Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Diaporthe_20ampelina_20[genbank_20GCA_5F001006365.1_202015-05-13] 2,383 sequences; 47,325,858 total letters Query= NC_026268.1 Length=139132 Score E Sequences producing significant alignments: (Bits) Value seq1963 91.5 1e-13 >seq1963 Length=539952 Score = 91.5 bits (100), Expect = 1e-13 Identities = 181/268 (68%), Gaps = 0/268 (0%) Strand=Plus/Plus Query 138142 ACGTTGAGGCCGATGCCGCCTCCGTGTTTAGATATCATGGCACAATCGTTGAGAGTTCTA 138201 |||||||||||||| || || | || || ||||||||||| ||||| || Sbjct 430361 ACGTTGAGGCCGATACCTCCCGCCATCTTGGAGATCATGGCACAGGTCTTGAGCGTGTCG 430420 Query 138202 TAGATGCCGTTTATGCTGTCTTCCTGGATGTTGAGTAGATAACACGACGACATTTGAGGC 138261 |||||||| | |||||||| |||| || | || || | ||||| |||| || ||| Sbjct 430421 TAGATGCCCTCAATGCTGTCCTCCTTCATATCGACGAGGAAGCACGATGACAGCTGGGGC 430480 Query 138262 ATTTTCATGCCAGCCGAGAATAGAGTGGGACTAGCGTGGGTAAACATTTTCGAGCGCATC 138321 ||||||| ||||| ||||| |||||||| || | || | |||| Sbjct 430481 TGGGGAGTGCCAGCATTGAATAATGTGGGCGAGGCGTGGGTGAAGAACTTGTTGGACATC 430540 Query 138322 AATCTATATGACTCGATCGCACTCTCGATATCATCACCATGAATCTGAAGAGCGACACGC 138381 | | || | |||||| | ||||||| ||||| || || | |||||||||| Sbjct 430541 AGGTTGTACGTCTCGATGACTCTCTCGACGTCATCTCCCCAGATGCCGACAGCGACACGC 430600 Query 138382 ATCAGCATGTGTTGAGGTCTCTCGACGA 138409 || | ||||||||| || | |||||||| Sbjct 430601 ATGATCATGTGTTGTGGCCGCTCGACGA 430628 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 445081141750560