Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Diaporthe_20ampelina_20[genbank_20GCA_5F001006365.1_202015-05-13] 2,383 sequences; 47,325,858 total letters Query= NC_026421.1 Length=182380 Score E Sequences producing significant alignments: (Bits) Value seq1540 145 9e-30 >seq1540 Length=209369 Score = 145 bits (160), Expect = 9e-30 Identities = 277/402 (69%), Gaps = 12/402 (3%) Strand=Plus/Plus Query 147106 ACGTAAAACTGGCACAGGATGTGGCACGGCGGCAGCGCCATGGCGGGCAGGTCCGCGGGG 147165 ||||| ||||| | ||||||||||||||||||||||| |||||| |||||| Sbjct 103456 ACGTAGAACTGCGCGAACATGTGGCACGGCGGCAGCGCCATCTTCTTCAGGTCGGCGGGG 103515 Query 147166 TTCCAGGCCGAGACCACCAGCCGCCTGCTCTCGGGGTTCCTCTTAATCTCTTCGATAACC 147225 ||||| || | | | |||| | | |||||| || | | || | ||| Sbjct 103516 TTCCACGCGCTCATGATGATGCGCCGGTCGTACGGGTTCGTCCTGAGCTTGTGGAT---- 103571 Query 147226 CACCTC----AGCTGGTCCACGCCCTGGCCCCCGTAGTTTGTCC-CGCAGTCCACGTACC 147280 |||||| |||||||| |||||||||||| ||||| | || ||| ||| |||||| Sbjct 103572 CACCTCGGCGAGCTGGTCGACGCCCTGGCCCGTGTAGTCGGCCCTCGC-GTCGACGTACT 103630 Query 147281 TGGCCCCAAAGTGCCTCCACTGGAAGCCGTACACTGGCCCCAGGTCGCCGGGCTTTCTGT 147340 |||||| ||||| | ||||||||| ||||| || || ||||||||||| |||| | || Sbjct 103631 CGGCCCCGAAGTGGCGCCACTGGAACCCGTAGACGGGGCCCAGGTCGCCCGGCTCGCGGT 103690 Query 147341 GCGAGAAGCCCG-CCCGCTTGAGAAACTCGGGGGACCCGTGGGCGTCCCAGATGCCCACT 147399 | | |||||| | | | |||| ||||| | || |||| | |||||||||| || Sbjct 103691 G-GCCTAGCCCGACGCTGTCGAGATACTCGCGCGAGCCGTTGCCGTCCCAGATCTTGACG 103749 Query 147400 CCCTTGGCGGAGAGCTCCTTAGAGTCCGTGGAGCCCCGGATGAACCAGAGCAGCTCCTCC 147459 |||| | |||||| || || |||| |||||||| |||||||| | Sbjct 103750 CCCTGCTCCGAGAGCGAAAGCGACGAGGTCTCGCCCGATATGAACCACAGCAGCTCGGCG 103809 Query 147460 AAAACCCCCCTCCAAAAGACCCTCTTGGTGGTCAGCAGGGGG 147501 | ||| || || ||||| | ||| ||||| || || ||| Sbjct 103810 AGCACCGCCTTCTGGAAGACGCGCTTTGTGGTAAGGAGCGGG 103851 Score = 140 bits (154), Expect = 4e-28 Identities = 160/215 (74%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 146872 ATCTTGAGCTTGGGGAAGGGTCGGGGGTTCCTGGCCAGCTGAATTTTCAGGGGCTCCACG 146931 |||| ||||| |||||| || || | ||| ||||||| | | |||| || ||| Sbjct 103156 ATCTCGAGCTCGGGGAACTCGCGCGGCTCCCTCTCCAGCTGCACCCTGAGGGCATCGACG 103215 Query 146932 TGGTTGAGGTAGACGTGCGCGTCCCCCAGGGTGTGCACAAAGTCCCCCGGCTTAAGGCCG 146991 |||| ||||||||||||||| |||| | |||| | | |||||| | ||| || Sbjct 103216 TGGTCCGCGTAGACGTGCGCGTCGCCCATGACGTGCGTGAGGCTCCCCGGGATGAGGTCG 103275 Query 146992 GTCACGTGGGCCACCATGTAGGTGAGCAGCGAGTAGCTGGCTATGTTGAAGGGGACCCCC 147051 |||||| || | ||||| || |||||||||||||| || |||||||| || || ||| Sbjct 103276 CACACGTGCGCGATCATGTGTGTCAGCAGCGAGTAGCTCGCGATGTTGAACGGCACGCCC 103335 Query 147052 AGGCCCATGTCCCCCGACCTCTGGTACAGCTGGCA 147086 ||||||||||| | || | ||||||||||||||| Sbjct 103336 AGGCCCATGTCGCAGGAGCGCTGGTACAGCTGGCA 103370 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 583470619351200