Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Diaporthe_20ampelina_20[genbank_20GCA_5F001006365.1_202015-05-13] 2,383 sequences; 47,325,858 total letters Query= NC_027213.1 Length=214699 Score E Sequences producing significant alignments: (Bits) Value seq1786 105 9e-18 >seq1786 Length=271448 Score = 105 bits (116), Expect = 9e-18 Identities = 251/378 (66%), Gaps = 11/378 (3%) Strand=Plus/Minus Query 39452 TCTGCAACAAATTCTATGTATGTTTTCATCATTTCACAATTCATTCCTATGAGTTTAACT 39511 || || |||||||| ||||| ||||| | | | | ||||| || | ||| | | Sbjct 165643 TCGGCGACAAATTCGATGTACTGCTTCATGAGGTTAGAGTTCATGCCGAGGAGGGCACAT 165584 Query 39512 GGTAGAGCCTCCGTTAGAAACTCTTTTTCGATGTCTACGGCCTCTGTTATTATCGATGTT 39571 || |||||||| || | ||| || || |||||| | || ||||| || || ||||| Sbjct 165583 GGCAGAGCCTCGGTCAAAAATTCCTTCTCGATGGCGACAGCCTCGGTGAT----GATGTC 165528 Query 39572 ----ACTACCTCATCACTCGGTGGATGCAATAAATGTTTAAACATTAAGCAGGCGAAGTC 39627 || || | || ||| | | | | || |||| | ||||||||||| Sbjct 165527 CTGGACGCGCTGCTTGCTTGGTCGGTTCTTGAGGTGGGAGAACAGCAGACAGGCGAAGTC 165468 Query 39628 ACAATGTAGGCCCTCATCTCTACTAATTAATTCGTTAGAAAATGTGAGTCCAGGCATTAG 39687 || || |||||||| | | || | |||||| || || || || |||||||| || Sbjct 165467 GGTGTGCAGACCCTCATCACGAGAGATCAGTTCGTTGGAGAAGGTCAGGCCAGGCATGAG 165408 Query 39688 ACCACGCTTTTTGAGCCAAAATATGGCAGCAAAAGATCCAGAAAAGAAGATGCCTTCTAC 39747 |||||||| |||||||| || |||| ||| || | || |||||||| || || || Sbjct 165407 CCCACGCTTCTTGAGCCAGAAGATGGAAGCGAATGCGCCGCTGAAGAAGATACCCTCGAC 165348 Query 39748 TGCTGCAAATGCAACAAGTCTCTCTCCGTAACTTGTATC---ATTATGTATCCACTTCTG 39804 || ||||| ||||| |||| || | || | | || | || ||||||||| | Sbjct 165347 GGCGGCAAAGGCAACCAGTCGCTGGGCATAGGTGGACTCGCGGTCCTGGATCCACTTCAG 165288 Query 39805 TGCCCAATCAGCTTTCTT 39822 ||||| || || ||||| Sbjct 165287 AGCCCAGTCGGCCTTCTT 165270 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 686888338704120