Identities = 109/146 (75%), Gaps = 0/146 (0%) Strand=Plus/Plus Query 133506 TCCTCGAGCTGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTG 133565 ||||| ||||||||||| ||| | || | ||||||||||| || || || || |||||| Sbjct 66526 TCCTCAAGCTGCTTGCCGGCGAAGATCAATCGCTGCTGGTCTGGGGGAATTCCCTCCTTG 66585 Query 133566 TCGGTGATCTTTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACG 133625 || |||||| ||||| | || | ||||||| || |||||| || | ||||| Sbjct 66586 TCCTGGATCTTGGACTTGACGTTGTCGATGGTGTCGGAGGACTCCACCTCAAGGGTGATA 66645 Query 133626 GTTTTGCCGGTCAGAGTTTTTACGAA 133651 || ||||| ||||| || || ||||| Sbjct 66646 GTCTTGCCCGTCAGGGTCTTCACGAA 66671 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 483406400102920